Phalacrocorax carbo (great cormorant): 104046398
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Entry
104046398 CDS
T08596
Symbol
EME1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03440
Homologous recombination
pcao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104046398 (EME1)
03460 Fanconi anemia pathway
104046398 (EME1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104046398 (EME1)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104046398 (EME1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
104046398
NCBI-ProteinID:
XP_009504825
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
GGLREPLVSSGEVSCGSQNGMCGAERTIASQSESMHQANKPLLSGASPETSPCPKKLKCS
QKGREANCQAVWQRRKEREERRRQQEQEKERKRALAKMLKAQRPGECQKYITVVLDPVLL
QVEGGGQILSALQAAKYSCVVESQAVPCSITWRRKTVLSQIEEGDEWTEEPNVLVLLRLE
EFLSMVHNYKQEAQGCAEGQGETLQSYVSRVMEKMPGKILALAVAEVENYFRSLRVQSKK
RPQHVAASGNEEEQGKRRKKNTKDSGLKITRMDVEEALVDLQLDKQVQVSFFESWEELGE
FATMFTKAVAEAPFKREQEKTGFPFYLEKGWCGGVKVDRSGKGLLEVWKRQIQQFNRVSL
EMAEAIVSAYPSPQLLTRDQAYSRCSLEQERENMLANILVRRGDGVTATCRRIGPELSRR
IYLQMTSHDPGLYLDFTG
NT seq
1318 nt
NT seq
+upstream
nt +downstream
nt
tggagggctgcgggaacccctggtgtcatctggagaagtgtcttgtggcagccaaaatgg
catgtgcggtgctgagaggactatagcctctcagtctgaatccatgcaccaggctaataa
gcccctgctaagtggagcaagcccagaaacatccccctgtcccaagaagctgaaatgtag
tcagaagggaagggaggcaaactgccaggctgtgtggcagaggaggaaagaacgagaaga
acggaggaggcagcaggagcaggaaaaagagaggaagagggcccttgctaagatgctgaa
agctcagcgaccgggggagtgccagaaatacataacagtggtgctagatccagttctttt
gcaggtagaaggtggtggccagatccttagtgctttgcaggctgcaaagtattcctgtgt
tgttgagagtcaggctgttccctgcagcatcacctggaggagaaaaactgtgttatctca
gatagaagaaggagatgaatggacagaagaaccaaatgtcctggttctgcttcgcttgga
ggagtttttgtccatggttcacaactacaaacaagaggcccagggctgtgcggaaggaca
gggggagaccctacagagctacgtatctcgtgtgatggagaaaatgcctgggaaaattct
ggcgctggcagtagctgaagtagaaaactatttcaggtctctcagagttcagtcaaaaaa
gagacctcaacatgtagcagcgagtggaaatgaagaggaacagggaaaacggagaaaaaa
gaacactaaggactctggcctgaagataaccagaatggatgtggaagaagccttggtgga
tctgcagctggacaaacaagtccaagtcagcttttttgagagctgggaggagcttggaga
atttgccactatgttcacaaaagctgtagctgaagcaccgttcaagcgagagcaagagaa
gacgggcttccctttctacttagagaaggggtggtgtggaggggtgaaggtggatcgttc
cggaaagggtctcttggaagtttggaagaggcagatacaacaattcaaccgggtcagcct
cgagatggctgaggctattgtgtctgcctacccttctcctcagctgctaaccagagacca
ggcctacagcaggtgctccttggagcaggagcgggaaaacatgctggctaacatccttgt
gcgccgtggtgacggtgtgacggccacctgccggcggatcggacccgaactctcgcgccg
aatctatctgcagatgacttcccacgatcctggtctctacttggatttcactggctag
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