Phalacrocorax carbo (great cormorant): 104045916
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Entry
104045916 CDS
T08596
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03020
RNA polymerase
pcao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104045916 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104045916 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104045916 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104045916 (POLR2B)
Enzymes [BR:
pcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104045916 (POLR2B)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104045916 (POLR2B)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104045916 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
104045916
NCBI-ProteinID:
XP_009504263
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
WIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHATGEVEEPPRYLL
KFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTVIKEGEDQLQTQHQK
TFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVY
VFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQE
VPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGA
KPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRD
HYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKY
SLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLW
GMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATK
IFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLL
IVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKG
VAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDT
LAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFF
RSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVI
IGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSV
RIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQ
GKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPT
YYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRER
LFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMS
IAPRMMSV
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
tggattgttattagctcctactttgatgaaaagggtttagtcaggcaacagttggattct
tttgatgagtttattcagatgtctgtgcagagaattgttgaagatgctccaccaattgat
ttacaagctgaagcccagcatgccacaggagaagtggaagagccgccccggtatctgttg
aagtttgagcaaatctatctctccaaacctacgcactgggaaagagatggagcaccttca
cctatgatgcccaatgaagccagactgagaaaccttacgtattcagcccccttgtatgtg
gacataactaaaacagttattaaagaaggggaggatcagttacagacacagcatcagaaa
acttttataggaaaaattcctattatgttgcgttcaacatactgtttgttaaatggctta
actgaccgtgatctttgtgaactgaatgaatgcccgcttgatcctggtggctactttatc
attaatggatcagaaaaggttctgattgctcaagagaaaatggctacaaacacagtatat
gtgtttgcaaagaaggattcaaaatatgcctacacaggagagtgtagatcttgtctggaa
aattcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggt
gcgaagaagagtgctattggtcagcgcattgtagcaactttgccgtatatcaaacaagaa
gtccccatcataattgtctttcgtgcactaggctttgtgtctgacagggacattttagag
cacatcatatatgattttgaagatccggaaatgatggaaatggtcaaaccttctctggat
gaagcgtttgtcattcaggagcaaaatgttgctctaaatttcattggatcaagaggtgca
aagccaggtgtcaccaaagaaaagagaatcaagtatgctaaagaagtcttgcagaaagaa
atgctcccgcatgttggtgtcagtgacttctgtgaaaccaaaaaggcctattttctaggg
tatatggttcatagattgctgctggcagcactgggaagaagggagcttgatgacagagat
cattatggcaacaaaagactggatcttgctgggccgctgttagctttcctgttcagagga
atgtttaagaatttgctgaaggaagtgagaatttatgcacaaaagtttattgacagaggg
aaagacttcaacttggaactggcaattaaaacaagaattatttcagatggtttgaagtat
tcattggcaactggaaactggggtgaccagaagaaagcccatcaggccagagcaggagta
tctcaggtgttaaaccgcctgacttttgcatctacgctctcccatctgagacgcctgaat
tctccaattggtagagatggtaaactggcaaagcccagacagctgcacaatacactgtgg
ggcatggtttgccctgctgagactcctgagggtcatgcagtaggacttgtgaagaactta
gccctgatggcttacatttctgtggggtctcagccatccccaattttggaattcttggaa
gagtggagtatggaaaacctggaagaaatatctccagcagcaatcgctgatgctaccaag
atctttgtcaacggctgctgggtaggaatacacaaagatccagagcagctcatgaatacc
ctgaggaagctccgtcgtcagatggacatcattgtgtcagaggtctcaatgattagggat
attcgtgaacgagaaatccgcatctatactgatgcaggcagaatttgccgacccctttta
attgtggaaaaacagaagttgctgttaaagaaaaggcatattgaccaactgaaggaacga
gagtataacaattacagttggcaggatctcgtggccagtggtgtagtggagtacattgat
acactggaagaagagactgtgatgctggcaatgactccggacgacttgcaagagaaaggt
gtggcatattgttcaacatatacacactgtgagattcacccatctatgatcctgggagta
tgtgcatctattatccctttccctgatcacaaccagtctcccaggaacacataccagtct
gctatgggtaaacaggctatgggagtttacattactaacttccatgttcgtatggatacg
ctggcacatgtgttgtattatcctcagaagccccttgtaacaacacgctccatggaatac
ttgcgatttagagagttaccagcaggtatcaactcgattgtagccattgcgtcgtacaca
ggctataaccaggaagactctgtcatcatgaatcgttctgctgttgacagaggctttttc
cgatctgtgttctatcgctcctacaaagagcaagagtctaaaaaagggtatgaccaagag
gaagtttttgaaaagcctacacgtgaaacttgtcaaggtatgagacatgcaatctatgac
aaacttgatgacgatggtttgatagcacctggggtacgtgtgtctggggatgacgtcatt
attggcaaaacagtaacactgccagaaaatgaagacgaactggaaagcactaacagacgt
ttcacaaagagagactgtagcacttttctgcgaactagtgagactggtattgtagatcag
gtcatggtaaccctcaaccaggaaggatacaagttctgcaagatcagggtacgctctgta
agaatcccacaaattggagataaatttgccagcagacatggtcagaaaggaacctgtggt
atccagtacaggcaagaggatatgcccttcacctgtgaaggcatcacacctgatataatt
atcaacccccatgccatcccttcccgcatgaccattggtcacttgattgagtgtcttcag
gggaaggtgtctgcaaacaagggagaaattggtgatgctacaccttttaatgatgctgtc
aatgtgcagaagatttccaacctgttatcagattatggctatcatctaagaggaaatgag
gtcctctacaatggcttcacgggtcgaaaaatcacatcacagatcttcattggtcctaca
tattatcagcgattgaagcacatggtagatgacaaaatccattctcgtgcaagagggcca
atccagatacttaacaggcagcccatggaaggtagatctcgtgatggtggccttcgtttt
ggagaaatggaacgagattgccagattgctcatggagcagcccagttcttgagagagagg
ttgtttgaagcttcagacccataccaagtccatgtctgcaacctctgtggaatcatggcg
atcgcaaacacaaggactcacacctatgaatgtcggggatgccgtaataaaactcagatc
tctctggttcggatgccctatgcctgcaaactcctcttccaagaactgatgtctatgagt
attgcacctcgtatgatgagtgtttag
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integrated database retrieval system
