Phalacrocorax carbo (great cormorant): 104047292
Help
Entry
104047292 CDS
T08596
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104047292 (CHD7)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104047292 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
DUF4812
Motif
Other DBs
NCBI-GeneID:
104047292
NCBI-ProteinID:
XP_009505877
LinkDB
All DBs
Position
Unknown
AA seq
2349 aa
AA seq
DB search
MLVNMNKLKAGVLLRSYKAGDYEGKTNSRQHPGNKKPDSETSAAKKKVNKGKEGSENSDL
EKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTS
QSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEVEEFYVKYKNFSYLHCQWASVEELD
KDKRIHQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDNGEPVTHYLVK
WCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEIERVERPPADDWKKSESSREYKNNNK
LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLST
IPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMI
LTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSL
LHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIE
VELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILE
EFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLI
QRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSD
WNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREN
ATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGS
TFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSA
VKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSH
GRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVNHSGLSA
PVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKVLLRVRMLYY
LRQEVIGDQADKILEGADSSEVDIWIPEPFHAEVPADWWDKEADKSLLIGVFKHGYEKYN
SMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRTPFKDE
IDEFANSPPEDKEESIEIHPNKHSESNAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQ
MRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVSTFGIIFDPV
KHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDLSTMIEPITE
ERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKDLLVGAAKHG
VSRTDYHILNDPELSFLEAHKNFAQNRGTGNANTVSSANPLGAGCSQTPPIVASTPVQEE
KITEQTESKVEGSENPAAKEKPDIKEETDTADKDTKPDCDAEAEPGSVKCELKDIEMSTD
VDPKSISEKGSEEDEEEKLDDDDKSEESSQPEVNAWRAGAASQGKNFDEESNASMSTARD
ETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPTAVDSPLQKRSFAELSMVGQASVSGSEDITASPQLSKEDALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSV
TSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRKNVEG
LDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFD
RLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTSLQNL
QNLQSLQLAGLMGFPPGLATAAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLNNPI
TATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAATAA
TTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSVFLPPGLGGLTLPGFPALAGLQ
NAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLDGGE
EIENNENDE
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaatatgaacaagcttaaagctggtgttttgttgagaagttacaaggctggg
gattatgaaggaaaaacgaactccaggcagcatcctggtaacaagaaaccagattcagaa
actagtgctgcaaagaaaaaggttaacaagggaaaggaaggttctgaaaactcagatttg
gaaaaaactccgccaccatcacctcatcctgaagatgaagatgacccaggtgttcagaag
cgacgctccagcaggcaggtgaagaggaagcgttatacagaagacctggagttcaagatt
tcagacgaggaggctgatgatgctgatgctgctggaagagactccccttcaaatacttct
cagtcagagcagcaggaatctgctgatgctgaaggtcctgttgtggagaaaatcatgagc
agccgttcagtcaagaaaaagatggagaatggagaggaggtagaagtagaggaattctat
gtaaagtacaaaaacttttcttaccttcattgtcagtgggcatctgtggaagagctggac
