Phalacrocorax carbo (great cormorant): 104045051
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Entry
104045051 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va-like
KO
K10357
myosin V
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104045051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104045051
04131 Membrane trafficking [BR:
pcao04131
]
104045051
03029 Mitochondrial biogenesis [BR:
pcao03029
]
104045051
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcao04812
]
104045051
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104045051
mRNA cycle factors
P-body specific factors
104045051
Membrane trafficking [BR:
pcao04131
]
Others
Actin-binding proteins
Myosins
104045051
Mitochondrial biogenesis [BR:
pcao03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104045051
Cytoskeleton proteins [BR:
pcao04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104045051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
nSTAND3
AAA_22
Zeta_toxin
CENPH
Motif
Other DBs
NCBI-GeneID:
104045051
NCBI-ProteinID:
XP_009503273
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MDCPAVVMLSMGLTALGARVWIPDSVEVWRVAEITRGYKEGDTILHLCLEDGSALAYPIE
FQLPPLCNPDCLSGANDLVALSYLHEPAVLHSLRRRFLEANVIYTYCGVILVAINPYKSL
PIYEEEVIYAYSGREIGDMDPHIFALAEEAYKQMVRFGKKQSLIISGESGAGKTASAKYA
MRYFTTIGGCLGDSRMEEKVLASSPIMEAFGNAKTTRNDNSSRFGKYIEIGFSQAHVTGA
TIKTYLLEKSRVTFQAKSERNYHIFYQLCASATLHELQGLGLRGAESFHYTSQGQCSATQ
SNNDAADLDSTRHAFSLLGVPEANQLELFSILAAILHLGNIVIRGRDRRGDGCFVEPADE
ALGLFCTLLGVEASQVTHWLCHRKLVTAGETYLKPLSRQQALESRDALAKYMYGQVFRWM
VSRVNRXLRSRDGHRSSIGILDICGFEMLELNSFEQFCINYANEKLQQLFNQVVFLLQEK
XXXXXXXPWVFIDFCDNQPCIELIEGRLGILDLLNEECKMPQGSDGSWAQKLYQTHLDCS
HFQKPKRSMDAFVVCHFAGKVEYQCDGFVEKNRDAVPEELVGLLRTSKKSALLAEVFLEE
GDGPMSLQSRRSSAARIAGRPSRRSLPSSQKSKKSISSQFKASLNKLMEVLSSTTAHYIR
CIKPNDGKQPFVFNSRRAVEQLRACGVLETIRISASGYPSRWTYKEFLERYRALVSREEL
MGTDEKQICSLVLERLLQDPSKYWCGKSKVGGGMGLGGSCNALRQSSASAVVLPLGWALT
WVTLWYRLGWVXTTPCLVLCPPCRLARMLRRTRAAVVLQKTLRMVLARRSYLCMRQAAIT
IQAFARGMFARRLYQQMVWHQKAVVIQAAVRGWLAQEKQQLTEQLSGLNTAHAEEVQRLQ
AEKPRREAHVQQLQERLAELERQSMKSCLGQEVEELKQVCPRDAPVEAMKLQLGEEKDAV
IQCMLEQSQHLEEQHQRVARESQGLLQELEKERARYQNLVQEYTRLEQGYENLRDEVAFH
RQSTLRRSHSSESLLGSESSYSSSMPTALSQDGSDQQAEGLEEHLLLMPEWPQPSGEELL
NGSVGRDHFKKAYLLVLRQLNAVKEELARTREELQRLKASMEPEEGKPLDFLRHRNVPEM
LGLGRGGEGGSGDDLKHKYDAVQGANRLLESQLREEVEGLPLNISSLKQLSQQQAGLLQD
LQWRQGQEGRQHRVLWLKEENWKLAQKLEQQERTTQMLQKQLRAYAKQIQELTGKYLHGR
GGMGLAGGLPAWFEAGSPIVPSLAGLSQAMLAWRKEDEGRIIKAIITDYKPQSSPGALPD
LPAYILFLCFRHADQCCDELRAHSLLDAAISAIKRVMKKHSDDFDMVVLWLANTCRLLNC
LRQYSQDESYWQGNTARQNEHRLQNVDPQSSCCSLDALAVQLYQHLIRTAEKCLKPMIVA
AMLESEPIQGLSSSCPPGHHRSVSAPAHTLPELLQQLGSFRAALDHHGLAPSVGHQAVRQ
LLFLISGTTLNYLLLRKDTCSWSRGIQLRYTISQLEQWRRAEGLQQIGAHEVLEPLVQAA
