Phalacrocorax carbo (great cormorant): 104044134 Help Entry 104044134         CDS       T08596                                  Symbol IKBKAP Name (RefSeq) elongator complex protein 1   KO K11373   elongator complex protein 1 Organism pcao  Phalacrocorax carbo (great cormorant) Brite KEGG Orthology (KO) [BR:pcao00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:pcao03016]     104044134 (IKBKAP) Transfer RNA biogenesis [BR:pcao03016]  Eukaryotic type   tRNA modification factors    Elongator complex     104044134 (IKBKAP) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_ELP1_1st A-sol_ELP1 HB_ELP1 Beta-prop_ELP1_2nd TPR_ELP1 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 TPR_GEMI5 TPR_IF140-IFT172 Herpes_UL37_2 MlrA_C Motif Other DBs NCBI-GeneID:  104044134 NCBI-ProteinID:  XP_009502199 LinkDB All DBs Position Unknown AA seq 1301 aa AA seqDB search MPVSRVFRSHWPLLYVKVTREVSLTAEGFMPEDGSGCIVGIEDLPEQESVCVATAAGDIL LCNLSTKQVECVGSVDSGLSTMSWSPDQELVLLATGQQTLIMMTRDFEPITEKQIHQDEF GEGKFVALGWGKKETQFHGSEGKQAAHRKQTEVSPTSAWDDSRPRVTWRGDGQFVAVSAV CPETGARKVRVWNRELVLQSTSEPIAGLEQALSWKPSGNLIASTQEKPNRYDVVFLEKNG LLHGEFTLPFQKGQVKVNELLWNADSTILAIWLEDLKVENSNPNSYVQLWTTGNYHWYLK QSLHFGSLEQNRLVSLLWDRENPYRLHILCQGWHYLSYVWHWTTDHGMGENSQHVANVAV IDGDKVLVTAFQHAVVPPPMCTYEIQLPQPVNQVAFHTDPKHSGDMAILDADNKISVYRY GQSTVNDPTVRFGALGGNGFKAAVEIPYLDKTYRVDVSSDNNQVMNPLGLRFLTWLPDDS FLVVGQGQHAAQSVLHHLTAVPHVGGAEEERLNLRLSVPVDGEVISLCCSPVTKTVALQL AHRQILKYLWEASTPVLEPWKTSSGTALQFPYPCVQTSITRISGEEMILGLTDRCRFFVN DIEVASNITSFATYNEFLLVTTNSHTCQCFCLKNISVKALQAGLSSAAAPNSETLRKVER GSRIITVVPQDTKVVLQMPRGNLETVHHRALVLAQVRKWLDRLMFREAFQCMRKLRINLN LLYDYNPKAFVENAETFIRQIDSVNYINLFFTELKEEDFTRSMYPSLNGSSNAQPRQHPD QKKVNLICDVMRVAMEHIDPQKYCLSILTAHVKKSPPELEIALQKVHDLRESITPDAKAV SAEEALKYLLFLVDVNELYDYSLGTYDFDLVIMVAEKSQKDPKEYLPFLNTLRKMETNYQ RYTIDKHLKRYTKALGHLSKCGPEHFSEFLNLVKDQNQYCEALKLYPSSTQEYKDISDAY GEYLIQKQLYEQAALIFARAGILAKALDAFQNSGSWQQALCMASQLGYTKDKLSSLARSM AGKLVEQRKHAEAAILLEQYAQDCEEAVLLLLEGAVWEEALRLIHKYGRLDILETNFKPA ILEAQKSQLIFLDSQRTAFLRHKSRLQVVRELKEKACESLQDYEMPNCPELDLFSETSSV VTASDMNSKYSHSNSRISARSSKNRRKAERKRYSLKEGSPFEDIALLEVLGENVRAVETV KGDMHILLKQLVLFGYDEQAGALQQVLEEVLQLMETSIPEIWTPDLQQSSVNLVLGPNST ANSIMAAYQQKRMMTPVVQDPELLIPPKLNKNLQWKLHLLQ NT seq 3906 nt NT seq  +upstreamnt  +downstreamnt atgccagtgagtcgtgtatttagaagtcattggcctcttctctatgtcaaggtgacgaga gaagtttccttgactgcagagggtttcatgcccgaggatggaagtggctgcattgtgggt attgaagatcttccagagcaggagtctgtctgtgttgctacagcagctggagacatccta ctgtgcaatctcagcacgaagcaggtggaatgtgttggaagtgtagacagcggtctgagt accatgagctggagtcctgaccaagagcttgttttgcttgcaacaggtcagcaaacactc atcatgatgacaagggattttgaaccaattaccgagaagcaaatccaccaggatgagttt ggggaaggaaagtttgttgctcttggctggggtaaaaaggagacacagttccatggatca gagggaaaacaggcagcacatcgcaaacagacggaagtgtcacctacttcagcctgggat gacagcaggcctcgggtgacatggagaggagatgggcagtttgttgcagtgagtgctgtc tgtccagaaacaggtgctcggaaggtccgagtatggaacagagaacttgtgctgcagtca acaagtgagcctattgcaggattagaacaagcactgtcctggaagccctctggaaacctg attgcatccacacaagaaaaacccaacagatatgatgtggttttcttggagaagaatgga cttcttcatggggagttcaccctcccattccagaaggggcaggtcaaagttaacgaactg ctttggaatgcagattctacaatcctggctatatggctggaagacctgaaggtggaaaac tccaacccaaacagttatgttcagctgtggaccacagggaactatcactggtacctcaag