Phalacrocorax carbo (great cormorant): 104043554
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Entry
104043554 CDS
T08596
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104043554 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104043554 (HSPD1)
03110 Chaperones and folding catalysts [BR:
pcao03110
]
104043554 (HSPD1)
03029 Mitochondrial biogenesis [BR:
pcao03029
]
104043554 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcao04147
]
104043554 (HSPD1)
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104043554 (HSPD1)
Messenger RNA biogenesis [BR:
pcao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104043554 (HSPD1)
Chaperones and folding catalysts [BR:
pcao03110
]
Heat shock proteins
HSP60 / Chaperonin
104043554 (HSPD1)
Mitochondrial biogenesis [BR:
pcao03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104043554 (HSPD1)
Exosome [BR:
pcao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104043554 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
104043554 (HSPD1)
Exosomal proteins of breast cancer cells
104043554 (HSPD1)
Exosomal proteins of colorectal cancer cells
104043554 (HSPD1)
Exosomal proteins of bladder cancer cells
104043554 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104043554
NCBI-ProteinID:
XP_009501500
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
VSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKV
TKDGVTVAKAIDLRDKYKNIGARLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISK
GANPVEIRRGVMLAVDAIIAELKKLSKPVTTPEEIAQVATISANGDQEIGNIISDAMKKV
GRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQDAYVLISEKKISS
VQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQL
KDMAIATGGAVFGEEGLTLNVEDIQPHDFGKVGEVIVTKDDTMLLKGKGEKAQIEKRIQE
IIEQLEVTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVE
EGIVPGGGCALLRCIPALDALVPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEK
ILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEIPKEE
KEAAMGGMGGMGGGMGGGMF
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagagcgctcgccccgcacctgacgcgagcgtatgcgaaagatgtgaagttcgga
gcagatgctagagctcttatgcttcaaggagtggatcttctggcagatgctgtagctgtc
accatggggccaaagggaagaacagttattattgaacaaagctggggaagtcctaaagtg
acaaaagacggtgtgacagtagcaaaggcaattgacttaagagacaaatacaaaaatatt
ggagccaggttagttcaagacgttgccaacaatacaaatgaggaagcaggagatggtacc
actactgcaacggtacttgcgcgtgctattgccaaggaaggctttgagaagatcagcaaa
ggagctaatccagtagaaatcaggaggggggtgatgcttgcagtcgatgctatcatagct
gaactgaagaagctgtctaaacctgttacaactccagaagaaattgcacaggttgccacg
atttcagcaaacggggatcaggaaattggcaatataatctctgatgcaatgaaaaaagtt
ggacgaaagggtgtaatcactgtcaaggatggaaaaactctaaacgatgaattggaaatc
attgagggtatgaaatttgatagaggctacatctctccatattttattaatacaactaaa
gggcagaaatgtgagttccaggacgcttacgttttaatcagtgaaaagaaaatttctagt
gtacagtccatagttccagctcttgaaattgccaatgctcaccgcaaacctttggtcatt
attgctgaggatgttgatggagaagccctcagcactctagtcttgaacagactgaaggtt
ggtcttcaggttgttgctgtaaaagcaccaggttttggtgacaacaggaaaaaccagttg
aaggatatggcaatcgctactggcggtgctgtgttcggagaagagggtctgaccctaaat
gtggaagatatccagcctcatgactttggtaaagttggagaggtcattgtgacaaaagat
gacaccatgcttctaaaggggaaaggcgaaaaggctcaaattgaaaaacgtattcaagaa
attattgaacagctagaagttaccacaagtgactatgaaaaagagaaactgaatgagcgg
ttggccaaactctctgatggagtagcagtattgaaggtgggtggcaccagtgatgttgaa
gtgaatgagaagaaagacagagttactgatgccctcaatgcgacccgtgctgccgtagag
gaaggcatcgtcccaggcggtggctgtgcgttgcttcgctgcattccagcattagatgct
ttagttccagccaatgaagatcagaaaattggcattgaaataataaagagaacgctgaaa
atcccagcaatgactattgcaaagaatgcaggtgttgaaggatccctaatagttgaaaaa
atcctgcagagtccatcagaagttggctatgatgcaatgcttggggactttgtaaatatg
gtagaaaaaggaatcatagacccaacaaaggttgtgagaactgctctgatggatgctgca
ggcgtcgcgtctctcctatcaacagcagaagcagtggtgactgaaattccaaaagaagaa
aaggaggcagcgatgggaggaatgggtgggatgggtggagggatgggaggtggcatgttc
taa
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