Phalacrocorax carbo (great cormorant): 104045460
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Entry
104045460 CDS
T08596
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104045460 (SNAPC4)
03021 Transcription machinery [BR:
pcao03021
]
104045460 (SNAPC4)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
104045460 (SNAPC4)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
104045460 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SANT_DAMP1_like
SLIDE
Motif
Other DBs
NCBI-GeneID:
104045460
NCBI-ProteinID:
XP_009503726
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
DDSSDDDIESSLPQDPETCLQMNHVYQEVIQEKIEEVELLIAQNKEQQKEIMCELGGPKI
AKAGDGRNLPTNIFLGHFMKPYFKDKTTGIGPPSNEDTKEKAAQGIKSFEQLLSKKWKSR
EKTLLQKSIASDRLQRLLQPKLLKMSYWNQKLEKVKTEMEKQILEKQIKELEQEIEAINQ
LPESDLLGNRFDEHDWEKISNVHFDGQRSSEELRKFWQNWEHPSINKKEWTEEEIERLKT
IAAKHGYLDWQTIAQELGTNRTPFQCLQKYQVYNKDLKRKEWTKDEDQMLLELVQEMRVG
SHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLKKGPWTPEEDAMLLAAVKKYGERDWYKI
RTEVPGRSDAQCRDRYLKALHCDVKKGKWSLEEEEQLIELVQKHGLGHWSKIASELPHRT
GSQCLSKWKLMIGSKKRSRPTKRRHVQESSSSSESSSEDIELDFADSSEEETTSKEERVF
PSIDLWIPTRTNMKEPNEGRYQTPSLFSPASADAKTGSSEVPSAASELNTLLRGIARPHS
TDIVVKNPVEVMNKASRCGKQVLQVTLENVRRVLRNNTCFQRRLQSKILKPSATVLTKVS
GVGTSVGQKLQGLQNITEKTYRQERERLRRMNLDRKLLMAVTPWVGNVLLPCTLQTGKMA
FHQTKADSIQEKIKSVSLASTPLFTLFIQLFQIDTNGCMKIIRERRLRQSELLGANARRP
QQASQNTETSSGSSSQPCTQRNSRRGIPRNAVRRPVALKARETSAALQSSAPAVQGAPPA
QVQRQKPKTVSELLREKRLRESRAKKAMQRTVFVAPQVLVSGPLIIQHPPQRIIPSAQAG
SKPAAVGCTNSEVQCAPAPLPAFTSVAGSTSAAVLENHSSSVPETGESPGSSQGTELQSS
KELKEQALESSSEGGVFPGTNPAAAEQAPHQGGCNGQVVAGSSASVVLQNQAFVPHQITV
VPVGIESGTNKLSLSTPVTCDLNSNGSQQRPVNLLPAIVTPQTGSHLIPSSILPFAWVVT
PQALLPTAVQTVVGVPQGLPAAAVRSQCPTTVTSDGNVSGLGVPPVPAGANTPHPSSAET
KAPSAQLAEGVPLGKTANHSTVLLPVTSASPGCTTSSAAPACSGGFSKASDPSAAQSALP
PDAPALHAVLLPQTQLPASTQGSDSQCVSSLTSLGKSHDATTTSGSSSNASVVVKGTVLQ
PGDPVPHNNVPRNSDCFAAQALKNRPIAAKPPTAQPADSPPQPATSSAEKNQLDFSLISL
EDEGLVKEWLTGKQGVRVPSLQTRLPYLPPFLCNLKTLSKLLLQKAALEEQAACLLPSDA
NQDEGTGVDLHAIRELVQQKLGDNPAYLLLKARFLAAFTLPAVLATLPPPKVTTTLSASR
KQYEESDEEEWQSEEDVSEEESCGNELTGVRLDWTVGDEPGDKDADLLNQGMGAEENAAQ
SVLDSCTDVADASAPQIRRSARFRKRRRM
NT seq
4412 nt
NT seq
+upstream
nt +downstream
nt
aagatgacagtagtgatgatgatattgaaagtagtctgccacaggatccagaaacgtgtc
tgcagatgaaccatgtgtaccaggaagttatccaggaaaagattgaggaagtcgagcttc
tcattgcacaaaacaaagaacagcagaaggaaatcatgtgcgagcttggtggtccaaaaa
tagcaaaggcaggagatggtagaaatctaccaacaaacatatttttgggtcattttatga
agccatactttaaggataaaacgacaggaattggccctccttccaacgaagacaccaagg
aaaaggcagctcagggcataaaatcctttgaacaactgctttcaaaaaaatggaaaagca
gagagaagacattattgcagaaatcaatagcaagtgaccgcttgcagcgcctgcttcagc
cgaagttactgaagatgagttattggaaccagaaactggagaaagtcaagactgaaatgg
agaaacagatcttggaaaagcaaatcaaagaactggagcaagaaatagaggcaattaacc
aactcccggaaagtgacctgttagggaacagattcgatgagcatgactgggagaaaattt
caaatgtccactttgatggacaacgtagttcagaagaactgaggaagttttggcaaaatt
gggagcatccaagcatcaacaaaaaggaatggactgaggaggaaatagagaggctaaaga
cgatagctgctaaacacggttatctggactggcagactatagcccaggagttggggacaa
acaggacacctttccagtgcttgcagaagtatcaagtctataacaaagatttgaaaagga
aagaatggaccaaagatgaagatcagatgcttttggagcttgttcaggagatgagagtag
gaagtcatattccatacaagaaaattgcttattacatggaaggaagagattctgctcagc
tgatttaccgatggacaaagagcgtggatcccagtttgaagaaaggaccctggacaccag
aggaagatgctatgctgttggctgcagttaagaagtatggagagcgtgactggtataaaa
ttcggacagaagtgccagggaggagcgatgctcagtgcagagaccggtacttaaaagcat
tgcactgtgatgtaaagaaaggcaagtggagtttagaggaagaagagcagctaattgaac
