Phalacrocorax carbo (great cormorant): 104044430
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Entry
104044430 CDS
T08596
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104044430 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104044430 (TAF4)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104044430 (TAF4)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104044430 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
104044430 (TAF4)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104044430 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
104044430
NCBI-ProteinID:
XP_009502552
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGP
GSVGKGNTVNAVLPSASNTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGTGAPTVTLVR
PPIHTAGPTVAAAGAATQNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGST
VPAAPATQVIKSESPKTIVQTVSQQQTLATAGQPSTTGGNMIIGQTMQAGLSNVAPNPGG
IPPAAPGTPTGMAKGTANTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQN
FQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTV
QAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATA
VQTGTPQRTVQGTTATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQN
LLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKVTYLTPDSAAFIQQSQQQQPTTQATIAT
IPSAAVLLSSSVQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAG
ALIRPPQVTLTQAPMVALRQPHSRIMLATPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQ
VAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDET
FLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQKNISYKDD
ERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEM
QQQELAQMRQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFT
RQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccttgtccaccaggaatggcaagattgggaccacaacagtgcaaactttg
aatgggagtaacgtggtgatgaactctcaccatacaggaagtgctgctttctctgggact
cctgtgactgctaaccccgcttctgcacctgctgtcgcccctctcgttaacaatggacct
ggatctgtggggaaaggaaatactgttaatgctgttttgccgtcagcttccaacactgtc
atccagacttctttccttaatactgctgtgtcctctgcatcttcctcctcgcccacagtt
atctcctcacagccaccaccaagtgttggaactggggcacctacagtaacgcttgtgagg
ccaccgattcacacagcaggacccacagtagctgcagctggtgcagccactcaaaatggg
agcaatactgtgatcaattcaaccatcagtgtcgggagttttcctgctgttgctacagcc
actgtgggatctggagtttccctccagacgtcgcttgtgaacagccagtctggttctact
gtgccagcagctcctgccacacaggtcatcaaatccgagtctcctaaaactatagtccag
acagtatcccaacagcagacgctggctactgctggccagcccagtactacagggggtaac
atgattattgggcaaactatgcaagctgggctctccaatgttgctcccaatcctggtggg
atacctcctgcagctcctggcacccccacaggaatggctaaaggcactgccaatacggtg
gcacaaagtctgccaaggactccaacagcaactacgagtggaatcagagcaactttgact
cctacagttttagcacctcgtttgcctcagccgcctcagaatccaactaacattcagaac
tttcagttaccaccaggtatggtccttgtgcgtagtgagaatgggcagttgctgatgatc
cctcaacaagccttggcgcagatgcaagcacaggcacatgcccagtctcagcctcagaat
actatgactcctcgtcctgctacacctaccagtgctcctccagtacagatatcaacagtg
caggctccgggaacgcccattattgcacgacaggtgacaccaactactattatcaagcaa
gtgtctcaggctcaaacaacagtgcaacccacaacaacgctacagcgtcctcctgttgtg
caacctcagattgttctgggtggtactgcacaaactactacgttggggacagcaacagct
gtacaaactggaactcctcagagaacagtgcaaggaacaacagcaacctccactgctgcc
acagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacattaataaaactg
gcatcatctggaaaacagtcttcagagactgcggctaacgtgaaagaattggtacagaac
ctgctggatggaaaaattgaagcagaagactttaccagtaggctgtacagagaacttaat
tcttcacctcagccttaccttgtgcctttcctgaaggtaacttatttaacaccagactct
gcagctttcattcaacaaagtcaacagcaacagccgacaacgcaagcaacgatagcaacg
attccatctgcggcggtgcttctaagctcctcagttcagcgcacagcagggaaggcgact
gcaactgtaacgagtactctccaacaacctgtaatcagtctaactcagcctacacaagtt
ggtgttagtaaacaagggcagtctacaccactggttatccaacagtctcaaaaagcaggg
gcattgataaggcctccacaggtaacgttgacacaggcaccaatggtagcactgcggcaa
ccacatagtcgtattatgctcgctactcctcaaattcaactgaatcaacttcagacagta
cctgtggtaaaaccagcagtattacctggaaacaaggcaattgccactgtttcgacacaa
gtagctgctgctcagaagaacaaactgaaagaacctgggggaggctcttttagggatgac
gatgatattaatgatgttgcatcaatggctggagtcaacctgtcagaagaaagcgctcgg
atattggcaacaaactctgagctagtaggcacattaacaaggtcctgtaaagacgaaacc
ttccttttcccagcacctttacaaagaaggatattagaaataggtaaaaaacatggaata
acagaaatccatcctgatgtagttagctacgtatcacatgctacacaacaaagactacaa
aacctcgtggaaaaattatcggagactgctcaacaaaagaatatttcttacaaggatgat
gaaagatacgaacaagcaagtgatgttcgggcacagctcaagttctttgaacaacttgat
caaatagaaaagcagcgtaaagatgaacaagaaagggaaattttaatgcgtgcagcaaag
tctcgatctcgacaagaagatccagaacagcttaggttgaaacagaaggccaaggagatg
cagcaacaagagctagcacagatgagacagagggatgccaacttgactgcgttagctgct
attggacccagaaagaaaaggaaagtagattcaccgggatcgggatcagggacagaggga
tctggttcaagcgcagcagtcccaggcagctcgggagttggaacaaccagacagtttacg
cgacaaaggataacgcgggtgaacctcagggacctcatattttgtttagaaaatgagcga
gagacaagccattcactattgctatataaagcattccttaagtaa
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