Phalacrocorax carbo (great cormorant): 104044810
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Entry
104044810 CDS
T08596
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104044810 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcao02000
]
104044810 (SLC6A4)
Transporters [BR:
pcao02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104044810 (SLC6A4)
BRITE hierarchy
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Paralog
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Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104044810
NCBI-ProteinID:
XP_009502989
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All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATSNETEPLTSKKDASDCNEGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGYSGVQSSVPCSATGEMEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICVIDLYVASYYNTIMAWAFYYLVSSFTTQLPWTSC
TNAWNTGNCTDYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLTIICFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGVTQFSNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNP
PELRLFDYSYPYWTTVVGYCIGTSSIICIPIYMVYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaacgagactgagccgctgacttccaagaaagatgcctca
gactgtaacgaaggggaagactgtaaagagaacggacttctggtcaggaaccctaagtct
gccctacggctagtggaggatggcaataaagtccatcccagccagggagataaaggggag
gcagctcagatctcaaacggttattcaggggttcagagctctgttccctgcagtgcaacg
ggggagatggaagatgcccagtgcactgccccagcagccacaaccaccactacaaccacc
acttctaccacctgcggagcagagggccagcagcagctgatggagctagaagacagagag
acctggagtaaaaaaattgactttctcctctctgtcattggatacgcagtggatctggga
aatgtgtggagatttccttacatatgctatcaaaacggaggaggagcattcctcattcct
tacacaattatggccatctttggagggattcctctcttctatatggaactagcactagga
cagtaccacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtgtaatagatctttacgtagcctcctactacaacaccattatg
gcttgggccttttactacctcgtatcctccttcacgacgcagctgccgtggactagctgc
acaaacgcctggaacacaggcaactgcactgactacttcagcaaggacaatgtcagctgg
tctctgcactccatctctcccgcggaggaattttatacccgccaagttctacaggtgcac
aggtccaacgggctggatgacctggggggcattagctggcaactgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtatgggtgactgccacattcccttacatcatcctctttatcctgctagtgagaggtgcg
accttgcctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagatttttttctcccttggtccaggt
tttggggtcctattggcttatgccagctacaacaaattccataacaactgctaccaagat
gctctggttaccagtaccgtgaactgcgtgactagctttgtgtccggatttgtcattttc
actgtgctgggatacatggctgagatgaggaatgaagatgtgtcagaggttgccaaagat
accggacccagcctcctcttcattacgtatgctgaggccattgcaaacatgccggcttcc
actttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgattaccggagtcctggatgaattcccacacgtctggagcaaa
cgcagggaattgtttgtccttggtctcaccatcatttgctttctggggtcattagcaacc
ctgacgtttggaggcgcgtatgtggtaaagctgtttgaagaatatgccacgggtccggcc
gtcctaacagtcgtgtttctggaagcagttgctgtggcctggttctatggcgtcacccag
ttttccaacgatgtgaaggagatgctgggctttaccccaggctggtactggcgagtttgc
tgggtagcaattagccccatcttccttctgttcgtcacttgcagttttctgtccaatcct
cctgagctacggctttttgattacagttacccctactggaccacagtagtgggttattgc
ataggaacctcttctatcatctgtattccaatctacatggtttatcggttgatcatcact
ccaggaacacttaaggagcgtattctgaaaagcattactccagaaacggctacagaaatt
ccttttggagacatccgcatgaacgcagtataa
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