Phalacrocorax carbo (great cormorant): 104047040
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Entry
104047040 CDS
T08596
Symbol
HIF1A
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04137
Mitophagy - animal
pcao04140
Autophagy - animal
pcao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104047040 (HIF1A)
04137 Mitophagy - animal
104047040 (HIF1A)
04148 Efferocytosis
104047040 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104047040 (HIF1A)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104047040 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
104047040
NCBI-ProteinID:
XP_009505584
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MALGLERQQSSSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLT
ISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLT
QFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVN
IKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFL
SRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTG
QYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKP
VESPDTKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNGGXSDEQ
QCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTE
PLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAID
TEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATVTIFQQTQ
TPSSTADEIKPVTERVDDVKTLMVPSSPVHIISETSSAPASPYSGNRSRTASPIRAGKGT
LDQTEKSCPGVPSLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGS
LFQPTGDRGGNASLAWKRVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQLT
SYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggctagagaggcagcagtcaagctcggaacgcagaaaggagaagtcaaga
gatgcagcccggtgccgaaggagcaaggaatcagaagtgttctatgagcttgctcatcag
ctgcccctgccccacaccgtgagcgcacacctggacaaggcatccattatgagactgacc
atcagctacttgcgcatgagaaaactgctagatgctggtgagctggagacagaagccaaa
atggagaaggaactgaactgcttctacttaaaagctcttgatggatttgtcatggttctg
tccgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatgggactcact
cagtttgagttgacggggcacagtgtatttgacttcactcatccatgtgaccatgaagag
ctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagagcaaaacacg
gagcgcagcttttttctcagaatgaagtgtacgctgactagcaggggaagaacagtgaat
ataaagtctgctacgtggaaggtactgcactgcactggacacatccgtgtatacgacaca
tgcggtaatcaaacacactgtggctacaaaaagcctcccatgacgtgtctggtgttgatc
tgtgaacctattcctcatccatcaaacattgaggtccccttggacagtaaaacgttcctc
agtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattacagagttgatg
gggtatgagcccgaggaactcctaggtcgctcgatctatgaatactatcatgcgctggat
tctgatcacctgaccaaaacacaccacgacatgttcacaaaagggcaggtgacaacagga
cagtacagaatgcttgctaaacaaggtggctatgtctgggttgaaactcaagcaactgtt
atatacaacactaagaattctcagccgcagtgcatagtgtgcgtaaactacgtgttgagt
ggaattgtccagaaggatttgattttttcccttggacaaactgagtgtatgctgaaacca
gtggagtctcctgatacgaaaatgaccaaaatattcagcaaagatgacctggatgacacc
aacagcctttttgaaaaacttaaacaagaaccagatgctttaactgtgctggccccagct
gctggagacacaattatctctctagatttcagcagtaatggtgggtagtctgatgaacaa
caatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaattg
cagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccacttcgt
agcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacacagag
ccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttctgat
gcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgatgtg
gataacgatatggctaatgaattcaaactggaactcgtggagaaactctttgcaatagat
acagaggcaaaaaatccgttctctactcaggaaactgatttagatttggagatgttggct
ccttacatcccaatggatgatgacttccagttgcgttcctttgatcagctatctccactg
gaaagcagttcatccggctctcaaaatgctgccaccgttaccatatttcagcagactcag
acaccatcaagtactgctgatgaaataaaaccagtaacagaacgtgtggatgacgtgaag
acgctaatggttccttcatctccggtccacataatcagtgaaacgagtagtgccccagcg
tcaccttacagtggcaacaggagtcgaactgcatctccgatcagagcaggaaaaggaaca
ttggatcagacggaaaaatcttgtccaggagtgcccagcttgctaacagtcactctgaat
aaaagatctactgcaatggatgaagaactaaatccaaagatgctagctttgcataatgct
cagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattgggtct
ttattccagccgacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgtgaag
ggatgcaaaacaaatggtcataatggagtggagcaaaagacaatcattctactatcaact
gacatagcaagtaaacttctagggcagtcgatggatgaaagtggactgccccaactcacg
agttacgattgcgaagtaaatgctcccatacaaggcaacagaaacctgctacagggtgaa
gaactgctcagagctctggatcaagttaactga
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