KEGG   Phalacrocorax carbo (great cormorant): 104043467
Entry
104043467         CDS       T08596                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
pcao  Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcao04131]
    104043467 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcao04147]
    104043467 (COPB2)
Membrane trafficking [BR:pcao04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104043467 (COPB2)
Exosome [BR:pcao04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104043467 (COPB2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 104043467
NCBI-ProteinID: XP_009501387
LinkDB
Position
Unknown
AA seq 906 aa
PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR
AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM
LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL
EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPEL
PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR
EEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHN
PNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKEK
KSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIAT
EESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVN
RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRR
DFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQLA
VEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAEK
DGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVN
QKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEERNLLEEAKA
FEPSGVMAPQVSTEEPVPSPKQELMKTVLQNSDQKTLLDLEDDLDNLDLEDIDTTDINLD
EEILDE
NT seq 2721 nt   +upstreamnt  +downstreamnt
cctctccgacttgatataaaacggaaactaacagcccggtccgaccgggtgaagagtgta
gacttgcatcccacagaaccatggatgttggctagcctttacaatgggagcgtctgtgtt
tggaaccatgaaacacagactctggtgaagacttttgaagtgtgtgaccttccagtgaga
gctgccaaattcgtggcaagaaagaactgggttgttacaggagctgatgacatgcaaatt
agagtttttaattataacaccttggaaagagttcacatgtttgaagcacattcagattac
attcgttgtattgctgtgcatcccacacagcctttcatactgacaagtagcgatgacatg
ctcattaagctctgggactgggataaaaaatggtcttgttctcaggtgtttgaagggcac
acccattatgtcatgcagattgtcataaacccaaaagacaacaatcagtttgccagtgcc
tctttggataggacaatcaaggtgtggcagcttggctcttcttcgcccaactttactttg
gaaggccatgagaaaggagtaaactgcattgactattacagtggaggagacaagccatac
ctcatttcaggtgcagatgaccggttggttaaaatctgggactaccagaataaaacatgt
gtacaaaccctggaaggacatgctcaaaatgtgtcgtgtgtcagcttccatcctgaattg
cctatcattatcacaggctcagaagatggaactgtacgcatttggcattcgagtacttac
cgcctggaaagtaccctcaactatggcatggagagagtgtggtgtgtggccagtttaaga
ggatccaataatgtggctttgggatatgatgaaggcagcattattgttaagcttggtcgt
gaagaacctgccatgtccatggatgcaaatggaaaaattatttgggctaaacattcagaa
gtccaacaggctaacttgaaagctatgggagatgctgagatcaaagatggagaaagattg
ccgctggctgtaaaggatatggggagctgtgaaatctatcctcagacaattcagcacaac
cctaatggacggtttgtagtagtgtgtggtgatggtgaatacatcatctacacagctatg
gctttgagaaacaagagctttggttctgcacaggagtttgtatgggcacatgattcttca
gaatacgcaatcagggagagcaacagtgttgtgaagatatttaaaaatttcaaagagaag
aagtcattcaaacctgattttggagcagaaggcatctacggtggcttcctgttgggtgtc
agatctgttaatggtttggcattctatgattgggaaaacacagaactgattcgcagaatt
gagattcagcccaagcatattttctggtctgactcgggtgagcttgtctgcattgctacg
gaagagtcattcttcattctgaaatacctatcagaaaaagttgcagcagcccaagaaaca
catgaaggtgtcactgaggatggaattgaagatgcttttgaggttcttggtgagattcag
gagattgtgaaaacaggcttgtgggtaggcgactgctttatttacaccagttctgtgaac
aggctcaactactatgttggaggagaaattgtcactatagcccatttagacaggacaatg
tatcttttggggtatatccctaaggacaaccggctttatttgggtgataaagagctgaac
attgttagctactctttgctggtctcagtgcttgaatatcaaactgctgtgatgagaaga
gatttcagtatggctgataaagttcttcccacgattccaaaagaacagagaaccagagtt
gcacattttcttgaaaaacagggcttcaaacaacaagctcttgccgtatctacagatcca
gagcatcgttttgaacttgctcttcaacttggagaattaaaaatagcctatcagcttgca
gtggaagcagagtcagaacagaaatggaagcaacttgctgagcttgccattagtaaatgc
cagtttggcttagctcaggagtgtctccaccatgcacaagactacggaggactgctgctt
ctggctacagcttcaggaaatgctaacatggtgaataagttagctgaaggagcagaaaaa
gatggcaagaacaatgttgcatttatgagctacttcctgcagggaaagcttgattcatgc
ttggaactcttgattaaaaccgggcgtctcccagaagctgcttttcttgcgcggacatac
ttgccaagccaagtttcaagggttgttaagctgtggcgggagaatctctctaaagtcaat
caaaaagctgccgagtcccttgctgatcctacagagtatgaaaatcttttccctggatta
aaggaagcttttgttgctgaagagtatgttaaacaaagtcttgccgacttgcggccagcc
agggaatacccccttgtcactccaaatgaagaaagaaacttacttgaagaggcaaaagcc
tttgagccttctggagtaatggcaccgcaggtcagtactgaagaaccagttccatctcct
aaacaagaactgatgaagacagttttgcagaattctgatcaaaagacactgctggacttg
gaagatgacttggataacttagatctggaggatattgataccacagatatcaatctggat
gaagagatcttagatgagtga

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