Phalacrocorax carbo (great cormorant): 104045119
Help
Entry
104045119 CDS
T08596
Symbol
POLE
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03030
DNA replication
pcao03410
Base excision repair
pcao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104045119 (POLE)
03410 Base excision repair
104045119 (POLE)
03420 Nucleotide excision repair
104045119 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcao03032
]
104045119 (POLE)
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104045119 (POLE)
Enzymes [BR:
pcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104045119 (POLE)
DNA replication proteins [BR:
pcao03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104045119 (POLE)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104045119 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
104045119
NCBI-ProteinID:
XP_009503345
LinkDB
All DBs
Position
Unknown
AA seq
2188 aa
AA seq
DB search
FIQEDGSRFKVALPYKPYFYVATQKGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHL
VGLKRNYIKLSFNTVDDLVKVRKEISPAVRKNRERDQASDVYTAMLSSALSGGSLSMDDE
EASRKVANQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTYPPEITRRDDLVE
RPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPK
PEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQ
EIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMC
RMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALL
MVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPA
AFDFLMQHVEKTLRHAIEEEEHLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHL
DVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHR
IQQQLESEKFPPLSPEGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTT
ICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQ
LAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIW
CVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLTYVTRS
ENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIF
QSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLED
YGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSV
RKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPD
WLHKKLLEKNDVYKQKXLLSLFPQVLANQPPEGTPSSQISDIEDFGAAKTLQPPVPITNK
RKRVPAAQESQQMSQYLELSQSWREILGPPPPLGTTKEERLVWLRFHQKKWELQARQRQE
RRXXXXXXXGXTAGGGVVRDALSKGLSSYLRRTARSILDLPWQIVQIAETSQPGLFRLWA
VIGNDLHCIKLSIPRVFYVNQRVPKPEEGAAYRKVNRILPRSNLVYNLYEYSVPEDMYQE
HINEINADLSAPDIEGVYETQVPLLLRALIHLGCVCMVSRQLVRHLTGREAETFDIEHLE
MRSLAQFNYLEPGSIRHIYLYHSSQGSKALLGLFIPSQCKAAVFVLDKVRSNQMPNLTTL
FSVERSALLEKVGEELLPPDKHTFEVRAETDPKAIYRAVQRLLLGYKVRXRFKEGPXXXX
XXXXWDLKRLASVIPIIEEFPLVPIRLVDDISYAVLDWQRHAARRMIRHYLNLDTCLSQA
FEMSRYYHIPIGNLPDDISTFGSDLFFSRHLRRHNHLLWLSPTSRPDLGGKEADDNRLVM
EFDERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGGSSMSISFDVIQQASL
EDMVTGNQAANIPASYDETALCSNTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLR
SPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISY
MEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKGKVDSRIHYGEDTSKQQVLE
EEDSEEEEEEAAAGEEEGDEGELNVEELLENSWNIAQYLPQAASCQSYFLMIVSAYIVAV
YHSMKEELRRNAPGSTPVKRRTTSQVSEEALGEMGAMPGMITFSQDYVANELTQSFFTIT
QKIQKKMSGSRNATEPSDMFPVLPGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRR
DLLRLIEVGEFSEEAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGLVLPSWVC
SNCQAQYDSNAIETALVEALQKKLMAFVLQDLVCKKCHGVKETHMPVYCSCAGDFSLTIS
SKTFMEHVNVFQNIARHYGMVYLLETIE
NT seq
6566 nt
NT seq
+upstream
nt +downstream
nt
ttcatccaggaagatgggagccgcttcaaggtggccctgccttacaagccctacttctac
