Phalacrocorax carbo (great cormorant): 104046313
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Entry
104046313 CDS
T08596
Symbol
SCN8A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104046313 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcao04040
]
104046313 (SCN8A)
Ion channels [BR:
pcao04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104046313 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
ATP-synt_B
SieB
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104046313
NCBI-ProteinID:
XP_009504731
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKHIAELKKKQRPKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKNEERRAQSASGAFASPLWVPGGRHAATE
LFAVVRLFMGRQIVPLLASSRRRCRGKQRFRAVIRFSATPALYILSPFNLFRRIAIKILI
HSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFL
RDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK
LSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETLLDNGSRGFDWEEYTNNMS
NFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQD
FWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEA
EFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERQ
NRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPG
SPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGKXTGADG
ANTHGSRSSRIFPNLRRNVKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIRKKP
GGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECH
PYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIF
TAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAK
SWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPECELPR
WHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALL
LSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDE
LYDKKVNCIANHTGADINRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRV
PIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLD
PDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALA
FEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVVV
NALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEERFEIEVVNNKTDCE
ALMPPNSTEIRWKNVKINFDNVGAGYLALLQVVSFAFTISLVV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccctgatagttttaaacccttcactccagag
tctctggctaacattgagaaacacattgcagaattaaaaaagaagcagcgtccaaagcaa
gacagcagccaccgggatgacgatgaggacagcaaaccaaaaccaaacagtgaccttgag
gcggggaagaatttgcctttcatctacggggacatcccgaaaggcctggttgctgtacca
ctggaggactttgacccttattatatgacccagaaaaatgaggaaaggagagcgcagtcg
gcgtcgggcgccttcgccagtccgctctgggtgcccggtggaaggcacgctgcaacggag
ttgtttgctgttgtacggcttttcatggggcggcagatcgtgccactgcttgcatccagt
cgaaggcgatgccgtggcaagcagcgctttcgtgctgtgatcaggtttagtgccacacct
gccttgtacattttaagtccttttaacctgtttagaagaatagctattaaaattttgata
cattcagtatttagcatgatcataatgtgcactattttgaccaactgtgtattcatgact
tttagtaacccacctgaatggtcgaagaatgtggagtatacattcactggcatttataca
tttgaatcacttgtgaaaattattgcaagaggtttctgtatagatggctttactttcctc
cgtgatccatggaactggctagatttcagtgtgatcatgatggcgtatataacagagttt
gtaaacctaggcaatgtttcagctctgcgcactttcagggttctgagagctttgaaaact
atttctgtaattccaggcttgaagaccattgtgggggccctaattcagtctgtgaagaag
ctgtcagatgtaatgatcttgacagtattctgtctcagtgtctttgctctgatcgggttg
cagctgtttatgggcaatttaaggaacaagtgtgtgatatggccgattaacgtgaatgag
acgctcctggataacggctccaggggctttgactgggaggagtacaccaacaatatgtca
aatttttacataattcctggcgcccctgatccgttgctctgtggtaacagctcagatgca
