Phalacrocorax carbo (great cormorant): 104043265
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Entry
104043265 CDS
T08596
Symbol
CHD1L
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104043265 (CHD1L)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104043265 (CHD1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
104043265
NCBI-ProteinID:
XP_009501148
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MGLGKTCQTISLLLYLTKKLANKEKFLILCPLSVLSNWKEELERFAPGLSFVTYIGSKEE
RPKLQKNLKEQSHFGVLLTTYEICLKDAAFLKPFNWAALIVDEAHRLKNQSSLLYKTLSE
FSVGFSLLLTGTPIQNSLQELYSLLSLXXXXXXXXXFVEYYQMIEKESEPAKELHNLLQP
FLLRRVKSEVAAELPKKVEVVLYHGMSALQRKYYKAILMKDLDAFESETGRKVTLQNVLI
QLRKCVAHPYLFNGVEPEPFEIGDHIVEASGKLCLLDKLLSFLCAGGHRVLLFSQMTQLL
DILQDYLDYRGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRD
TIEEIIYRRAASKLRLTNAIVEGGQFALGAPKPQGAAELQLSEILKFGLDKLLSSEGSTI
QDVELENILGDTKGGKWVMDVVLPREEEYEEEDTENHMYVYEGKDYSKEPSREDKKAFDQ
LLDLQKALTEETSKEGRALRNKANALLTGLREQSTRRKHLLSAEELEARRRKRQEAAAKR
ARLIEEKKAAKMEAEHKKKMAWWEANHYTSTCLPSEGSGSEEEFEEDEAGLNGDLYYEEA
DLNSIKYVMGDVTHPKAEEEDAIIVHCLDDSGRWGKGGLFTALEARSDQPRKIYEMAGKM
KDLELGGTLLFPIDDKKSRKKGQDLLALVVAQHRDRSNNLSGIKLSALEKGLKKIYLAAK
KRNATVHLPRIGYATKGFNWYGTERLIRKYLAARGIPTLIYYFPRNKGSSFASQAYSSSV
TVSKP
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttgggaagacttgtcagactatttctctacttctttatttgacaaaaaaattg
gcgaacaaagagaaatttctgatactttgtccactgtctgttctgagcaactggaaggag
gaactggagagatttgctccaggtctttcctttgtgacatacataggcagcaaggaggaa
cgacccaaactgcagaagaacctgaaagagcaatctcacttcggtgtgctcttgacaaca
tatgagatttgcctgaaagatgcagcatttctaaaaccctttaactgggctgccttgatt
gtagatgaagctcacagactgaaaaatcaaagttctctgctttacaagacactttctgag
ttctcagtgggcttcagcctgctactcacaggcacgccaatccagaacagcctccaggaa
ctgtactccttactcagccttnnnnnnnnnnnnnnnnnnnnnnnnnnntttgttgagtat
taccaaatgattgaaaaggagagtgagccagccaaagaattgcacaatcttctgcagcca
tttttgcttcgaagagtcaagtcggaggtggctgcagagctgccaaagaaggtggaagtg
gttctgtaccatggaatgtcagctctgcaaaggaagtactacaaagccattttgatgaaa
gatctagatgcatttgaaagtgaaacaggaaggaaggttacacttcagaatgtcttaatt
cagcttcggaagtgtgttgcccacccataccttttcaatggtgttgagccagaacccttt
gagattggagatcatattgttgaagccagtggcaagctgtgtttgttggataaactcctt
tcattcttgtgtgctggtggccaccgtgtcttgctcttctctcaaatgactcaactgctt
gatatcctgcaagactacctggactacagaggtggagttggcatgaacctgacagcagcg
gatacagttatttttactgatagtgattttaacccacaaaatgacttgcaagcaatagca
agagctcaccggattgggcagcacaagcctgtaaaaattatccgcctgatcggacgagat
acaattgaagaaataatctaccgaagagctgcttctaagctccggctgacaaacgccatt
gtagaagggggtcagtttgctctgggagcgcccaagcctcagggagcagcagagttacag
ctgagtgaaatcttgaaatttggcttggataaattgctgtcctctgaggggagtactata
caggatgtggagctagaaaacatccttggagatacaaaaggagggaagtgggtaatggat
gttgtgctgccacgcgaagaagagtatgaagaggaggatacagagaatcacatgtacgtg
tacgaaggcaaagattattcaaaagaacccagcagagaagacaaaaaagcatttgatcag
cttttggatcttcagaaagccttgactgaagagaccagtaaggaagggagagctctccgg
aacaaagcaaatgcccttctcacaggcctccgggaacagtcaaccaggaggaaacacttg
ttgagtgcagaggagctggaggctaggaggaggaagcgccaagaagcagcagcaaagaga
gcaaggctcattgaggaaaagaaggccgcaaaaatggaggcagagcacaagaaaaagatg
gcctggtgggaggcaaatcattacacatctacctgccttccctcagagggaagtggctct
gaggaagagtttgaggaggatgaggctgggctgaatggggatttatattatgaagaggca
gacctgaactctatcaagtacgtcatgggagatgtcacccaccccaaggcagaagaggag
gatgccatcattgtccactgcctagatgactccggccgctggggaaagggtggtttattt
acagctctggaggctcgttctgatcagccaaggaaaatatatgagatggcaggaaagatg
aaagacctggagttaggaggaaccctgttattccccattgatgataaaaaatccaggaaa
aaaggacaagacttgttggccttggttgtagctcagcaccgggatcggtccaacaacttg
tctggcattaagctgtctgctttggaaaagggcctgaagaagatttatttagcagccaag
aaaaggaatgcaacagtgcatcttccacgcattgggtatgcaacaaaaggtttcaactgg
tatggtaccgagcggctcatccgaaaatacttggcagcacggggcatccccactcttata
tactacttccctaggaataaaggctcctcctttgcttcacaagcatattcatcttcagtg
acagtctcaaaaccgtga
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