Phalacrocorax carbo (great cormorant): 104046929
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Entry
104046929 CDS
T08596
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104046929 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104046929 (EXOSC1)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104046929 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104046929 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
104046929
NCBI-ProteinID:
XP_009505464
LinkDB
All DBs
Position
Unknown
AA seq
113 aa
AA seq
DB search
CSINSRFAKVHILYVGSTPLKSAFRGTIRREDIRXXXXXQVEVYKSFRPGDIVLAKVISL
GDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTKDLREGARG
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
tgcagcattaactcccgcttcgccaaggtgcacatcctgtacgttggctccacaccgctg
aagtctgccttccgggggaccatacggagagaagatattcgnnnnnnnnnnnnnntgcag
gtagaggtgtacaagagtttccgccccggtgatatagtcctggctaaagtcatctcgctg
ggggacgcgcagtccaactacctgctgagcacagcggagaatgagctgggcgtggtggtg
gcgcgcagcgaggcaggggtgcagatggtgcccatcagctggtgtgagatgcagtgccca
cggacccacaccaaggacttacgggagggggcccggggatga
DBGET
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