Phalacrocorax carbo (great cormorant): 104046584
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Entry
104046584 CDS
T08596
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
pcao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104046584 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104046584 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104046584 (THOC2)
03041 Spliceosome [BR:
pcao03041
]
104046584 (THOC2)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104046584 (THOC2)
Spliceosome [BR:
pcao03041
]
Complex C
Other components
EJC/TREX
104046584 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104046584 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Thoc2
THOC2_N
Motif
Other DBs
NCBI-GeneID:
104046584
NCBI-ProteinID:
XP_009505040
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MKKFVSDRVVKFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGM
FKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKL
SHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHD
DTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEI
TEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRN
GVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPH
DAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPK
VWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERC
TALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAI
DAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVT
RWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHC
LETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSG
QLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTLNTVRLEEGTTEETEK
LKEKSQGVVKVINKAVNATPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKDKTPAA
VPEMKALGKDGKDKPKEERANKDDKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVT
IVESKSTAEKEREKEPSRERDVAKEMKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQ
KRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERS
REREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEK
EKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHK
SSDKHR
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattcgtcagtgacagagtggttaagtttcagtctgatggaagcaaacaagaa
gataaagagaaaatggagatactgtttagctgtttgttgagtattaccgaccaagtcttg
cttccctctctctctctgatggactgcaatgcatgcatgtctgaagaattatgggggatg
ttcaaaacttttccataccagtaccggtaccgtctttatgggcaatggaagaatgaaaca
tacaatagtcacccacttctagtgaaagttaaagctcagaccatagaccgagccaaatat
atcatgaagcgtttaactaaggaaaatgtgaaaccctctggaagacaaattgggaagctc
agccacagcaatcctacaattttatttgattacattttatcacaaatacaaaaatatgat
aacttaataactccggtggttgattcactgaaatacctcacttcgctgaactatgatgtc
ttggcatactgtatcattgaagctctggcaaaccccgagaaagagagaatgaagcatgat
gacacaacaatctcaagctggctgcagagtctggctagcttttgtggtgcagttttccga
aaatacccaattgaacttgctggtctacttcaatatgtagccaaccaactgaaagctggg
aaaagctttgatttgcttattttaaaagaggtagtacagaaaatggcagggatagaaatt
acagaagaaatgacaatggaacaattggaagccatgactggtggagaacaactaaaagct
gagggtggatacttcggccaaatcaggaatacaaaaaaatcttctcagaggttgaaagat
gcattattggaccatgatcttgcccttccactgtgcctgcttatggctcaacagagaaat
ggtgtgatctttcaagagggaggggaaaaacatctgaagctggtgggaaaactgtatgat
cagtgccatgacaccctggtacaatttggtgggtttttagcatccaatctaagcacagag
gattacattaagcgagtgccttctattgatgttctctgtaatgaatttcacacacctcat
gatgctgcatttttcctctcaagacccatgtatgcacaccatatttcatcaaagtatgat
gaactaaaaaaagctgagaagggaaataaacagcagcacaaagttcacaaatacattaca
tcgtgtgagctggtgatggctcctgtccatgatgctgtgatttctctgcaccttcccaag
gtttgggatgacatcagtcctcagttttatgctacgttctggtctttgacaatgtatgac
cttgccgtcccacatagtagctatgacagagaagtcaataaacttaaagtccagatgaaa
gccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaacgttgc
acagctcttcaggacaagctccttgaagaggagaagaagcagttggagcatgtgcagcgg
gttctacagaggctgaaactagagaaggataactggcttctggcaaagtctaccaaaaat
gagactatcacaaagtttttgcagttatgtatatttcctcgatgcattttttcggcaatc
gatgcagtttattgtgctcactttgtagaactggtgcatcagcagaaaacacccaacttt
tccacgcttctctgctatgacagagttttctctgatattatatatacagttgcaagttgc
actgaaaatgaagctagtagatatggcaggttcttatgctgtatgctggagactgtgact
agatggcacagtgacagagtcatatatgaaaaggaatgtggcaactatccaggcttccta
actatattacgggcaactggatttgatggtggaaataaagctgatcaattggattatgag
aatttcagacatgtggtacacaaatggcactataagttaactaaggcttctgtgcactgc
cttgaaacaggtgaatatacacatatcagaaatatcctgattgtgctgaccaaaatcctt
ccgtggtatccaaaagtgctgaacctgggccaagccttggaaagaagagtacataagatc
tgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctattctggg
cagttgaaaagtaggaagcctttcatgatacctgaaaatgaattccatcacaaagaccca
cctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggtgctgggatgcct
acatctctcacactaaatacagtcagactggaagaaggcactactgaggagactgagaaa
ctgaaggagaagtctcagggtgtggtgaaagttattaataaagctgtcaatgctacaccg
aaggtgacaacaagcaatggaaacagtgcttctaatagcaaaattattaaagagaaagat
gataaagaaaaaagtgggaaggaaaaagataaagaaaagaaagacaagactccagctgcc
gttccagagatgaaggcacttgggaaggatgggaaagataaaccaaaggaagaacgggca
aataaagatgataaggcaagagagatcaaggagaaaacaccaaaatctgacaaagagaag
gaaaaagtcaagaaagaagaaaaagcttcaaaagaagaaaagtccaagacggttgttacc
atcgttgagtccaagtcaaccgcagaaaaggagcgagaaaaggagccgtccagagaaaga
gatgtagcgaaggaaatgaaatccaaggaaaatgctaaaggaggagaaaagatgccagta
gctgggtccttgaagtcacctgttccccgatcagaaacatcagaatctgaaagggaacaa
aaacgccgcaaagttgatacacattcttctccatcacattcctcaacagtaaaggacaac
ctcaacgaactcaaggactcttcagcaaagcactacattaaccacactactccaacactg
tccaagagtaaggagagagaagtggacaagaaagatttggacaagtcaagggaaagatcc
agagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagggatcattcaaac
agtgaccgagaggtaccacaggattcaactaaacgacgcaaagaggaaaatgggacaact
ggttcttcaaagcatagcaaaagtgaaagtccttctgattcccctcgcttaaatgaaaag
gagaaagagaagaacaaatcgaaatcttcaggaaaagagaaaggtgattcaattaaagca
gaaaagatggagaagagctcctctggtagcaaaaaggaatccaggcatgataaagaaaaa
acagaaaagaaagaaaaacgagacagtactggagggaaagaagaaaagaaacatcataaa
tcttcagacaagcacagataa
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integrated database retrieval system
