Phalacrocorax carbo (great cormorant): 104046770
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Entry
104046770 CDS
T08596
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104046770 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104046770 (TRIP12)
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104046770 (TRIP12)
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
HECT type E3
104046770 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104046770
NCBI-ProteinID:
XP_009505274
LinkDB
All DBs
Position
Unknown
AA seq
2034 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQQEDPERANTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHSKSKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTDNLSCIKSXXXXXXXXXKLSKLASKSVTSAKAGCSTITDSSSSASTSS
SSSAVASASSSVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTGGSSKFDWAA
RFSPKVSLPKTKLSLPGSSKSESSKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRST
RQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQGAAASS
SVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSK
AQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIM
NHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAIL
QAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKS
VESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLM
CSNCPTLAVQLMKQNIAETLHFLLCGASNGGCQEQIDLVPRSPQELYELTSLICELMPCL
PKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQINEDTGTARAIQR
KPNPLANTNTSGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKC
LRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFS
VYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGTLGTTTTISTGTATAASNAAADLGSP
SLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPK
SSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAH
KFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDVSSFEI
QHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLAL
VHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCAN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSG
NVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKTHTIWY
KPVREDEDGNKDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVYLISAP
PENITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQ
DSRVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALV
SQELQRADLGLWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFR
FLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQ
KKRLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTPVTIHNL
EEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKT
LMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTI
VRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gccgttttaataccacaacaagaagatccagagagagccaatacttcagaaaaacaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagtaaaacgcagtgctagtccagat
tataggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatagtaaatctaagagaagacacttagaccaagaa
cagccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagttcccgaagtcagaaaagaaaaaggacagacaatctgtcttgtataaagagt
nnnnnnnnnnnnnnnnnnnnnnnnncaaaactctccaagctggcttcaaaatcggtgacc
tcagccaaagctgggtgtagcaccatcactgattcttcttcttcagcttccacatcctcc
tcctcttctgctgttgcctctgcttcttctagtgttcctcagggtgccagagtgaaacag
ggaaaggaccagaataaggccagacgttcccgttctgcatccagccccagtccaagaagg
agtagcagggacaaagaaccgagtaaaacaggtggctcttcaaagtttgactgggctgct
cgatttagcccgaaagtcagtctccctaaaacaaaactgtctctaccaggctcttccaag
tcagagtcatcaaaacctggaccttccggactacaggctaagctcgcaagtctaagaaaa
tctacgaagaagcgcagtgaatcaccacctgctgagctccccagtttgcggcggagcaca
cggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggctctggcctgggcaaa
agaggggcagctgaagctcgccgacaggagaagatggctgatcccgacaacaaccaggat
ggagttaactcttcagctgcacgtacggatgaggctccccagggagctgcagcttctagt
tctgttgctggggctgtaggtatgacaacctctggagaaagtgagtcagatgattctgag
atgggaagactacaagctctattagaggctaggggtcttcctcctcacctgtttggccct
cttggtcctcggatgtcgcagctcttccacaggacaattggaagtggagctagttctaaa
gcccaacagcttttacaaggtctccaagccactgatgaaagtcagcaactacaggcagtg
attgagatgtgccagctgttggtcatgggaaatgaagaaacattaggaggatttccagtc
aaaagtgtcgtaccagctttgataacactgctgcagatggagcacaactttgacattatg
aaccatgcatgtcgggccttaacatatatgatggaagcacttcccagatcatctgctgta
gtagtagatgcaattcctgtcttcttggaaaagctgcaagttattcagtgcattgatgtg
gcagagcaggcgcttacagccctggagatgttatcacgcaggcatagtaaagccattctg
caggcaggtgggttggcagactgtttgctgtatctggaattcttcagtataaatgcacag
aggaatgccctagctattgctgccaactgctgccagagcataacacctgatgagtttcac
