Phalacrocorax carbo (great cormorant): 104044769
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Entry
104044769 CDS
T08596
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104044769 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcao04812
]
104044769 (SPAST)
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
104044769 (SPAST)
Membrane trafficking [BR:
pcao04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104044769 (SPAST)
Cytoskeleton proteins [BR:
pcao04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104044769 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
AAA_14
Mg_chelatase
AAA_16
IstB_IS21
AbLIM_anchor
DUF815
AAA_24
NPHP3_N
nSTAND3
AAA_2
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
104044769
NCBI-ProteinID:
XP_009502939
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
QKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMTNLAMAKDRLQLLEKLQA
VLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGL
SGHHRTPSYSGISTSVSRPAPNPAAKAAPKNSRTNKPSTPTTAPRKKKDLKIFRNVDSNL
ANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPP
GNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD
SLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRV
YVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIREL
KPEQVKNMSASEMRNIRLSDFTESLKKIKRSLSPQTLEAYIRWNKDFGDTTV
NT seq
1421 nt
NT seq
+upstream
nt +downstream
nt
gacaaaaggaacaagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaa
tagctgtcttagtaattggtcaaggtgatcagtgtgaacgggctcgacgtctgcaatcta
aaatgatgacaaatttggcaatggccaaggatcgcttgcagcttttagagaagctgcagg
cagttttgcaaatttccaagccgcaaatggaggtctataatgacagtactaacctggcat
gccgcaatggacatctccagtcagaaagtggagcggttccaaaaaagaaggatcccttaa
cacacacgagtaattcccttcctcgttcaaaaactgttgcaaaaactggatccacaggcc
tttcaggtcaccatagaacacctagctacagtgggatatcaacttctgtgtctagaccag
caccaaatcctgcagctaaggctgctcctaaaaatagtagaacaaataagccttctactc
ctaccactgctcctcgaaaaaagaaagacttgaagatatttagaaatgtggacagtaatc
ttgctaatcttatactgaatgaaattgttgatagtgggccagccgtcaaatttgatgata
ttgcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttctctta
gacctgagttatttacaggacttagagctcctgcacgtggtctgttgctgtttggccctc
caggaaatgggaagacaatgttggccaaagcagttgctgcagaatcaaatgctactttct
ttaatataagtgcagcgagcctaacttcaaaatacgtgggtgaaggggagaaactggtgc
gtgctctatttgctgtagccagagaacttcagccttctataatttttattgatgaagttg
atagtcttttgtgtgaaagacgagaaggtgaacatgatgctagtaggcgtctgaaaacag
aatttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatgg
gagcaacaaacaggccacaggagcttgatgatgctgttctcagacgattcaccaaacggg
tatatgtatctttaccaaatgaggaaacaagattgatattgctaaaaaatcttctaagca
agcaaggaagtccattgacccaaaaagagttggcacaactagctagaatgacagatggat
actcggggagtgatttaaccgcattagcaaaggatgcagcgctgggtcctattcgagaat
taaagccagaacaggtgaagaacatgtctgccagcgagatgagaaatatcagactatcag
atttcactgagtctttgaagaagataaagcgcagcttgagccctcagaccctggaagcat
atattcgctggaacaaggactttggagataccacagtgtga
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