gtcgctacccagaagggctgtgagcgagaagtgtcttccttcctctccaagaagttccaa
gggaagattgcaaagctggaaactgtccccaaagaagacttggacctgccaaaccacttg
gtcgggctgaagaggaactacatcaagctgtccttcaacacagtggatgacttggtaaag
gtgcggaaggagatctctcctgccgtgaggaaaaacagagagcgagaccaggcgagcgat
gtctacacagccatgctgtcgagtgctctgagtggaggcagcctgagcatggatgatgag
gaggcttccagaaaggttgccaaccagatggacaacattgtggatatgcgggagtacgac
gtaccctaccacgttcgcctctccattgacttgaagatccatgtggctcactggtacaac
gtgcgataccggggcagcacctacccccccgaaatcacccgccgagatgaccttgtggag
cgaccggatcctgttgttctcgcctttgacattgaaactaccaaactccctttgaagttt
cctgatgcagagacagaccagatcatgatgatctcctacatgattgatgggcagggctac
ctgatcacaaacagggagattgtctctgaggatattgaagactttgagtttacgcccaaa
ccggagtatgagggtccattttgtgtctttaatgaacccgatgaagctcatttaatccag
aggtggtttgaacatgtccaggagacaaaacccaccatcattgtcacatacaatggagac
ttctttgactggccctttgtggaagcaagagcagcagctcatggaattaatatgtatcag
gaaattgggtttcagaaggacagccagggagagtacaaagcatcccagtgcatccacatg
gactgtctaaggtgggtgaagagagacagttacctcccagtgggaagtcacaacctgaaa
gcagcagctaaagcaaaactgggttacgatccagtggagctggaccctgaagagatgtgc
cggatggctacggaggagccccagaccctggccacctactcagtgtctgatgcagttgct
acctattacatgtatatgaagtatgtgcatcctttcattttcgccttgtgcaccatcatt
cccatggagcctgatgaggtgttaagaaaaggatctgggacactgtgtgaggcactgctg
atggttcaggcctatcatgccaacatcatcttccccaacaagcaggaacaggaattcaac
aaacttacagaagacggccacgtgctggactcggagacgtacgtgggaggccacgtggaa
gcactggaatctggggtcttccgcagtgacatcccctgccgcttcaaaatgaatcctgct
gccttcgacttcctgatgcagcacgtggagaagacgctgcggcacgccattgaggaggag
gagcatttgccattggatcaggtgaccaacttccaggaggtttgtgatgaaatcaaggtc
aaactgaattccctgaaggatgttccaaacagaattgagtgcccccttatctaccatcta
gatgtgggagccatgtaccccaacatcattctgaccaacaggttgcagccttcggccatg
gtggatgaggccacatgtgctgcctgtgacttcaacaagccaggtgccaactgtcagcgc
cggatgacatggcagtggagaggagagttcatgcctgccagccgcagtgagtaccaccgc
atccagcagcagctggagtcagagaagttccctccgctgtcccccgagggagcaccacgt
gccttccatgagctctcccgggaagaacaggccaagtatgagaaaaagcggctggcagat
tactgccgcaaggcgtacaagaagatccatgtcaccaaggtggaggaacgagtcaccacc
atctgccagcgagaaaactctttctatgtggacacggtgcgagctttcagggaccgccgc
tatgagttcaaggggctgcacaaggtgtggaagaagaagctgtctgcagcagtggagaca
ggagatgcctctgaagtgaagcgctgcaagaacatggaaatcctgtatgactccctacag
ctggcccacaagtgcatcctcaactctttctatggctacgtcatgcggaagggagctcgc
tggtactccatggaaatggctggcatcgtctgcttcacaggagcaaatatcatcacccag
gccagggaactgatcgagcagattgggagacctctggaactggataccgatgggatttgg
tgtgtcctcccaaacagcttcccagagaactttgtcatcaagtcaaccaatgccaagaag
cctaaggtgacaatctcctacccaggtgccatgctgaacatcctggtgaaggaaggcttc
acaaacgatcagtaccaggaactgcaggacccagcctccctcacctatgtcacacgctca
gagaatagcatcttttttgaagtggatggaccatacctggccatgatcctcccagcttcc
aaggaagagggcaagaagctgaagaaaaggtatgcggtattcaacgaggatgggtccctg
gctgagctgaagggatttgaggtgaagcggcggggagagctgcagctggtgaagatattc
cagtcttctgtatttgaagcctttctgaaaggcagcaccctggaggaggtgtatgcttct
gtggccaaggtagctgattactggctggatgtgctctacagcaaggctgccaacatgcct
gattcggagctctttgagctgatctcagagaaccggtccatgtcgcgcaagctggaggac
tatggggagcagaagtccacctccatcagcactgccaagcgcctggcagagttcctgggg
gaccaaatggtaaaggatgcagggctgagctgccggttcatcatttccaagaaaccagaa
gggtctcctgtcaccgagagggccatcccccttgctatcttccaagccgagcccagtgtg
cgcaaacactacctccgaaaatggctgaagagcccctcgctgcaggacttcaacatccgt
gcgatcctggactgggactactatattgagagactgggcagtaccatccagaaaatcatc
accattcctgcagctctgcagcaggtaaagaacccggtgccacgggtccggcatccggac
tggctccacaagaaactcctggagaagaatgatgtgtacaaacagaaantcctgctgtcc
