Phalacrocorax carbo (great cormorant): 104045865
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Entry
104045865 CDS
T08596
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcao03041
]
104045865 (RBM39)
Spliceosome [BR:
pcao03041
]
Common components
Common spliceosomal components
General mRNP proteins
104045865 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
104045865
NCBI-ProteinID:
XP_009504205
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
SGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQ
LAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVL
GVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESI
QLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFL
DSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQ
QNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDK
NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVP
VRR
NT seq
1273 nt
NT seq
+upstream
nt +downstream
nt
ttctggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaa
attaagcagacgacgctccagaagcaaaagccccttcagaaaagacaagagtcccgttag
agaacctattgataatcttacccctgaagagagggatgctcgaacagtgttctgcatgca
gctggctgcaagaattcgaccgagagacctggaggaatttttctctacagtaggaaaggt
tcgtgatgtgcgaatgatttcggatagaaattctaggcgttcaaagggaattgcttatgt
ggagtttgttgatgttagttcagtgcctctggcgataggactaactggacagagagtctt
gggtgtgccaatcatagtacaagcctcacaggcagagaaaaacagagcagcagcaatggc
aaacaatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcattacactt
caacataactgaagatatgcttcgaggaatttttgagccgtttggcaggattgagagcat
tcaactaatgatggatagtgaaactggacgctcaaaaggatacggatttattacgttctc
cgactcggagtgtgccaagaaggccttggaacaactcaatggatttgagctggctggtag
gccaatgaaagttggacacgtcactgagcgcactgacgcttctagtgctagctcgttttt
ggacagtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagtt
gatggcaagacttgcagaaggtactggtttgcagattcccccggctgcacagcaggctct
gcagatgagtggatctttggcatttggagctgtggcagatttgcaaacgagactatctca
gcagaatgaagttctggctgcagctgcttctgtacaaccacttgcaacacagtgcttcca
gctttccaacatgtttaatcctcaaactgaagaagaagctggctgggatacagaaattaa
agatgatgtgattgaggaatgtaacaaacatggaggagttatccacatctatgtagacaa
aaactcagctcagggcaacgtttatgtcaaatgtccttcaattgctgctgccatcgcagc
tgtcaatgcgttgcatgggaggtggtttgcaggtaaaatgattactgcagcgtatgtacc
tcttccaacataccatagccttttcccagattccatgactgcaacccaactactggttcc
tgttcgacgatga
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