Phalacrocorax carbo (great cormorant): 104044333
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Entry
104044333 CDS
T08596
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104044333 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104044333 (RAD54B)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104044333 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TusA
SWI2_SNF2
AAA_34
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
104044333
NCBI-ProteinID:
XP_009502442
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MEGKDIGRGTGYKSKELDSLGEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTYDTV
PTALSQTNMKPFCKPFKNVCQTNTKENMLKDSQSYKPRHDPNASNSLVMPRPSASHQRMF
NKAGLPMVDVVVDPYIANNLRHHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQC
IALIWTLLRQGVYGCKPVIKRALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEE
FIGSPLHSVLIISYEMLLRSLDQIQAIEFHLLICDEGHRLKNSSIKTTTALTSLSCERRI
ILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATKEEKEFGEKRA
AELTRLTGLFILRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLSSQVIRSCLQGRL
ENSPHLICIGALKKLCNHPCLLFKAIKEKSCDPMSDEHDESSLYEGLIDVFPQEYTLDTF
SETESGKLQVLVKLLAAIRELNSTERVVLVSNYTQTLNILQETCKRYGYTYTRLDGHTPV
SQRQQIVDTFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWR
DGQKHTVYIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTTEHIHFSTEELRNLFTLH
EDSSCVTHDLLECDCMGKKDHQ
NT seq
2047 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaagacattggaagaggtactggatataaatctaaagagctagacagtctt
ggtgaaggccaaacactgatggttggaggaaaagaaattgaagtgatgggtgtaatttca
gcagatgacttcagcagtggcaggtgttttcaagctgggatagggacttatgacacagtc
ccaactgctttatctcaaactaatatgaaaccattctgtaaaccattcaaaaatgtctgt
cagaccaatactaaagagaacatgctcaaagattctcaaagctacaaacctcgccacgat
ccaaatgcttcaaactctctagttatgccaagaccaagtgcaagtcatcagcggatgttc
aataaggctggtttacctatggtggatgtagttgtggatccttacattgcaaataatctc
cgacatcatcagaaagaaggaattatatttctatatgaatgtgtaatgggaatgagagtt
agtggcagatttggagctattcttgctgatgaaatgggcttaggaaaaacattacaatgc
attgcacttatctggactcttctgcgtcaaggggtctatggatgcaaacctgtaataaaa
cgagcactaattgtcactcctgggagtctggtaaaaaactggaaaaaagaatttcagaaa
tggttgggaagtgaaaggatcaaagtctttacagttgatcaggaccacaaagtagaagaa
ttcatcggttctccacttcattcagttttgataatcagttacgagatgctgctgcgatct
ttggatcaaattcaggctatagaatttcaccttctaatctgtgatgaaggacatcgcctg
aaaaatagctctattaagacaactacagccctcactagtctgtcttgtgagaggagaatt
atccttactggtactccaatccaaaatgacttgcaagaattttatgcgttaatagagttt
gtgaatccaggaatacttggttctttatccacatatagaaagatatatgaggaaccaatt
gtcaggtctagagaaccttcagcaacaaaggaggaaaaggaatttggagaaaaacgagca
gcagaactcacgcgcctcacgggactctttattcttaggagaacacaggaggttataaac
aaatttctgccccccaaaaaggaaagcataatcttctgccgaccaacagcactgcaactt
gaattgtatcgaaaactgcttagttctcaagttattaggtcctgtctacaaggcaggcta
gagaacagtcctcacctaatatgtataggagctttgaaaaaactttgcaatcatccatgt
cttctgtttaaggctataaaggaaaaaagctgtgatcctatgtctgatgaacatgatgag
tccagtctgtacgaaggtctaatagatgtctttccacaagaatatactctggatactttc
tctgaaacagaatcaggaaaattgcaggtgctggtgaagttgttagcagcaatccgtgag
ctcaactctactgaaagagttgtactggtatccaattacactcagacattaaacatatta
caagagacatgcaaacgttacggatacacttatactagacttgatggacatactcctgtc
tcccaaagacaacagattgttgatacctttaatagtaaattcagtccagcttttatcttt
ttgctgagttcaaaggctggcggagtaggactgaatctggttggagcatctcatttgatc
ttgtatgatatcgactggaatccagctacagatattcaggcaatggctagagtgtggaga
gatggtcagaaacacactgtatatatctacagactgctaaccacaggctcaatagaagaa
aagatttatcaaagacagatcagcaaacaagacctttctggggcagttgtagacctttcc
aagacaactgaacacatccatttttcaactgaggagcttagaaatctctttacacttcat
gaagattccagctgtgttacccatgacttgcttgagtgcgactgtatgggaaagaaagac
catcaaa
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