Phalacrocorax carbo (great cormorant): 104044722
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Entry
104044722 CDS
T08596
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104044722 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104044722 (TPR)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104044722 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Tropomyosin
DUF4763
ERM_helical
Imm70
Motif
Other DBs
NCBI-GeneID:
104044722
NCBI-ProteinID:
XP_009502890
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
QQYFEVEKRLAQSQERLVNETQECQTLREELKKLNEQLKSLNEKNKELEAAQDRNAAIQS
HLSREKEELEAEKRDLVRTSERRSQEVEHLNEDVKRLNEKLTEANTEKVKLQLKLDELQT
SDVSMKYREKRLEQEKELLQNQNTWLNAELKAKTDELLHTAREKGNEILELKCNLENKKE
EVSRMEEQVNSLKQSNENLQKHVEDLLNKLKEAKEQQASMEERFHNELNAHIKLSNLYKS
AADDSEAKSNELTGAVEELHKLLKEAGEANKATQEHLAEVEESKAVIEKELREKISKLEK
ELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLL
EKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIQRLQED
ADKANKHASLLERENQRLEVQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSE
VISQHLVSYRNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQGQLEEALNELE
KLRESRHHQLQLVESIVRQRDMFRILLAQTTGAIIPLQASGILPEEVSLTSTPKRPSLPQ
AMSTPAPVSMTESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRS
QNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRG
ANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGILEKS
ETETKQRLNNQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETSRHIN
TKELLKNAQKEAAVLKQQLNNTEAQLASQSSQRAPGKGQPNTNEDVDDLLSRLRQADEQV
NDLRERLKTSSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQLEKKL
MESEKEKQDVQEDKRKAVESMEQQLSELKKSLSTVQSEVQEALQRAGTALNNEQQARRDC
QEQAKMASEAQNKYERELMLHAADVEALQAIKDQVAKNTVVRQQLEEAAQKAESELLECK
ASWEERERMIKDEASKLATRCEDLEKQNRLLHEQLESLSNKMVTSMKEAMPASVNVSLNE
EGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREK
VQVTAKTIAQHEELMKKTETMNVLIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQ
ESNAELSEKSGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANTKRI
QQMSEETGRLKAEIARTSASFTTSQNLAQSLKDEVTKIKAEKDTLQKELDAKVADIQEKV
KTITQVKKIGRRYKTQYEELKAQHDKMVATASTQSFAEQQEEQVSVQEVQDLKDTLSQAE
VKTKALEAQVESLQKTIAEKETEVRNLQEQITQLQSELARFHQDLQEKTTQEEQLRQQIT
EKEEKTRKTLLAAKQKIAQLA
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
aacaacagtactttgaagtagaaaagcgtctggctcaaagtcaggagagacttgtaaatg
agacacaagaatgtcaaactctccgtgaggagcttaagaaacttaatgaacaattgaagt
cactgaatgagaaaaataaagaacttgaagctgctcaagatcgtaatgcagccattcaga
gccatttaagtagagaaaaagaagaactggaagctgaaaagagagatttggttcgaacaa
gtgaaagacgatctcaggaagttgaacatttaaatgaggatgttaaacgcttaaatgaaa
agcttacagaagcaaacacagaaaaggtaaaacttcagttaaagctggatgaacttcaaa
catcagatgtttccatgaagtaccgtgagaaaaggttggagcaagaaaaagaactactac
agaatcaaaacacgtggctgaacgctgaattgaaagccaaaacagatgaactgctacaca
ctgccagggagaaaggcaatgaaatcttggagcttaaatgtaatctggagaacaagaagg
aggaggtttccagaatggaggaacaggtaaacagcttaaaacagtcaaatgaaaatcttc
agaagcatgtggaagaccttttgaataaactgaaggaggcaaaagaacagcaagctagta
tggaggaaagattccacaatgaactgaatgcccacataaaattatccaatttgtacaaga
gtgctgctgatgactcagaggcaaagagcaatgaactgacaggagcagtagaagagctac
acaagctcctgaaggaagcaggtgaagctaataaagcaacccaggagcatttggctgagg
tagaagagtcaaaagctgtaatagagaaagaactgagagagaagatcagtaaactggaaa
aggagctggagaatgctaatgatttgctgtccgctacaaagcgtaaaggagccatattgt
ctgaggaggaactggcagcaatgtctcccactgctgcagcagtagctaaagtagtcaagc
ctggaatgaaattaactgagctgtataatgcatatgtagaaactcaggaccaattgcttt
tggaaaagctggagaacaagagaatcaataaatatttggatgaaatagtgcaggaagtag
aagcaaaagcaccaatcttgaaacgtcagcgtgaagaatttgagcgttcccaaaaagctg
ttgctagtctgtctgcaaagcttgaacaagctatgaaggaaatccagcgattgcaggagg
