Phalacrocorax carbo (great cormorant): 104043863
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Entry
104043863 CDS
T08596
Symbol
THOC5
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104043863 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104043863 (THOC5)
03041 Spliceosome [BR:
pcao03041
]
104043863 (THOC5)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104043863 (THOC5)
Spliceosome [BR:
pcao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104043863 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
104043863
NCBI-ProteinID:
XP_009501873
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
LQEGKRGKADAEQDVRYYSEECEVDLRDPIKDYELYRETCQELQRLMAEIQELKSRGIKD
NASEIDERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMH
LQKEITKCLEFKSKHEEIELVSLEEFYKEAPAEISRPAITLSEPHQQTLARLDWELEQRK
RLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYE
TARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDVEEE
QTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDDNVLHLTFYYLMNLNVMTVKAKV
TTAVEMTTAISAGDLLSPDSLLSCLYPGDHGRRTPNPANQFQFDKVGILTLSDYVTELGH
PYVGVQRLGGLHFPKDQPQXHVAPTPLSPRHHAGVWEVLGTVVVSRLALHKQFASLEHGV
VPVSSECQHLFPTKIVSRLVKWAAIPYEDYAELPYTKDVIEAVLAEDTHLYYMALIERGT
AKLQAAVVMNPGYSTLPPIFSLCLNWKGERTSSNDDNIRAMESEVNVNYKELWGPKPGYQ
LLTNQLQRLCMVLDVYLETEPHDTSVEGPKEFPQEKMCLRLVRGPMRLKPFKFNYPQGFF
SHR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
ctgcaggagggcaagcggggcaaggccgatgctgagcaggacgttaggtactacagcgag
gagtgcgaggtggatctccgtgaccccatcaaagactatgaactctacagggagacttgc
caggagctacagagactgatggcagaaatccaggagctgaaaagcagaggcatcaaggac
aatgcttcggagattgatgagcggcggattcagagctgcgtccacttcatgacactgaag
aagctcaaccggctggctcatattcgactgaagaaagggagagatcaaacccatgaggca
aagcagaaggtcgatgcgtatcacctgcagctccagaacttgctctatgaggtgatgcac
ctgcagaaagagatcaccaaatgcctggagttcaagtcaaaacatgaggagatcgaactg
gtgagcctggaggagttttacaaagaggcccctgctgaaatcagccggcccgccatcacc
ctgtcagagccccaccagcagaccctggcccgcctggactgggaactggagcagcgcaag
aggctagcagagaagtacaaggagtgcctgaccagcaaggagaagatcctgaaggagatt
gaggtgaagaaggagtatctgagcagcctccagcctcgactcaacagcatcatgcaggcc
tccctgcccgtccaggagtatctcttcatgccttttgaccaggcgcacaaacagtatgag
acagcccggcacctcccgccacctctctacgtcctcttcgttcaagccagcgcctacggt
caggcctgcgataagaagcttgtggtggccattgaggggagcgtagaggaagccaaagcc
ctgtacaagccacctgaggactcacaggatgatgaaagcgattctgacgtggaggaggag
cagaccacgaagcggcgcaggcctaccctaggtgtgcaactggatgacaagcgcaaggag
atgctcaagcggcaccctttgtctgtcactgttgacctgaagtgcaaagacgacaatgtg
cttcacctgaccttctactacctgatgaacctcaatgtcatgacagtgaaagccaaggtg
accactgctgttgagatgacaaccgccatcagtgctggggacctgctctccccagactcc
ctcctcagctgcctctatccaggagaccatgggaggagaacgcccaacccagccaaccag
ttccagtttgataaagtgggcatcctgaccttgagcgattacgtgacagagctgggacac
ccctatgtgggggtgcagaggctgggcggcctgcatttccccaaggatcagcctcagnng
catgtcgcacccactcccctctcccccagacatcatgctggggtttgggaggttttgggg
acagttgtcgtgtcccgcctggctctacacaagcagtttgcgtcactcgagcacggagtt
gtgccagtctccagcgagtgccagcacctcttccctacaaagatcgtctcgcgcctggtg
aagtgggccgccattccctatgaagattacgcggagctgccctacactaaagatgtgata
gaggccgtcttggctgaagacactcacctctactacatggccctgatagaaagaggaaca
gccaagctgcaggccgctgtggtcatgaaccctggttactccacgctgccacccatcttc
agcctgtgcctcaattggaaaggggagcgaaccagcagcaacgacgacaacattcgggcc
atggagagcgaggtcaacgtgaactacaaggagctgtgggggcccaaaccaggctaccag
ctcctcaccaaccagctgcagcgcctgtgcatggtgctggatgtctacctggagacggag
ccccacgacaccagtgtggaggggcccaaggagtttccccaggagaagatgtgtctgcgc
cttgtcaggggacccatgcgcctgaagcccttcaagttcaactaccctcaggggttcttc
agccatcgctga
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integrated database retrieval system
