Phalacrocorax carbo (great cormorant): 104043806
Help
Entry
104043806 CDS
T08596
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104043806 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104043806 (EXOSC9)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104043806 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH_C
RNase_PH
Motif
Other DBs
NCBI-GeneID:
104043806
NCBI-ProteinID:
XP_009501798
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MAAPGFEPGRQPELLVQLNRIIERCLRNSKCVDTESLCVVAGEKVWQIRLDLHLLNHDGN
IIDAASIAGIVALCHFRRPDVSVQGEEVTVYTPEERDPVPLSIHHMPICVSFAFFQQGTY
LLVDPSEREERVMDGLLVIAMNKHHEICTIQSSGGIMLVKDQVLRCSKITAVKVAEITEL
IQKALENDQKGRKEGGKFGFAESIPNQKITAFKMESAAVDTNNVEEQAEEIITKAEPPSE
VFAKPILHTVGTAQIGEGIENSWGDLEESEREEAAEEEGESEATAFECQKMETEDTSTTR
ETKKDEPIVVSDSEEEEVVILEPQELPKKTRPQTNSKQETTSKKAFNKRRKKKRAAH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacctggctttgagcctggcaggcaacctgagttactggtgcaactgaacaga
ataatagaacgatgcctgagaaattccaaatgtgtagacactgaatctctctgtgttgtt
gctggtgaaaaggtttggcaaattcgtctggacctgcacctgttaaatcacgacggtaac
attattgatgccgctagcatagcaggaattgtagcgctgtgtcattttcgcaggccagat
gtatctgtgcaaggagaggaagtaactgtgtacactcctgaggaacgtgatccagtcccc
ttgagtatccaccacatgcctatttgtgtcagttttgccttcttccagcaagggacctat
ttattggtggacccaagtgaacgcgaggaacgtgtgatggatggcctccttgtaatagcc
atgaataaacaccatgaaatttgtactatccagtccagcggaggcattatgctcgtaaag
gatcaggttctgagatgcagtaaaataacagctgttaaggtcgcagaaataacagaacta
attcaaaaagccttggagaacgaccagaaaggcaggaaagaaggtgggaagttcggcttt
gcagaatctataccgaaccaaaagatcaccgccttcaaaatggaaagcgctgctgttgat
actaacaatgtggaagaacaagcagaagaaattatcactaaagctgagcctccttcagaa
gtttttgccaaacctatattgcacactgtggggacagcccaaattggggaagggatagag
aactcctggggagaccttgaagaatctgagagggaagaagcagcagaagaggaaggtgaa
agtgaggctactgcttttgaatgtcagaaaatggaaactgaagatacaagtacgacgagg
gaaactaagaaggatgaacctattgtggtgtctgacagcgaagaggaagaagttgtcatt
ctggaaccacaggagctaccaaagaaaacaagaccacagaccaactcgaaacaagaaact
acaagtaagaaagcatttaacaaaaggagaaaaaagaagagagctgctcactaa
DBGET
integrated database retrieval system