ttgttccctcaggtcctcgccaaccagcccccagaggggacacccagctcacagattagt
gacatagaggactttggggctgctaagacccttcagccaccggttccaatcacaaataag
cggaagcgagtccctgccgcacaggaaagccaacagatgtcccagtacctggagctatcc
cagtcctggcgagagatcctgggtccacctccacctctggggaccaccaaggaagagagg
ctggtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcaggag
cggcggnnnnnnnnnnnnnnnnnnnnngggntgacagcaggtggaggagtggtgcgcgat
gccctttccaaagggctgagcagctacctacgcaggacagcacgcagcatcctggacttg
ccctggcagatcgtgcagattgctgagaccagccagcctgggctgttcaggctgtgggca
gtgatcgggaacgacctgcactgtatcaagctgagcatcccccgggtcttctacgtcaat
cagcgcgtcccaaagccggaggagggagcagcctacaggaaggtgaacaggatcctgccc
cgctcaaacttagtttacaacttgtatgaatactctgtccctgaagacatgtaccaagag
cacatcaacgaaatcaatgcggacctctctgctccagacattgagggggtgtatgaaacg
caggtgccactcctcctccgtgccctgatccacctgggctgcgtgtgcatggtcagcagg
cagctcgtcaggcacctgacagggcgagaggctgaaacctttgacattgagcacctggag
atgcgctcactggcccagttcaattacctggagccaggaagtattcgccacatctacctc
taccacagctcccagggcagcaaggcgctcttgggccttttcatcccctcgcagtgcaaa
gctgctgtctttgtgctggacaaggtacgcagcaaccagatgccaaatcttaccaccctc
ttctcggtggagcgcagcgcgctgctggaaaaggtgggcgaagagctgctgcccccggac
aagcacactttcgaagtgcgcgccgagaccgaccccaaagccatctatagagccgtccag
cggctgctgctgggctacaaggtgagatgaaggttcaaggaaggtccnnnnnnnnnnnnn
nnnnnnnnnnnntgggacctgaaacggctggcaagcgtgatccccatcattgaggagttc
cccttggtccccatccgtctggtagatgacatcagctatgcggtcctggactggcagcgt
cacgccgctcgccgtatgatccgccactacctcaacctggacacctgcctctcccaggct
tttgagatgagcaggtactaccacatcccgattgggaacctccctgatgacatctccacc
tttggctctgacctgttcttctcgcgccacctccgtcgtcacaaccacttgctgtggctc
tcacctacatcccgcccagacctggggggtaaggaggctgatgataaccgcctagtcatg
gagtttgatgagagagcttctgtggagataaacaaccctggctgctactccacagtgtgt
ctggagctggacatccagagcctggctgtaaacacggtgttgcagtcccaccacataaac
gacatggaaggaggctccagcatgagtatcagctttgacgtgattcagcaggcatcccta
gaagacatggtgacggggaaccaagctgccaacatcccggccagctatgacgaaactgcc
ctctgctccaacacgttcaggatcctgaagagcatggtggtgagctgggtgaaggagatc
acgcagtatcacaacgtctacgcagacaaccaggtcattcacttttaccgctggcttcgc
tctccttcctccctgctctacgacccggcactgcaccgcacgctccacaacatgatgaag
aagctcttcctgcagctggtggctgagttcaagcgtctgggctcctcggtggtttacgcc
aacttcaaccggatcattctgtgcacgaagaagcggcgcatcgaggatgccatcagctac
atggagtacatcatcaacagcatccactctaaggagatcttccactctctgaccatctcc
ttctctcgatgctgggagttcctgctctggatggatccagcaaattatggaggtatcaag
ggaaaagtggattctcgcatccactatggggaggacaccagcaagcagcaagtgttggaa
gaggaggacagcgaggaagaggaggaggaggcggcggcaggggaagaagagggggacgaa
ggggagctgaatgtggaggagctgctggagaacagctggaacattgcacagtacctgccc
caggctgcctcctgccagagctatttcctgatgattgtgtcagcctacattgtggctgtg
taccacagcatgaaggaggagctgcggcgcaacgcccccgggagcacccctgtcaagagg
aggacaaccagccaggtgtccgaggaggcactgggggagatgggggccatgcccggcatg
atcaccttctcgcaggattacgtggccaatgagctcacccagagcttcttcaccatcacc
cagaagatccagaagaagatgtctggttctcgtaatgccactgagccttcagacatgttc
ccggtgctgcctggctcctacttgcctctcaacaacccggctctggagttcatcaaatac
gtttgcaaggtcctctccctggatgccaacataaccaaccaggtgaacaaactgcgccgg
gacctgctgcgcctcatcgaggtgggcgaattctcagaagaagcccagtttcgggaccct
tgccgctcctacgtgctccctgaagtcatctgcaggaactgcaacttctgcagggacctg
gacctgtgcaaggaccctgccctctcccaggatgggttggtgctgcccagctgggtctgc
tccaactgccaggcacagtatgactccaatgctattgaaacagcgctggtggaagccttg
cagaagaagctgatggcctttgtgctgcaggacctggtgtgcaagaagtgtcacggcgtg
aaggagacgcacatgcctgtgtactgcagctgtgctggagacttctccctcaccatctct
tccaagaccttcatggagcacgtcaacgtcttccagaacatagcgcggcactacggcatg
gtctacctgttggaaactattgagtg
DBGET
integrated database retrieval system
