Phalacrocorax carbo (great cormorant): 104044160 Help Entry 104044160         CDS       T08596                                  Symbol TNR Name (RefSeq) tenascin-R   KO K06252   tenascin Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04510   Focal adhesion pcao04512   ECM-receptor interaction pcao04518   Integrin signaling Brite KEGG Orthology (KO) [BR:pcao00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104044160 (TNR)    04518 Integrin signaling     104044160 (TNR)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104044160 (TNR)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pcao00536]     104044160 (TNR) Glycosaminoglycan binding proteins [BR:pcao00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104044160 (TNR) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Pur_ac_phosph_N EGF_TEN Fn3_Dep-1_2nd EGF_Teneurin FN3_Tor_3rd EGF_Tenascin EGF_2 Lzipper-MIP1 DUF7949 Motif Other DBs NCBI-GeneID:  104044160 NCBI-ProteinID:  XP_009502228 LinkDB All DBs Position Unknown AA seq 1254 aa AA seqDB search MGTDSENPVLRNVLISFNLLLLGAVLKPFECRLEVPTEPAERPAVDEESGPANCSPPIKE QPMVFHHIYNINIPLDSCCSSMFKSSAEEVSSEDDRLAEYAEQTSDSESQVTFTHRINLP KQACKCSTSLPSLQELLSRIEILEREVSMLRDQCNSNCCQENAATVCVDGECVCEEGFIG EDCSQLRCPRDCSGKGHCANGTCICQEGYTGEDCGWLHCPNACSGRGVCQDGLCVCEEGY EGQDCSAVASPENLRVMEVSDSSIELAWDSPGAVTEYVISYQPAGPGGTQLQQRVPGDSS SITITELEPGVAYNISIYAVISNVLSTPVTSKVMTNLATPQGLKFKTITETTAEVQWEPF SFPFDGWEISFIPKNNEGGMIAQLPSTVTTFNQTGLKPGEEYTVTVVALKEQARSPPTSN SISTLIDGPTQILVRDVSDTVAFVEWTLRLQPPLSQYSLQALRPGARYRLAVSALRGANE SRPALAQFTTEIDAPKNLRVGSRTPASLELAWDNSEAEAHSYRVVYSTLAGEHYHEVLVP RDTGPTTRATLTDLVPGTEYGIGISAVMGSQQSVPATMNARTELDSPRDLLVTASTETSI SLTWTKATGPIDHYRVTFTPASGMASEVTVPWDKSQLTLSELEPGTEYTISIIAERGRQQ SLEATVDAFTGARPITQLHFSQLTSSSVNVTWSDPSPPADRLVLTYSPRDEEEAQQLMLD GTRRHASLMGLQPSTEYLVSLVAMHGAISSEPVVGSITTGIDAPKDLRVGNVTQESMTVY WSPPIAAFDHYRISYRAAEGRTDSTAITSDATEYALRRLQPATKYEIGVKSVRGREESEV ASITVHTAMDVPLGVTATNVTPTEALLQWNPPLSEVESYVLVLTRRAAARETILVDGVNQ EYQLTNLLPSTTYTVSMYATNGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPP VGEMENYIMIYRSSDGSRKELIVDAEDTWIRLEGLSETTEYTVSLQAAQNAMRSGFISTT FTTGGRVFANPQDCAQHLMNGDTLSGIYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQ NGLTDFFRKWADYRVGFGNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKF SISDSRSLYKLRIGDYNGTSGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCH RTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL NT seq 3765 nt NT seq  +upstreamnt  +downstreamnt atggggactgacagtgaaaacccagtcctgaggaatgtgctcatcagcttcaacctgctc ctgctgggtgccgtccttaaacctttcgagtgccggctggaggtaccaacagagccagct gagaggccggcagtggatgaggaaagtggccctgccaactgcagcccacccatcaaagag cagcccatggtcttccaccacatctacaacatcaacatccccctggacagctgctgctcg tcaatgttcaagtcttcagccgaggaggtgagttcagaagacgaccggctggcggagtat gcggagcagacctctgacagcgagagccaggtcaccttcacccacaggataaacttgccc aagcaggcctgcaagtgctccacctccctcccgtccctgcaggagctgctgagcaggatt gagatactggagagggaggtctccatgctccgggaccaatgcaactccaattgctgccaa gaaaatgcagccacagtctgcgtggacggtgaatgtgtctgtgaggagggtttcatcggg gaggattgctcccagctgcggtgcccccgcgactgctcagggaagggccactgcgccaac ggcacatgcatctgccaagagggctacaccggcgaggactgcgggtggctgcactgcccc aatgcctgcagcggtcgtggggtctgccaggacggtctctgtgtctgcgaggaaggctac