caaagtctacattttggtagcttggagcaaaatcggttggtgtcgctgctgtgggaccga gagaacccatatagactgcacatactctgccagggttggcattacctctcctatgtctgg cattggaccacagaccatgggatgggggagaatagtcaacatgtggcaaatgtggctgtc atagatggagataaggtgcttgtcacagcattccagcatgctgtggtgcctccacccatg tgtacctatgagatccagctcccacagccagttaatcaggttgcgtttcacacagatccc aaacatagtggagacatggctatcttggatgctgataacaagatctctgtgtacagatat ggacagagcacagtgaacgaccccactgtcaggtttggagctttgggtggaaatggtttt aaagcagctgtggaaataccatacctggataaaacctacagagttgatgtgagcagcgac aacaaccaagtgatgaatcctctggggctccgatttctcacctggctgccagatgacagc ttcctggtggttggtcagggtcagcatgctgctcagtctgtccttcaccatctgactgca gtgcctcatgtgggtggagctgaagaagagcgcctgaatttacggttgtctgtgcctgtc gatggagaagtgatcagcctgtgctgcagcccagtgaccaaaactgtagctttgcagctg gctcatagacagatcctgaaatacctctgggaggcttctactccggtccttgagccctgg aagactagcagtggcactgctcttcagttcccctacccttgtgtgcagacttccatcacg aggatcagtggtgaagagatgatcttgggcctcacagatcgatgccggttttttgttaat gatattgaggttgcttccaacatcacctcatttgcaacatacaatgagtttttgttggtg acaacaaactcccacacctgccagtgcttctgcttgaagaacatatcagtgaaagccctt caggctggcctgagcagtgccgctgcacccaatagtgagaccctgcgcaaggtggagcga ggttcacgtatcatcaccgttgtgccccaggacacaaaggttgtgctgcagatgccaaga ggaaatctggagactgttcaccaccgagctctggttcttgcccaggttcggaagtggcta gacaggcttatgttcagggaggcatttcagtgtatgaggaagctgcgaatcaatctcaat cttctctatgactataatcccaaggcatttgtggaaaacgcagaaacctttatcaggcaa atagattctgtgaactatatcaacttgtttttcacagaactgaaagaagaagatttcaca aggagtatgtacccatctctgaatggtagcagtaatgctcaaccacgccagcatcctgat cagaaaaaagtaaacctcatatgcgatgtgatgagagttgccatggaacatattgaccca caaaaatattgcctatcgattctgacagcacatgtaaagaaaagccctccagaactggaa attgctctccagaaggttcatgatcttcgagaaagcattactccagatgccaaagcagtg agtgcagaagaagcactgaagtacttgcttttccttgtggatgtcaatgaactgtatgat tattccttggggacatatgactttgatttagtcatcatggtggcagaaaagtctcaaaag gacccaaaagaatacttgcccttcttaaatactctccggaaaatggaaaccaattatcag cgatatacaatagacaaacacttgaagagatacacaaaagctcttgggcacctcagcaaa tgtggtcctgaacacttctctgaatttctgaacttggtgaaggatcagaaccagtattgt gaagccttgaagctgtacccctccagcactcaggagtataaggatatcagcgatgcatat ggggagtacttgattcagaagcagctatatgaacaggctgcattgatatttgctcgtgct ggcatcttggcaaaagcgcttgatgcttttcagaacagtggcagctggcagcaagccctg tgtatggcatcacagcttggttacacaaaggacaagctgtccagcctggcacggagcatg gcaggaaaactagttgaacagagaaagcatgcagaggcagccatactcctggagcagtac gctcaggactgtgaagaggctgttctcctgctcttagaaggggctgtctgggaagaggct ttaagactgattcacaagtatggtagactggatatcttggagaccaacttcaaacctgct attctggaagctcagaagagtcagctgatcttcttagattctcagaggacagcgtttctt cgccataagagtcgcctgcaagtggtccgagagctgaaggagaaggcttgtgagagcctg caggattatgaaatgccaaattgcccagaattggatcttttctctgaaaccagtagtgtt gtgacagccagcgacatgaacagcaaatattcacacagcaattcaagaatatcagcccga tcctcaaagaaccggcgcaaggctgagcgcaagagatacagcttgaaggaggggagtcct tttgaagatattgcccttctggaagtcctgggagaaaatgttcgtgctgttgagactgtg aagggagacatgcacatccttctgaaacagcttgtgctgtttggttatgatgagcaagct ggggcactgcagcaagtcctggaagaggttttgcagttgatggagacctcgatcccagaa atttggactccagacctgcagcagagctctgtcaacctggtcctgggacccaattcaact gcaaacagcattatggctgcctatcagcagaagaggatgatgactcctgttgtacaagat ccagaattacttattccaccaaaactcaataaaaatctacagtggaaactgcatcttctc caataa

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