Phalacrocorax carbo (great cormorant): 104044611
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Entry
104044611 CDS
T08596
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104044611 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104044611 (CPSF2)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104044611 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104044611 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Beta_lactamase3
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104044611
NCBI-ProteinID:
XP_009502755
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKVVTKVPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHL
NGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVL
ELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQ
FRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTTPGTL
ARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESD
AEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPED
FLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDYEGRS
DGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDATSETH
IYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLEMQVD
MPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPRLSDF
KQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgattatcaagttgacaacgctttcaggggtgcaggaggaatctgccctttgc
tatctgttgcaagtagatgaatttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattctctgaggaaacatgtacaccaggttgatgctgttcttctt
tctcatcctgaccctctacaccttggtgctcttccatatgcagttggaaaaatggggttg
aattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctgtaccagtcccgccataatactgaagatttcacgctctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaatttgaaaggtaaa
gttgtcaccaaagttccngctggccacatgataggaggcacgatttggaagattgtcaag
gatggagaggaagaaattgtttatgcagttgatttcaaccacaagagggagatccatctg
aatggatgttccttggaaatgttgagcaggccttcattgcttattacagattcatttaat
gctacttatgtacaacccaggaggaagcaaagggatgaacagctactgacaaacgttttg
gaaacattacgaggtgatggaaacgtattaatagctgtggatacagcaggcagagttctg
gaacttgctcaacttcttgatcagatctggagaacaaaagatgcaggattaggagtctac
tctctagcacttttgaataacgtcagctacaatgtagtggagttctctaaatcacaggtt
gaatggatgagtgacaagttgatgaggtgctttgaagataaaagaaacaatccttttcag
ttccgccatctgtccttatgtcatagtctgtctgatctggctcgagtgcctagtccgaaa
gttgttcttgccagtcagcctgacttagagtgtgggttttctagagatcttttcattcaa
tggtgccaggattccaaaaactctataattttaacttatcgcactacacctggaacatta
gcacgattcctgattgataatccttctgaaaaagttatagatatcgagttgagaaagcgt
gtcaagttggaaggaaaagaacttgaagaatacttagaaaaggagaaactaaagaaagaa
gcagctaagaagttagaacagtctaaggaggcagatattgattccagtgatgagagtgat
gctgaagaggatattgatcaaccaactgtacataagaccaaacatgatttgatgatgaaa
ggtgaaggcagccggaaaggaagcttcttcaaacaggcaaagaaatcttatccaatgttt
ccagcccctgaagaaagaattaaatgggatgaatatggcgagattatcaaacctgaggat
tttctagttccagaacttcaagcaacagaagaagaaaaaagcaaattagaatctggtttg
acaaatggagaagagcctatggaccaggatttatcagatgttcctaccaaatgtatttct
gcaacagaatccatggaaatcaaagccagagttacatacattgactatgaaggacgctca
gatggggactcaattaaaaaaattattaaccaaatgaaaccaagacaattgatcattgtc
catggaccacctgaggccagtcaggaccttgcagaatgttgcagagcttttggtggcaaa
gacatcaaagtttatatgcctaaactgcatgaaactgtagatgcaaccagtgaaactcac
atttaccaggtcagattaaaagattctcttgtcagctctcttcagttctgtaaagccaag
gatgctgagttggcttggatagatggtgttctggacatgcgggtttcgaaagtggatact
ggagttattttggaagagggagagctgagggaggatgaagacttagagatgcaagtggat
atgccttcttcagactctagcgtcattgcacaacagaaggccatgaaaagcctctttggt
gatgatgacaaggagatgtgtgaagagagcgagatcattcctactttggaacctctgcca
cctcatgaggttcttggacatcagtctgtgtttatgaatgagccaagactgtctgacttc
aagcaagttctcttgcgagaaggtatacaagccgaatttgtaggaggagtgcttgtgtgc
aacaatctggtggctgttcgcaggactgaaacagggcgcattggattggaaggctgtctc
tgtcaggacttctataggataagagaccttttatacgagcaatacgctattgtctga
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