tttgtggcagactctttgccactgcttacacaaaggttaacccatcaggacaaaaagtct
gttgaaagcacttgtctctgttttgcacggctagtggacaacttccagcatgaggagaac
ttgctccagcaggttgcttccaaggacttgttaacaaatatccagcaactcttggtagtg
acacctccgatcctgagctcaggaatgttcatcatggtggtgcgcatgttttccttaatg
tgctccaattgtccgacacttgcagtccaacttatgaagcaaaatattgcagaaacactt
catttcctcctttgtggagcctcaaatgggggttgtcaagaacaaattgaccttgttcca
cgaagtcctcaagaactttatgagcttacttctcttatctgtgaactgatgccttgcctg
ccaaaagagggaatctttgctgttgatacaatgctgaagaaaggaaatgcacaaaataca
gatggtgcaatatggcaatggcgagatgacaggggtctctggcatccctataacagaatt
gatagtcgaataatagagcaaataaatgaggatactggaacagcacgtgccattcagcga
aaaccaaaccctttagccaatacgaacactagtggacattcggaattgaagaaggatgat
gctcgagcacaactaatgaaagaggacccagaactggcaaaatcctttatcaaaacatta
tttggtgttctttatgaagtatatagttcttcagctggacctgctgttagacacaagtgc
cttagagcaattcttaggataatttatttcgctgatgctgaacttctgaaggatgtactg
aaaaaccatgctgtttcaagtcatatcgcctccatgctgtcaagtcaagaccttaagata
gtagttggagccctgcagatggcagagattttaatgcaaaagttacctgacatttttagt
gtttacttcagaagagaaggtgtgatgcaccaagtgaaaaacttagcagagtctgaggct
ttgctaacaagcccaccgaaagtatgcactaatggatcaggaacgctgggtaccactaca
acaataagtactggaacagccactgctgctagtaatgcggctgctgatttgggctctcct
agcttacaacacagccgggaggattctttggatctgagcccacagggacgactgagcgat
gttctgaagaggaaaagactgccaaaacgagggccgaggagaccaaaatactctcctcca
agagatgatgacaaagtagacaatcaagctaaaagccctacaactactcaatctcctaaa
tcttccttcttggcaagtttaaatccgaaaacatggggaagattaagcacacagtccaac
agtaataatattgaaccagcacgaacagcaggagtaagtggtcttgcaagggctgcttcc
aaggatactatttcaaataacagagaaaaaattaagggctggattaaggagcaagcccat
aaatttgtagaacgttattttagttctgaaaacatggatggaagcaatcctgcactaaac
gtgttacagagactttgcactgcaactgaacaactcaacctccaggtggatggtggaaca
gagtgccttgtagaaatccgtagcattgtctcggagtctgacgtctcctcctttgaaatc
cagcatagtgggtttgttaaacaactgctgctttatttgacatctaaaagtgagaaagat
gctgtaagcagggatatcagattgaaaagatttcttcatgtatttttttcttctccactt
cctggagaagaaccccttggaagactagagccattagaaaatgcacctttgctggcatta
gtccataaaatgaacaattgcctcagtcagatggaacagtttcctgtcaaagtgcatgac
ttccctagtggaaatggaacagggagcagtttttctcttaacagaggatcccaagcttta
aaattcttcaatacacatcaattaaaatgccaactgcaaagacatccagactgcgctaat
gtgaaacagtggaaaggtggacctgtgaagattgatcccctggctttggtacaagccatt
gaaagataccttgtagttagaggctatggaagagttagagaagatgatgaggatagtgat
gatgatgggtcagatgaagaaatagatgaatctttggctgctcagttcttaaattcaggg
aatgtgagacatagactgcaattttacattggagatcacttgctgccatacaatatgact
gtgtatcaagctgtgaggcagtacagtttgcaggctgaggaggagagggagtctacagat
gatgaaagcaacccattaggaagagctggtatttggacaaaaacacataccatttggtac
aaacctgtgcgagaggatgaagatggtaataaggactgtgttggtggtaaaagaggaagg
gcacaaactgctcccacaaaaacctcccctagaaattctaaaaagcatgatgaattgtgg
catgatggtgtatgcccgtcggtattaaatcctttagaagtttacctcatatctgctcca
cctgaaaacataacatttgaagatccttcattagatgttattcttcttttgagagtttta
catgccatcagtcgatactggtattacttgtatgataatgcaatctgcaaggagataatt
ccaacctcagagtttatcaacagtaaactgacagcaaaagcaaacaggcagcttcaggat
cctttggtaattatgacaggaaacataccaacttggctgacagaacttggaaaaacatgc
ccgtttttctttccatttgatacccgtcaaatgctgttttatgtaactgcttttgatcgt
gatcgagccatgcaaagactactggatactaatccagaaatcaatcaatcggattctcag
gatagcagagtggcaccacgactggacaggaaaaaacgcactgtgaacagagatgagctg
ttgaaacaggcagaatctgtgatgcaggatctaggaagttcaagagccatgttggaaatc
cagtatgagaatgaagttggcacaggcctaggccccacgctagagttctatgcacttgta
tctcaggaactacagagagcagacttaggcctttggaggggagaagaagtgactttagcc
aatccaaaaggaagccaggaaggcaccaagtacatccataaccttcaaggcctttttgca
cttccttttggtagaacagccaagccagctcacatcgctaaagttaaaatgaagttccgc
tttctgggaaaactaatggccaaggcaatcatggattttagactggtggaccttcctctt
ggacttcctttttataaatggatgctacgacaagaaacttccttgacgtcacatgacttg
ttcagtattgatccagtagtagccaaatcaatatatcaccttgaagatattgtcagacaa
aagaaaagacttgaacaggacaaaacacagaccaaagaaagtctacagtatgcattggag
gctctgactatgaatggctgctcggtggaagatctagggctggacttcactcttcctggg
tttcctaatatagaactgaaaaaaggcgggaaagatacaccagtcaccatccacaattta
gaggagtatctcagattggttatattctgggcactaaatgaaggtgttgccagacagttt
gactcattcagagatggatttgaatcagtcttccctctcagtcaccttcagtacttctat
cctgaggagttggaacagctcttgtgcggcagcaaaacggacacttgggatgcaaagact
ttaatggaatgttgcaggccagatcatggttatacacatgacagtcgagcagtgaagtat
ctctttgaaattctcagtagctttgatagcgagcagcaaagactgtttcttcagtttgtg
acgggtagccctagactgcctgtaggaggctttcgaagtttgaatcctccattgacaatt
gtacgcaagacatttgagtctacagagaatccagatgatttcttgccctcagtaatgact
tgtgtgaactatctcaaattgccggactattcaactattgagataatgcgtgaaaaactc
ttgatagctgcaagagaagggcagcagtcattccatctttcctga
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integrated database retrieval system
