Phalacrocorax carbo (great cormorant): 104047157
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Entry
104047157 CDS
T08596
Name
(RefSeq) uncharacterized protein LOC104047157
KO
K14416
elongation factor 1 alpha-like protein
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104047157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104047157
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104047157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBS1_N
GIP1_N
Motif
Other DBs
NCBI-GeneID:
104047157
NCBI-ProteinID:
XP_009505716
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
FEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAEPLEEEYGYEGTDDTAEYFTSNH
QLTEVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKALDLVLSQGSKQNVKTR
NEDAVIVGKTTKEMCIDTDSSSCAVENVADNTNKAGFGNLTAKSGSACYSLITNDKMLLN
AEKSNRPTSERKGLKSSSLVLSSSFSDDLGKGSFCEPVNKQAENQLPEGSNAVSSIPGSE
DAYFSIGSNPSGNSYYKKLECKEIQDLKSLVIQNVVCDSLSPEDSIPLVSSNTSDCKSNA
NFYSPPCLTSALGKLALDNKVSHTVSRKNELLENFSSLVQSRKQQSPSSDMAALPVLRSG
STSLADLLQEHQESSASHCYSLADLYTQSTASLTNKKLGTSPLSQLVSQPQTSCGMPELT
GSLSSLALSKAPPLKEVENLSLSDLIAETIEVDKTQQTTDFPMLNVAELRPPKRTNIDLS
VLVKNADVSAEQNVVGQSNILSAETKLLKEKQGKCSSSAKTNKKLKKGLTPKRQDLSLSW
MKALRARPSAFALTLCLRYPPKGYKRRTVGMHKAFLYSRQVQDVKPKETGPLIAITPFDF
KSASPDDIVKANQKRAFTRE
NT seq
1865 nt
NT seq
+upstream
nt +downstream
nt
attttgaagatgatgatgtgtatggccaatcagtagaagatgattattgcatttctcctt
caacagcagctcagtttatctactccagacgagacaaaccagcaacatgtgctgagccat
tagaagaagaatatggctatgaaggtacagatgatactgctgaatattttacatccaatc
atcagttgactgaagttgatagagcccgtcttaattcatgccttgatcaaatgagagaag
ttttggcagagtctgtaccagagcaaacaatggtgcaagcagtactggatagtaaatttg
atgtacagaaggctttggatcttgtgctttcacaaggcagtaagcaaaatgtgaagacca
ggaatgaggatgctgtgattgtaggaaagacgacaaaagaaatgtgtattgatacagaca
gtagctcttgtgcagtagaaaatgttgctgacaacaccaacaaagctgggtttggaaact
tgacagctaaaagtggttcagcttgttactctttaattacaaatgacaaaatgctcctta
atgctgaaaaatccaatagacctacatctgaaaggaaaggattgaaatcctcttcgcttg
ttctgtcatcttctttcagtgatgatttgggtaaaggatcgttttgtgaacctgtcaata
aacaggcagagaatcaactaccagaaggttctaatgcagtaagttcaattcctggcagtg
aagatgcttactttagcataggaagtaacccatctggaaattcttactataagaagttgg
aatgcaaagaaatacaggacttgaaatccttggtgattcagaatgtggtttgtgattctc
tgagtcctgaagacagcattcctcttgtttcctcaaatacttctgattgtaaaagtaatg
caaatttttacagccctccgtgtttaacaagtgctttaggaaaactagctcttgataaca
aagtcagtcatactgtaagtagaaagaatgaacttcttgaaaatttttcttcacttgtgc
aaagtagaaaacagcaaagcccctcttcagacatggctgctttgccagtgttaaggtctg
gaagtacatcgttggctgacttacttcaggagcaccaggaaagcagtgctagccactgtt
attctctggctgatctttatacccagtcaacagcaagtctcactaataagaaattgggaa
cctcaccattatcacaactagtaagtcaaccccaaacttcctgtgggatgccagaactaa
caggatctttgtcctctctagccctgtctaaagctcctccactaaaggaagttgagaatt
tatcactctcggatctaatagcagagactattgaagtagataaaactcaacaaacgacag
acttccccatgctcaatgtagctgaattgaggccccctaaaagaaccaacattgatttaa
gtgtccttgtaaaaaatgcagatgtatctgcagaacaaaatgtggtaggacagtcaaata
tcttaagtgctgaaactaaacttttaaaagaaaaacaaggaaaatgttctagttctgcca
aaacaaataaaaaactcaaaaaaggacttactcctaagaggcaggatttgtccctttcat
ggatgaaggcgctgcgtgcaagaccttcagcttttgctttaactttatgtctccgttatc
ctccaaaaggttataagcggcgcacagttggtatgcataaagctttcctatacagtagac
aagtacaagatgtaaaacccaaggaaactggtccgctaatagccataacaccatttgact
tcaaatcagcatctcctgatgatattgtgaaagctaaccaaaaaagagcttttacaagag
agtag
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