QLLQVKKVTEEDAGALCSLCTVLSPQQVVKILRAYTPAVGLEERISPSFISSVEKRLQDQ
YGGGPSQLLVDTSHLFPVHLPFIASPLHLDELCIPDALNLAFLVHP
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggattgccctgctgttgtgatgctgagcatggggctgactgccctcggtgcccgggtg
tggatccctgacagtgtcgaagtctggagggtggcagaaataaccagaggctacaaggaa
ggagataccattcttcatctctgcctggaagatggctcggcactggcttaccccatcgag
tttcagttgccgcctctctgcaaccctgactgcctctcaggtgccaatgacctggtggcc
ctgagttacctgcatgagccagcagtgctgcactcgctccgccggcgcttcctggaggcc
aatgtcatctacacctactgcggtgtgatccttgttgctatcaacccctacaagtcattg
cccatctatgaggaagaggtaatttatgcctacagcggccgtgaaataggtgacatggat
ccccacatctttgctttggcggaggaggcgtacaagcagatggtgaggtttgggaagaaa
cagtccctcatcatcagcggtgagtcaggtgcagggaagactgcatcagccaagtatgcc
atgagatacttcaccaccattgggggctgcctgggagactctagaatggaggagaaggtg
ctggcctccagccccatcatggaggcctttgggaacgcaaagacaaccaggaatgacaac
agtagccgctttgggaagtacattgagattggcttcagccaagcgcatgtcacaggagcc
accatcaaaacctacctactggagaagtcccgtgtcaccttccaggcgaaatcagagaga
aactaccacatcttctaccagctctgtgcttcagccaccctgcatgaactccagggcctg
ggtctccgtggggccgagtcattccactacacctcccaaggccagtgctctgctacccag
agcaacaatgatgcagccgacctggacagcacgcggcatgccttctcgctcctgggtgtc
cctgaggccaaccagctggagctattcagcatcctggctgccatccttcacctgggcaac
attgtgatcagagggagggaccgccgtggggatggctgcttcgtggagcctgctgatgag
gccctagggctgttctgcacattgctaggtgtcgaggcatcacaggtgacacactggctc
tgccaccgcaagctggtcactgctggtgagacctacctgaagcccctctccaggcagcag
gcacttgaatcccgggatgccctggccaagtatatgtatgggcaggtcttcagatggatg
gtgagcagggtcaaccgnnnnctgcggtcacgggatggtcaccgttcctccattggcatt
ctggacatctgtgggtttgagatgcttgagctcaacagctttgagcagttctgcatcaac
tatgccaatgagaagctgcagcagctcttcaaccaggtggtgttcctgctccaggaaaag
nnnnnnnnnnnnnnnnnnnncccttgggtcttcattgacttctgtgacaaccagccgtgc
attgagctcatcgagggccggcttggcatcctggacctactgaatgaggagtgcaagatg
ccccaaggcagtgatgggagctgggcccagaagctttaccagacccatctcgactgctcc
cacttccagaagcccaagagatccatggatgcttttgttgtctgccactttgctggcaag
gtggaataccagtgtgatgggtttgtggagaagaacagggatgctgtccctgaggagctg
gtggggctgctgcggaccagcaagaagtctgccctgctcgctgaggtcttcctggaggaa
ggggatggccccatgtccctgcagtcccgcaggtccagtgctgctaggatagctggtcgc
cccagccgcagatctctacccagtagccaaaagagcaagaagtctatctccagccagttc
aaagcctccctgaacaagctgatggaggtgttgagcagcaccacagcacactacatccgc
tgcatcaaacccaacgatggcaagcagccctttgtgtttaactccaggagagcagtggag
cagctacgagcctgtggggtcctggagaccatccggatcagtgcctcaggctacccctcc
aggtggacctacaaggaattcttagagaggtacagggctctggtgagcagagaggagctg
atgggtactgatgagaagcagatctgcagccttgtccttgagagactgctccaagacccc
agcaagtactggtgtgggaagagcaaggttggtgggggtatggggcttggaggaagctgc
aatgctctgagacagagctcagcctcggcagttgtactgcctctgggctgggctttgacc
tgggtgaccctgtggtataggctgggctgggttnntaccaccccttgcctggtgctctgc
cctccctgcaggcttgccaggatgctgcgaaggaccagggctgctgtggtgctgcagaag