atgctgataaagccaataagcatgcctctctgcttgaaagagaaaaccagagactggaag
tacaagtaaaagacctttcacagcagattcgtgtgcttttaatggaacttgaagaagcta
gaggcaatcatgtgattcgtgatgaagaagtgagctctgctgacatcagtagctcttctg
aagtgatatctcaacatctagtctcttacagaaatattgaagaacttcagcaacagaatc
aacgtctcttggtggctcttcgggagctgggagaggctagagaaaaagaggagcaagaaa
caacgtcatcaaaaatttctgagcttcagggtcagcttgaagaagctctcaatgagctag
aaaaactgcgtgaatcacgtcatcatcagttgcagcttgttgagtctatagttcgtcagc
gtgatatgttccgcatactgttggcacagactacaggagctatcattcctttgcaagcct
caggtatattaccagaggaggtttctcttacatctactccaaagcgcccaagtttacctc
aagccatgtcaactcctgctccagtgtcaatgactgagtcggtggagacggtagaggcta
aggctgcacttaagcagttgcaggaagtttttgagaactataaaaaagaaaaggcagaga
atgacaagttgctgaatgaacaaaatgagaagcttcaggagcaggtcacagacttgaggt
cacaaaatgcaaagatatccacgcagctggagtttgcctccaaacgttatgaaatgctgc
aggataacgttgaaggctatcgtcgagaaataacgtctctgcatgaaagaacccagaaac
tcacagcaacaactcagaagcaagagcagataattaacactatgactcaagacctcaggg
gagctaatgaaaaactggcagtggcagaggtgagagcagaaaacttaaaaaaagagaaag
atatcttgaagatgtcagatgtgcgtttgactcagcagcgtgagtctttattagttgaac
aaagaggacagaacttgctgcttactaatttgcgaactattcagggaatactggagaagt
cagagacagaaacgaaacaaagactcaataatcagatagaaaagctagagcgtgagatat
ctcagctgaagaagaagctagaaagtgaggtggaacaaagacattcccttaccaaaaatc
aagaggttcatatcctggatcttaagaggcaactcgaaactgagacaagccgtcacatta
acacaaaggaacttttaaagaatgcccagaaagaagctgcggtgttgaaacagcagctta
acaatacagaggctcagctagcatctcagtcatcacagagggctccagggaaaggtcagc
ctaatacaaatgaagatgtggatgatcttctaagtcgactaagacaagctgatgaacaag
ttaatgacctgagagagagactcaagactagttctagtaatgtggaacagtacagggcaa
tggttcttagtctagaggaatcccttaataaggaaaaacaagtgacagaggaggttcgtg
caacggttgaagctcgtctgaaggaatcttctgagtatcaagcacagctggaaaagaagc
tgatggagtcagagaaagaaaagcaagacgtgcaagaggataagcgtaaagctgtggaga
gtatggaacaacagctatcagaactaaagaagagtctgtcaactgtgcaatcagaagttc
aggaagctcttcagagagccggcacagctctaaataatgaacagcaagccagacgtgact
gccaggagcaagcaaagatggcttctgaagctcaaaataaatatgaacgggaattaatgc
ttcatgctgctgatgttgaagcattacaggctattaaagatcaagttgccaagaacacag
tggtaaggcagcagctagaggaagctgctcagaaagctgagtctgaattgttagagtgca
aagcctcctgggaagagagagagagaatgatcaaggatgaagcttcaaaacttgcaacac
gctgtgaagatttggaaaaacaaaatcgattattacatgaacagctggaaagtctgagta
ataagatggtaacctctatgaaagaagccatgccagcttcagtgaatgtttctctcaatg
aggaaggcaaatcccaggaacaaatcttagaaattcttagatttatacgtagagaaaagg
agattgcagaaactagatttgaggtggcccaggtggagagtttgcgttaccgtcagaggg
tggagcacctggaaagggaactccaggaactgcaggacagtcttaatgctgagagagaga
aggtgcaggtaacagcaaaaaccattgcacagcatgaagaattaatgaaaaaaactgaga
ccatgaacgtactgatagaaaccaacaagatgctaagagaagagaaggagaggctagaac
aagagctacaacaaattcaagcaaaggtacgcaagcttgaggcagacattctacctctac
aagagtctaatgctgaactgagtgagaaaagtggaatgttgcaggcagagaaaaagctgt
tggaagaagatgttaaacgctggaaagcccggacccagcatttattgagtcaacagaagg
acactgatctcgaagagtatcggaagctgctttcagagaaggaggcaaacaccaagcgta
tacaacaaatgagtgaagaaacaggcagacttaaagcagaaatagccagaactagtgcct
ccttcactacaagccagaatcttgctcagagcctgaaggatgaagtaactaaaataaaag
cagaaaaggacactttgcagaaagaactagatgctaaagtggctgacatacaagaaaagg
tgaaaactataacacaggtcaagaaaattgggcgcaggtacaagactcaatatgaggagc
tgaaagcacaacatgataagatggttgccacagcatcaactcagtcctttgcagaacaac
aggaagaacaagtttctgtccaggaagtacaagatctgaaagatactctcagtcaagctg
aagtgaagacaaaggctttggaggctcaggttgaaagtttacaaaagactatagcagaaa
aggaaactgaagttagaaatcttcaggagcagataacacagctacaatcagaacttgctc
gttttcatcaagatcttcaagagaagactacgcaggaagaacagctcaggcaacagatca
ctgagaaagaagaaaaaactaggaagaccttgcttgcagccaagcagaaaattgcacagt
tagctg
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integrated database retrieval system