tggttcaaaagcatggcctgggtcactggagtaaaatagcttctgaattgccccatcgga
ctggctcccaatgtctaagcaagtggaagctcatgattgggtcgaagaaaagatctaggc
caacaaaacgccgacatgtgcaagagagttctagctcttcagagagtagcagtgaagaca
tagaactggatttcgcagacagttcagaggaggagacaacgagcaaggaggaacgtgtat
ttcccagcattgatttgtggataccaacacggacaaatatgaaggagccaaatgaaggac
gataccaaactccatcccttttctctcctgcgagtgctgatgcaaagaccggtagcagtg
aagttccaagtgcggcgtcggagttgaacaccctcctgaggggcattgcacgtccgcatt
caacagacatcgttgtgaagaatccagtagaagtaatgaacaaggcttccagatgtggaa
agcaagtgctacaggttaccctggagaatgtgagaagagtattaagaaataatacatgct
ttcagaggagacttcaatcaaagatactaaaaccttctgccaccgttttaacaaaagtat
ctggagttggtacgtctgttggccagaagcttcaggggctgcagaatatcacggagaaaa
cttaccgtcaagagagagaacgtttgagaagaatgaaccttgacagaaagcttctaatgg
ccgtgacaccttgggtgggcaatgtactcctgccttgcaccttgcaaacggggaagatgg
cttttcatcagacaaaagctgattctattcaagagaagattaagtcggtcagtctcgcga
gcactcctctgttcacgcttttcattcagctctttcagattgataccaatggctgcatga
agattattcgtgagagaaggctaaggcagtcagagcttcttggggctaatgcaagaaggc
ctcagcaggcttcccaaaatacggagacttcttcaggcagttcgtcacaaccttgtactc
agaggaactcccgaaggggcataccaaggaatgctgtcaggagaccagttgccttaaaag
caagggagacttctgctgccttgcagagcagtgctcctgccgtgcagggagctcctccag
cccaagtgcaaaggcagaagcctaaaactgtctcagaattactgagagaaaagcggctaa
gagaatcccgggctaagaaagctatgcagaggacagtatttgttgcccctcaggtgctgg
tttcgggacctctgataatccagcacccaccacagcgaatcattccttctgcacaagcag
ggagcaaacctgcggcagttggttgtacaaatagcgaagtacagtgtgcaccagctccat
tgccagcatttacttctgttgcaggttcaacttctgctgctgtgcttgaaaaccattcct
catcagtgccggaaaccggggaaagccctggttcctcacaagggacagaactccagtcca
gtaaggaactaaaagagcaagctttggaaagtagctctgaaggaggggtttttccaggca
caaatccagctgcagcagagcaggccccgcatcagggagggtgcaatggtcaggtcgtag
ctggtagctcagcttcagtggtgttgcaaaaccaagcttttgtgccacatcagattacag
tggtgcctgttggcattgagtctggcaccaacaaattgtctctttccacaccagttacct
gcgacctgaatagtaatgggtcacaacagaggccggtcaatctattgcctgctattgtaa
ctccacaaactggttcgcatttgattcccagcagcatactgcctttcgcgtgggttgtaa
cgccacaggctttgctccccaccgctgtacaaactgtggtgggcgttccccaaggactgc
cagctgctgctgtgagaagtcaatgtccgacaaccgtgacttctgatggcaatgtctctg
gcttaggagtgcctcccgtaccagctggagcaaatacacctcaccccagcagtgcagaga
caaaagcaccgagtgcccagctagcagaaggagtacctttgggaaagacagctaaccatt
ccacagttctcttacctgtgacctcagcaagtcctggatgcaccacatcttctgcagcgc
ctgcatgttcaggtggcttctccaaggcttcggacccctctgcggctcagagtgctcttc
cacctgatgcacccgccctgcatgctgtgctgctgccgcaaacacagctacctgcaagca
ctcaagggtctgattcccaatgtgtgtcaagtctcactagcttggggaagagccatgatg
ccactacaacaagcggatcatcctccaatgcgagcgttgtcgtgaaagggactgtgctcc
agccaggagatccagttccccataacaatgtcccaaggaactctgattgctttgctgcac
aagcattgaaaaatagacctattgctgccaaacctccaactgcgcagcctgctgacagtc
ccccccagccagccacttcgagcgcagaaaagaatcaacttgactttagcctcatttccc
ttgaagatgaggggctagtgaaggagtggctgactgggaaacaaggtgtccgggtaccat
cactgcaaaccaggttgccttatttgccaccttttctgtgcaatttaaaaaccctctcaa
agctacttctgcagaaagcagctctagaagagcaagcggcatgtcttctgccttctgatg
ccaatcaggatgagggcactggggttgatttgcacgctatcagagagctggtgcagcaga
aactcggcgataaccctgcttacctcctactgaaagccagattcctagcagcctttacac
tcccagctgtactagcaactctgcctcctccaaaagtgacaacaactctgtcagccagca
ggaagcaatacgaagagagtgatgaagaggagtggcagagcgaggaggacgtgtctgagg
aagagagttgtgggaatgaattaacaggtgtacggttggattggacagttggagatgagc
ctggagataaagatgctgatttattaaatcagggcatgggagctgaagagaatgctgcac
agtctgtcttggactcctgcactgatgtggctgatgccagtgctcctcaaatcaggagaa
gtgcccgcttcaggaaaaggaggaggatgtga
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integrated database retrieval system
