Phalacrocorax carbo (great cormorant): 104046394 Help Entry 104046394         CDS       T08596                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao03040   Spliceosome Brite KEGG Orthology (KO) [BR:pcao00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104046394 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcao03021]     104046394 (SF3B3)    03041 Spliceosome [BR:pcao03041]     104046394 (SF3B3)    03036 Chromosome and associated proteins [BR:pcao03036]     104046394 (SF3B3) Transcription machinery [BR:pcao03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      104046394 (SF3B3) Spliceosome [BR:pcao03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     104046394 (SF3B3)  Complex B     104046394 (SF3B3)  Complex C    U2 SnRNP specific factors     104046394 (SF3B3) Chromosome and associated proteins [BR:pcao03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      104046394 (SF3B3)     TFTC complex      104046394 (SF3B3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CPSF_A Beta-prop_RSE1_2nd Beta-prop_RSE1_1st Motif Other DBs NCBI-GeneID:  104046394 NCBI-ProteinID:  XP_009504821 LinkDB All DBs Position Unknown AA seq 1084 aa AA seqDB search AIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEAD NDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSE NYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKI TLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEF SSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDTPQLYVACGRGPRS SLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEE VTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQ VVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNT VRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGV LLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTP LSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPE SNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFG APKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDEWYVLVGVAKDL ILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLG KKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWV TTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIM NYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP PLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRTPPEVSKKLEDIRT RYAF NT seq 3257 nt NT seq  +upstreamnt  +downstreamnt gtgcgattgaaaagcagaagctggtttatatcttgaacagagatgctgctgctcgtctca ccatttcctccccactggaagcacacaaggccaataccttggtctaccatgtggtgggag tcgatgtgggatttgaaaaccccatgtttgcttgcctggaaatggattatgaggaagcag acaatgatcccacaggagaggcagcagccaacacgcagcagacattgacgttttatgaac tggacttgggtttgaaccacgttgttaggaaatacagtgagcccttggaagagcacggca acttccttataacagttcctggtggttctgatggaccaagcggagtgctgatctgttctg aaaactatattacgtataaaaacttcggtgatcagcctgatatcagatgcccaattccca ggagacggaatgatctggacgacccagagagaggtatgatttttgtctgctctgctacgc ataagaccaagtccatgttcttcttcctggcccagactgagcagggagacatcttcaaaa ttactctggagactgatgaagacatggtaacagagattcgactgaagtactttgacaccg ttcctgtcgctgctgccatgtgtgtgctgaaaacaggatttcttttcgtggcatctgaat ttggaaaccattacctgtaccagatagctcacttgggtgatgatgatgaggagccagagt tctcttctgccatgcctcttgaggaaggagatacgttcttctttcagccaagacctctca agaacctggtgctggtggatgagttggacagtttgtctcctattctttgttgtcagatag ctgatttggccaatgaagacacaccccagttatacgtggcttgtggtcgggggccccggt cgtctctgagggttctaagacatggacttgaggtgtctgaaatggctgtgtcagagctgc ctggtaaccccaatgctgtatggaccgtgaggagacatgttgaagatgaatttgatgcct atatcattgtgtccttcgtaaatgccacactggtgctgtctatcggagaaactgtagagg aagtgactgactctggattcctgggaactacacccaccttgtcctgctctcttcttggcg atgatgctttggtacaggtatatccagatggaatccggcacatccgagcagacaagaggg taaatgaatggaagacgccagggaagaaaacgattgtaaaatgtgctgtgaaccagagac aagtagtgatagcactgactggaggagaactggtttactttgagatggacccgtcaggac aattgaatgagtacacagagagaaaggagatgtcagccgatgtagtttgcatgagcctgg ccaatgttccccctggggagcagcgctcccggttccttgctgttgggctggtggacaaca ctgtcagaattatttcccttgacccttcggattgcttacagccactgagtatgcaggccc ttcctgcacagcccgagtcgctgtgcattgtggagatgggtggcacagagaagcaggacg agctgggggagaggggctccattggctttctgtacctgaacattggactgcagaatggtg tgctgctacgaactgtcctggatcctgttactggtgatctttctgacaccaggaccagat accttggctcacggcctgtgaaactcttccgtgtccgaatgcaaggccaagaggcggtgc tggccatgtcaagccgttcctggctcagttattcctatcagtcacgcttccacctgactc ctctgtcttatgagacactcgagtttgcatctggttttgcttctgagcagtgcccagagg gcattgtagccatctccacaaacacgttgaggattttggcactggagaagctgggggcag tcttcaaccaggttgccttccccttgcagtacacaccccgaaaatttgtcattcacccag agagcaacaacctgatcatcattgagacagaccacaacgcttacactgaggccaccaagg cacagaggaagcagcaaatggccgaggaaatggtggaggctgcgggtgaggatgagaggg agttggcagcagagatggctgcggcctttctgaacgagaatcttcccgagtccatctttg gtgctcccaaggcagggaatggacagtgggcctctgttatcagggtgatgaaccccatcc agggaaatacattagatctggtccagctagagcagaatgaagctgccttcagcgtggctg tgtgccggttctccaatactggtgatgagtggtatgtgctagtgggagttgccaaggacc tgattctgaacccacgctcggttgctgggggttttgtctacacgtacaagctggtgaata gtggtgagaagctggaatttctgcacaagacccctgtggaggaggttcctgcagccatcg ctccgttccaaggtagagtcttaattggagttggaaagctcttgcgtgtttatgacctgg gcaagaagaaactgcttcggaagtgtgagaataagcacattgccaactacatctgtggga tccaaaccattgggcacagagtaattgtttcagacgttcaggagagcttcatctgggtgc gctacaaaaggaatgagaaccagctcatcatctttgctgatgacacttatccccggtggg tcactacagcaactctcctggattatgacactgtggctggagcagacaagtttggcaaca tctgcgtggtgagactgcctcccaacactaatgatgaggtagatgaggatcccacaggca acaaagctctctgggacagggggctgcttaacggagcatcgcagaaggctgaagtgatta tgaattatcatgtgggagagacagtgctttccttacagaagaccacgctgatcccaggag gctctgaatctcttgtctataccaccttgtcgggagggataggaatcttggtccctttta cttcccacgaggatcatgacttcttccagcatgtagaaatgcacttaaggtccgagcacc ctcctctctgtggacgagaccatctcagtttccgctcgtactacttcccggtgaagaatg tgatcgatggggacctgtgtgagcagttcaactccatggagccgaacaaacagaagaatg tggccgaagagctggaccggaccccacccgaggtgtctaagaagctggaagacatccgca cacgctatgctttctga

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