Phalacrocorax carbo (great cormorant): 104046867
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Entry
104046867 CDS
T08596
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104046867 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104046867 (RAG1)
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104046867 (RAG1)
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104046867 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-C2H2_ATbp_3rd
Cpxcr1_C
TasA_anchor
Motif
Other DBs
NCBI-GeneID:
104046867
NCBI-ProteinID:
XP_009505398
UniProt:
A0A093QUR9
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MSVASQMDLPEEIQHPYTKFSEWKFKLFKVRPFEKTPSDDTQHINKDHAEEVTSSDKEII
LCNDKAVPRGEKMDLMGNRQALKKDANDLKTQDNKAHQNNLKQLCRICGVSFKTDCNKRT
HPVHGPVDDETLWLLRKKEKKATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWSIIHRK
FSNTPCEVYFPRNSTMEWQPHSPNCDVCHTTSRGAKRKSQPPPSVQHGKRVKVIAERARV
NRGVKNQAQINNKNLMKEIVNCKNIHLSTKLLAVDYPADFVKSISCQICEHILADPVETT
CKHLFCRTCILKCIKVMGSYCPSCWYPCFPTDLVTPVKSFLNILDSLGIRCPIKECDEEI
LHGKYGQHLSSHKEMKDRELYSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKE
EGGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYH
KMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLP
LSIDDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKAKNLDDYLNGPFTVVVKESCDGM
GDVSEKHGSGPAVPEKAVRFSFTVMNIAISHGNESKRIFEEVKPNSELCCKPLCLMLADE
SDHETLTAILSPLIAEREAMKNSELLLEMGGILRTFKFIFRGTGYDEKLVREVEGLEASG
STYICTLCDATRLEASQNLVFHSITRNHAENLERYEIWRSNPYHESVDELRDRVKGVSAK
PFIETVPSIDALHCDIGNAAEFYRIFQMEIGEVYKNPDVSKEERKRWQLALDKHLRKKMN
LKPMMRMSGNFARKLMSKETVEAVCELIKCEERHEALKELMELYLKMKPVWRSSCPAKEC
PELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNE
SGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTIDPEDSL
GDSLPLEVLEGNDSAEL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagcatcacagatggacctgcccgaagaaattcagcatccatatacaaaattt
tctgaatggaaattcaagctgtttaaagtgagaccatttgaaaaaacaccttctgatgac
acccagcacataaacaaagatcatgcagaagaggtcacttcttcagacaaagaaatcatc
ctgtgtaatgataaagcagtgccaagaggagaaaagatggacttaatgggcaatagacag
gcacttaagaaagatgccaatgacttgaaaacacaagacaataaagctcatcagaacaat
ctgaagcaactttgccgcatctgtggagtttcatttaaaactgattgtaacaaaagaact
catccagtgcatgggccagtagatgatgaaactctgtggcttctgagaaagaaagagaaa
aaagcaacctcttggccagatcttatcgctaaggtttttaagattgatgtgcgaggggat
gttgatactatccaccccacacgattttgtcacaactgctggagtattatccatagaaaa
ttcagtaatactccatgtgaagtatattttcctaggaacagcacgatggagtggcaaccc
cattccccaaactgtgatgtgtgccacactaccagtcggggagccaagagaaaaagccag
ccaccacccagtgtacaacacgggaaacgtgtgaaggtcattgcagaacgtgctcgagta
aacagaggtgtaaagaaccaagcacagataaacaacaaaaatttaatgaaagagattgtc
aattgcaagaatatacatctcagcaccaagctgcttgcagttgattacccagcagatttc
gttaaatccatctcttgccagatctgtgagcatattttggcagatccagtggaaacaaca
tgtaaacacttattttgcagaacttgcatccttaaatgtatcaaggttatgggcagctat
tgcccttcctgctggtatccttgcttccctactgatctggtcaccccagtgaaatccttc
ctgaacatccttgatagcctgggtataaggtgccctataaaggaatgtgatgaagagatc
ttgcatggaaaatatggccaacacctctccagccacaaggagatgaaagatagggagctc
tacagctacataaataaaggcggccgaccaaggcagcatctcctgtctttgaccaggaga
gctcagaaacatcgtctgagggagctgaaacgtcaggtcaaggcttttgctgagaaagaa
gagggtggcgatatcaaggctgtatgcatgacactgttcctactagctttaagagcaaaa
aatgaacacaaacaagcagatgaattggaggctataatgcaaggaaggggatctggactt
caccctgctgtctgcctggcaatccgagtcaacacatttcttagctgtagccaatatcat
aaaatgtacagaacggtaaaagctgtcactgggaggcagatcttccagcctttacatgct
cttcgcactgctgagaaagccctcctgccaggttaccatccattcgagtggaaacctccc
ttgaaaaatgtatccactaacacagaagtgggaattatagatggactatcaggattgcca
ctctcaattgatgactacccagtagatacaattgcaaagagatttcgatatgatgcagct
ttggtttgtgccttaaaggacatggaggaggagatcttggaaggcatgaaagcaaaaaac
ctggatgactatttgaatggtcccttcactgtggtagtaaaagagtcctgtgatggaatg
ggagatgtcagtgagaagcatggaagcgggcctgctgtcccagagaaggctgttcgcttt
tctttcacagtcatgaatatcgctatatcacatgggaatgaaagcaagaggatctttgaa
gaagtcaagcccaattcagagttgtgttgcaagcccctgtgccttatgctggctgatgaa
tcggatcatgaaactctgacagcaatcctgagccccctcatagcagaaagagaggctatg
aaaaacagtgaactgctacttgaaatgggaggcatcctgagaacattcaaattcatcttt
aggggtacaggatatgatgagaaactcgtgcgtgaagtggaagggctggaggcctcaggt
tccacttacatttgtacgctctgtgacgcaacccgcttggaagcatcccagaatttggtc
ttccactcaataaccaggaaccatgctgaaaatctggagcgatatgaaatatggaggtcc
aacccatatcatgaatctgttgatgagctccgtgacagagtgaagggtgtttcagccaaa
ccttttattgagaccgttccctccatagatgcgttgcactgcgacattggcaatgcagca
gaattttataggattttccagatggagattggtgaagtttataagaatcctgatgtgtct
aaagaggagaggaagaggtggcagttggctcttgataaacacctcaggaagaagatgaac
ttgaagcctatgatgaggatgagtggaaattttgctagaaagctcatgtccaaggagacc
gtagaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagccctaaaagaacta
atggagctttatctgaagatgaagccagtgtggcgatcttcctgtcctgccaaggagtgt
ccagaactgctctgccagtatagctacaattcacagcgttttgctgagctcctatcaaca
aagttcaagtacagatatgaaggcaagattacaaattatttccacaaaacccttgctcat
gttcctgaaatcattgaaagagatgggtccattggggcctgggcaagtgaaggaaatgag
tctggaaacaaactgttcaggaggttccgaaaaatgaatgccaggcagtccaaatgctat
gagatggaggatgtcttgaagcatcactggctatatacctctaagtacctccagaagttc
atgaatgctcataaaacattaaaaagccagggcttcaccattgatccagaggatagttta
ggtgactccttgccactggaggtcttggaaggcaatgattcagcggaactctaa
DBGET
integrated database retrieval system