gaagggcaggactgctcggcagtggcttctcccgaaaacctgcgagtgatggaagtcagc gacagctccatcgagctggcatgggacagccctggggcagtcactgagtacgtcatctca taccagccagcggggccagggggcacccagctccagcagcgggtgcctggggacagtagc agcatcaccatcacagagctggagccaggtgttgcctacaacatcagcatctacgcggtc atcagcaatgtcttgagcacccctgttacctccaaggtgatgaccaaccttgccacgcca caggggctgaagttcaagaccatcacagagacgacggcagaggtgcagtgggagcccttc tctttcccctttgacggctgggagatcagcttcattcccaagaacaatgagggcggcatg attgcccagctccccagcaccgtcaccaccttcaaccagacagggctgaagccaggtgaa gagtacaccgtcactgtggtggccctcaaggaacaagccaggagccctcccacctccaac agcatctcaaccctcatcgacggcccaacgcagatcctggtgcgggatgtctccgacaca gtggcctttgtggagtggacactccgcctgcagcctcccctcagccagtactccctgcag gccctgcggcccggcgcccgctaccgcctcgccgtcagcgccctccggggtgccaacgag agccggccggccctcgcccagttcaccacagagatagatgcccccaagaacctgcgggtg ggctcacggacgcctgccagccttgagcttgcctgggacaacagcgaggctgaggcacac agctacagggtggtctacagcaccctggccggggagcactaccatgaagtcctggtgccg cgggacactggtcccaccacccgggccaccctcacagatcttgtgccggggacagagtac ggcatcgggatttcagccgtgatgggcagccagcagagtgtgccggcaaccatgaatgcc agaactgagcttgacagcccccgggacctcctggtgacagcctccacagagacttccatc tcactgacctggaccaaagccacaggtcccattgaccactaccgtgtcaccttcacccct gcctcggggatggcctccgaagtgacggtgccctgggacaagtcgcagctcaccctctcg gagctggagccagggacagagtacaccatctccatcatcgcagaaaggggacgccagcag agcctggaggccactgtggatgcattcacaggggcccggcccatcacacagctccacttt tcccagctgacatcctccagtgtgaatgtcacgtggagtgatccatccccaccagcagac cgcctcgtcctcacctacagcccccgggatgaggaggaggcacagcagctcatgcttgac ggcacccgcaggcatgccagcctgatgggcttgcagccatccacagagtatctggtgtca ctggtggccatgcatggtgccatcagctccgagcctgttgtgggctccatcacgacaggg attgatgcaccgaaggacctcagggtgggaaatgtcacccaggagtccatgactgtctac tggagccctcccatcgctgcctttgaccactatagaatttcgtaccgtgccgctgaaggg aggacagacagcaccgccatcaccagtgatgccactgaatatgccctccgccgcctgcag cccgccaccaaatatgagatcggcgtgaagagtgtgcggggccgggaggagagtgaggtg gcttccatcactgtgcacacagccatggatgtccccttgggggtcacagccaccaacgtc acccccaccgaggcgctgctgcagtggaacccaccactgtcagaggtggagagctatgtc ctcgtcctcacacgccgtgcagctgcaagagaaacaattcttgtggatggagtcaaccag gagtaccagctgaccaacctcctgcccagtaccacctacacagtctctatgtatgccacc aatgggcctctcaccagccagaccatcagcaccaactttacaactcttttggatcctcca actaatctgactgcgagtgaagtcactcgacggagtgccttgctctcctgggtgcctcct gtgggagagatggagaactacatcatgatctacagatcttccgatggcagccggaaggag ctgattgtggatgctgaggacacgtggatccgcttggaggggctttctgagaccacagag tacaccgtgagcctgcaagctgcccaaaatgccatgcggagtggcttcatctccaccacc ttcaccacaggcggccgtgtctttgctaaccctcaggactgtgcccagcacctgatgaat ggagacacactgagcggcatctacaccatctccatcaatggggacctcagccagcgagtg caggtgtactgtgacatgaccactgacggaggcggatggattgtcttccagaggcggcag aacgggctgactgatttcttccggaaatgggcagactaccgggtgggttttggaaacttg gaggatgagttttggctgggcttggacaacatccacaagatcacttcccaggggcgctat gagttgcgaatagacatgagggacggccaggaagcagcatatgcctactatgacaagttc tccatcagcgactcccgcagcctgtataagctgcgaattggggactacaatggcacttca ggggactccctcacctatcaccagggccgccccttctccaccaaggacagggacaatgat gttgctgtgaccaactgcgccatgtcctacaaaggggcctggtggtataagaattgccac cgcaccaacctcaatggcaagtacggagagtcccggcacagtcaggggattaactggtac cattggaaaggccacgagttctccatcccctttgtggaaatgaagatgcgaccatacaac caccgtaacatctctgggaggaagagacggtccctgcagctctga

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