ggtcaatgtccagagggttacacgtgcatgaaggcaggacggaaccccaactatggctac
acgagctttgatactttcagctgggcttttctggctttatttcgccttatgactcaggac
ttttgggaaaacttgtatcaattaaccttacgagcagcaggaaaaacctacatgatcttc
tttgtcttggtgatctttgtgggatcgttctatctggttaatctgattttggctgtggta
gctatggcttacgaagagcagaaccaggccacgctggaggaggcagagcagaaggaggcg
gaatttaaggccatgttagaacagttgaaaaagcagcaggaggaagcacaggctgctgct
atggtcacttcggcagggacagtctctgaagatgctgtggaagatgatggtggggggagg
atgtctcggagctcttcggagatttccaaactcagttccaagagtgccaaggagcgtcaa
aacaggaggaaaaaacgaaaggacaaggaactgtcagaaggagatgagaagtgtgacaat
gaaaaggtgttcaagtctgaatctgaggatggcatgaggaggaaagcattcaggctacca
gataacaggctaggaaggaaattttccatcatgaaccagtctctcctcagtatcccaggc
tccccttttctctcccgacacaatagcaagagcagcatcttcagctacaaggggcgattt
cgtgacccaggttcagagaacgagtttgccgatgacgagcacagcacagtggaggaaagc
gaaggcaggagagactccctcttcatccccatccgcggaaaanaaaccggcgccgacggc
gccaacacccacggcagccgctcctcgcggattttccccaacctccgccgaaacgtgaag
aggaacagcacggtggattgtaacggcgtggtgtccctcatcggtggcccaccttccagc
atgcctgggggacgccttctgcctgagggtactactgaaatcgaaattagaaagaaaccc
ggtgggtctctcttggtctcgatggatcaggtgaatgcgtcctatggaagaaaggatcga
accaacagtgtaatgacggggttgaccaatacccttgttgaggagctggaagagtcccag
aggaagtgtcccccttgctggtacaaatttgccaacacgttcttgatctgggagtgccac
ccctactggatcaagctgaaggagatagtgaacttaattgtcatggatcctttcgttgac
ttggccatcaccatctgtattgtgctgaacactttgttcatggcaatggagcaccatcct
atgaccccggagtttgaacatgtgctctccgtaggaaatctggttttcactggaattttc
acagcagaaatgttcctgaagctcattgccatggatccctactattatttccaagaaggc
tggaacatctttgatggatttattgtctccctcagtttaatggaactgagtctagcagat
gtggaaggactttctgtgctgcgatctttccgattgttgagagtcttcaaactggccaag
tcctggcctactctgaacatgctgataaaaatcatcggtaactcagtgggtgctttgggg
aacttgaccttggtgctagccatcatcgtgttcatctttgctgtggtgggcatgcagctc
ttcggcaaaagctacaaggagtgtgtctgcaagatcaatccggagtgtgagctaccccgc
tggcacatgcacgatttcttccactccttccttattgtcttccgtgtgttgtgtggggaa
tggattgagaccatgtgggattgtatggaagtggcaggacaggccatgtgcttgattgtc
ttcatgatggtcatggtcatcggaaatttagtggtgctgaacctcttcttggccttgctg
ctgagctccttcagcgcagacaacttagcagcaacagatgatgacggggagatgaacaac
ctgcagatatctgttattcgcatcaagaagggcattgcctggaccaaggccaaagtgcgt
gagttcatgcaggctcatttcaagcagagagaggcagatgaggtcaagcccttggatgaa
ttgtatgacaagaaggtgaactgcatcgctaaccatacaggggccgatatcaacagagac
attgattatcagaagaacggcaatggcacgacgagtggaattgggagcagtgtggagaag
tacataatagatgaagatcacatgtccttcatcaataaccccaatctcactgtccgggta
cctattgctgtaggtgaatccgattttgaaaatctcaacacagaagatttcagcagtgat
acagaccctgatggcagcaaagagaaactcgatgataccagctcctctgaaggtagcacc
attgatatcaagcccgaagtggaagaggtccctgtggaggcaccagaggagtatctggac
ccagacgcatgcttcacagaaggttgtatgcagcgctgtaagtgttgccaggtgaatatt
gaggaagggctggggaagtcctggtggaccttgcggaagacttgttttctgattgtggag
cataactggtttgagactttcatcatcttcatgatcctactgagcagtggtgctctggct
tttgaggatatttacatagaacagagaaaaaccatccggaccatcttggagtacgcggac
aaggtcttcacctacattttcatcctggagatgttgctgaaatggtgtgcttacggattt
gtcaagttcttcactaacgcctggtgctggctggatttcctcattgtggctgtggttgtc
aacgccttggttggcgctatcccttccattatgaatgtgttgttggtctgccttatcttc
tggctgattttcagcattatgggggttaacctgtttgccgggaaatatcattactgcttt
aatgaaacagctgaggagcgctttgaaatagaggttgttaacaacaagacagactgcgaa
gcactgatgccacccaactccactgagatccgatggaagaatgtgaaaattaactttgac
aacgttggggcaggatatctggctcttctgcaagtggtaagttttgctttcaccatctcc
ctagtagtg
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integrated database retrieval system