accctgaggatggttctggcccggcgctcctacctatgcatgcgccaggctgccatcacc
atccaagcctttgcccggggcatgtttgcccggcgtctttaccaacagatggtgtggcac
cagaaagccgtggtgatccaggctgctgtcaggggctggctggcccaggagaagcagcag
ctcacggagcagctctcagggctgaacactgcccatgctgaagaggtgcagcgcctgcag
gccgagaagccgaggcgtgaggcgcatgtccagcagctgcaggagcggctggctgagctg
gagaggcagagcatgaagagctgcctgggccaggaggtcgaggagctcaaacaggtctgt
ccaagggatgctcctgtggaagccatgaagctgcagctgggggaggagaaggatgccgtg
atccagtgcatgttggagcagtcacagcatctggaagagcagcaccagcgtgtggcgcgg
gagagccagggactgctgcaggagctggagaaggagcgggcacgctatcagaacctggtg
caggagtatacccgcttggagcagggctatgagaacttgcgcgatgaggtggccttccac
aggcaaagcaccttgagacggtcccattcgtcagagagcttactgggctctgagagcagc
tactcgtcctccatgcccacagctctttcacaagatggctctgaccagcaagctgagggg
ctggaggagcacttgttgctgatgccagagtggccacagcccagtggtgaggaactgctg
aatggtagcgtgggccgggatcactttaagaaggcgtaccttctcgttttgaggcagctc
aatgctgtcaaagaggagctggcccggacccgggaggagctgcagaggttaaaggcctct
atggagccggaggaggggaaaccattggactttctcaggcacaggaacgtacctgagatg
ttggggctgggcaggggcggagaaggtggcagtggagatgacttgaaacataaatatgat
gcagtgcagggtgccaacaggctgctggaaagtcagctgcgggaggaggttgaagggctg
cctctcaacatcagctcactcaagcagctgagccagcagcaggcaggcctgctccaggac
ctgcagtggcgccaggggcaggaagggcggcaacaccgtgtcctgtggctcaaggaagag
aactggaaactggcccagaagctggagcagcaggagaggaccacgcagatgctccagaag
cagctgagagcctatgcaaagcagatccaggagctcacaggcaagtacctgcatgggagg
ggaggcatgggactggctggagggttaccagcttggtttgaggctggatcccccattgtc
ccatccctggctgggctgtcccaggctatgctagcatggaggaaggaggatgaagggcgc
attatcaaggccatcatcacagactacaaaccacagagcagccctggggccctcccagac
ctgccagcctacattcttttcctgtgcttccggcatgctgaccaatgctgtgatgagctg
cgggctcactcgctcctggatgcagccatcagtgccatcaaaagggtcatgaagaagcac
agtgatgactttgacatggtggtgctctggcttgccaacacctgccggctcctgaactgc
ctgcgccagtacagccaggatgagagctactggcaggggaacacggcgcggcagaacgag
catcgcctgcagaatgtggaccctcagagctcctgctgcagcctggatgccctggctgtc
cagctctaccagcacctcatccgcactgctgagaagtgcctcaaacccatgattgttgct
gcaatgctggagagtgagcccatacagggcttgtcctcttcctgccctcctggccaccac
cggtccgtgtcagcccctgcacacaccctgcctgagctgctgcagcagctgggctccttc
cgtgcagcgctggaccaccatgggctggctcccagtgtggggcaccaggctgtgcgccag
ctcctcttccttatcagcggaaccaccctcaactacctgctgctgagaaaggacacgtgc
tcctggagccgtggcatccagctcaggtacaccatcagccaactggagcagtggcggcgg
gcagaggggctgcagcagattggggcccatgaggtgctggagcccctggtccaggctgcc
cagctgctgcaggtgaagaaggtgacagaggaggatgctggagctctttgcagcctgtgc
acggtgctgtcaccccagcaggttgtgaagatcctccgggcttacaccccagctgttggg
ctagaggagcgcatcagccccagcttcatcagcagtgttgagaagcgcctgcaggaccag
tatggagggggccctagccagctcctggtggacaccagccacctctttcctgtgcacttg
cccttcatcgcttcccccctgcacctggatgagctctgcatccctgatgccctcaacctg
gccttccttgtccacccctga
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integrated database retrieval system
