KEGG   Phalacrocorax carbo (great cormorant): 104046929
Entry
104046929         CDS       T08596                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
pcao  Phalacrocorax carbo (great cormorant)
Pathway
pcao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104046929 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcao03019]
    104046929 (EXOSC1)
Messenger RNA biogenesis [BR:pcao03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104046929 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104046929 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1
Other DBs
NCBI-GeneID: 104046929
NCBI-ProteinID: XP_009505464
LinkDB
Position
Unknown
AA seq 113 aa
CSINSRFAKVHILYVGSTPLKSAFRGTIRREDIRXXXXXQVEVYKSFRPGDIVLAKVISL
GDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTKDLREGARG
NT seq 342 nt   +upstreamnt  +downstreamnt
tgcagcattaactcccgcttcgccaaggtgcacatcctgtacgttggctccacaccgctg
aagtctgccttccgggggaccatacggagagaagatattcgnnnnnnnnnnnnnntgcag
gtagaggtgtacaagagtttccgccccggtgatatagtcctggctaaagtcatctcgctg
ggggacgcgcagtccaactacctgctgagcacagcggagaatgagctgggcgtggtggtg
gcgcgcagcgaggcaggggtgcagatggtgcccatcagctggtgtgagatgcagtgccca
cggacccacaccaaggacttacgggagggggcccggggatga

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