KEGG   Phalacrocorax carbo (great cormorant): 104044378
Entry
104044378         CDS       T08596                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
pcao  Phalacrocorax carbo (great cormorant)
Pathway
pcao03082  ATP-dependent chromatin remodeling
pcao03083  Polycomb repressive complex
pcao04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104044378
   03083 Polycomb repressive complex
    104044378
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    104044378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcao03036]
    104044378
Chromosome and associated proteins [BR:pcao03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     104044378
  Histone modification proteins
   HAT complexes
    HATB complex
     104044378
   HDAC complexes
    Sin3A-HDAC complex
     104044378
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     104044378
    PRC2.2
     104044378
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     104044378
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104044378
  Chromatin remodeling factors
   NuRD complex
    104044378
   NuRF complex
    104044378
   NuRF complex (fruit fly)
    104044378
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 CAF1C_H4-bd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 104044378
NCBI-ProteinID: XP_009502487
LinkDB
Position
Unknown
AA seq 390 aa
MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA
SHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYT
KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK
VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE
VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS
SGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE
DNIMQVWQMAENIYNDEDPEGSVDPEGQGS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgacccacgctctggaatggcccagcttgactgctcagtggcttcctgatgtaacaaga
cctgaaggcaaagatttcagtattcaccggttagtcctggggacccatacttcagatgaa
caaaatcatcttgtgatagctagcgtgcagttgcctaatgacgatgcacagtttgatgct
tcacactatgatagtgagaaaggagagtttggaggctttgggtcagttagtggaaaaatt
gaaattgaaatcaagataaatcacgagggggaagtgaacagagcacggtacatgccacag
aacccgtgtatcatcgctacgaagactccatccagtgatgtccttgtctttgactacacc
aaacacccttctaaaccagacccttctggagagtgtaaccctgatctgcgtcttcgtgga
catcagaaggaaggttatgggctgtcatggaacccaaacctgagtgggcatttgcttagt
gcttctgatgatcataccatttgcttgtgggatattagtgctgttccaaaagaaggcaaa
gtggtggatgcaaagaccatcttcacagggcacacagcggtagtggaagatgtatcttgg
cacctgctccatgaatctctctttggatctgttgctgatgatcagaagctcatgatatgg
gatactcggtcaaacaacacttccaaacctagtcactcggtggatgctcacacagctgaa
gtcaactgcctctctttcaatccctacagcgagtttattctggctacgggatcagctgat
aagactgttgctttatgggacttgaggaacctaaaactgaagttgcactcctttgaatca
cataaagatgaaatatttcaggttcagtggtctccccataatgaaactatactggcctcc
agtggcactgaccgcaggctaaacgtttgggacttgagtaaaattggagaagagcagtcc
cctgaagatgctgaggatggtcccccagagctgttgtttattcatggtggtcatactgca
aagatatccgatttctcctggaatcccaatgaaccctgggtaatttgttctgtatcagaa
gataatatcatgcaagtctggcaaatggcggagaacatatacaatgatgaagaccccgaa
ggaagcgtggatccagaaggtcaaggatcctag

DBGET integrated database retrieval system