aaagacaagagaattcaccagaagattaagcggtttaaggcaaaacagggccagaacaaa
ttcctttcagaaattgatgatgagctttttaatccagattatgtggaagttgatcgaatc
atggatttttcacgtagcacagatgataatggagagcctgtaacgcattatctggtgaaa
tggtgttcgcttccttatgaagacagcacttgggagctcaagcaagacatcgaccaagct
aagattgaagaatttgagaaactgatgtctagggagccagaaatagagcgtgtggagcga
cctcctgccgatgactggaagaaatcggagagttccagggagtataaaaacaataacaaa
ctcagggaataccagttggagggagtaaactggcttcttttcaattggtacaacacacga
aactgcattttagcagatgaaatggggttgggaaagactatccagtccattacgtttctc
tatgagatatatttgaaaggaatccatggtcctttcttggttattgcaccattgtccaca
attcccaactgggaaagggagttccgcacctggacagagttgaatgtggttgtgtatcat
gggagtcaagcaagccggcggaccattcagttgtatgaaatgtatttcaaagatccacag
ggtcgagtgataaaggggtcctacaagttccatgccattatcacaacgtttgaaatgatc
ttgactgattgcccggagctgcgtaacattccatggcgttgcgtggtcatcgatgaggcc
cacaggctgaaaaacaggaactgtaagcttctggaaggcctcaagatgatggacctggaa
cataaagtgctgcttactggaacccctttgcaaaatacagtagaagagctatttagcttg
cttcacttcttggaaccaggtcgcttcccatcagaaaccacattcatgcaagaatttggt
gatctgaaaactgaggaacaggtgcaaaaacttcaagctattttgaagccgatgatgctg
agacgtctcaaggaagatgtagaaaagaacctggcccccaaagaggaaaccatcattgaa
gttgagctgacaaatattcagaagaaatactatcgtgctattcttgaaaagaatttcaca
tttctttccaagggtggaggccaggcaaatgtacctaaccttttaaacactatgatggaa
ctaagaaaatgctgcaatcatccgtaccttattaatggtgctgaagagaaaattttggaa
gagtttaaagaaacacacaatgccgactctccagattttcagctccaggcaatgatccag
gctgctggcaagctagtactgattgacaagctgctgccaaaactgaaggctggtggccac
agggtgcttatcttttcccagatggtgcgctgcttggacatactggaagactacctcatt
caaagacggtacccatatgaacgaattgatggccgagtaagaggcaacttgcgtcaggca
gctattgacaggttttcaagacctgattctgataggtttgttttcctgctgtgtacaaga
gcaggaggtttgggcattaatcttactgctgctgatacctgcatcatttttgattcagac
tggaacccccaaaatgacctccaggctcaagcacgatgtcacagaataggacagagcaaa
tcagtgaaaatttacaggttgataacaaggaattcttatgaaagggaaatgtttgacaaa
gctagcttgaagcttggccttgataaggctgtgctacaatctatgagtggaagagaaaac
gccacaaatggggtgcaacagctttctaagaaagaaatagaagatcttcttcgaaagggg
gcatatggtgctctgatggatgaggaagatgaagggtctaagttttgtgaagaggatatt
gatcagattctcttaaggcgaacacacacaattactattgaatctgaaggaaaaggctca
acatttgcaaaggctagttttgttgcatctgggaacaggacagacatttccttggatgac
ccgaatttttggcagaagtgggcaaagaaagctgagctggatattgatgcgttaaatgga
aggaataacttagttattgatacaccaagagtaaggaagcaaaccagactctacagtgca
gtcaaagaggatgaactgatggagttttcagacctggaaagtgattctgaagaaaaacct
agcacaaagccccgcaggcctcaggacaaatcacagggttatgcaagaagtgaatgtttc
agggtcgagaagaacttgttggtttatggctggggtcggtggactgacatcctctcacat
ggacgctataaacgtcagctaacagaacaagatgtggaaaccatctgccggactatcctg
gtatattgtcttaatcattacaaaggggatgaaaatatcaaaagtttcatctgggatctg
atcactccaactgcagatgggcaaactcgagctttggttaatcattccggtctgtctgca
ccagtgcccagagggaggaaaggcaagaaagtaaaagcccagagttcacagccaatgctg
caagatgcagattggctcacaacctgtaatccagatgtattatttcaagaagacagctat
aggaaacatctcaaacaccactgtaataaggtcctgctgcgtgtccgcatgctctactat
ctacgacaagaagttataggggaccaagcagacaagatcttagagggtgctgactcaagt
gaagtagatatatggatacctgagccattccatgccgaagttcctgcagactggtgggat
aaggaggcggataaatcccttttaattggagtattcaaacacggttatgagaagtacaat
tctatgagagctgatccagcactctgctttctggaacgggttggcatgcctgatgcgaag
gccatagctgctgaacagagagggacagacatgttagcagatggcggtgatggcggtgaa
tttgacagagaggatgaagatccagaatataagccaaccagaactcctttcaaggatgaa
attgatgaatttgcaaactcacctccagaagacaaagaggagtccatagaaatacaccca
aacaagcacagtgaaagcaatgctgagttaggccagctctactggcccaacacttcaacc
ctgactacccgtctgcgtcgcctcattactgcctatcagcgcagctataaaaggcaacaa
atgaggcaagaggcactaatgaagactgaccgcaggagacgtcggcctcgggaagaagtg
agggcactagaagcagaaagggaagctataataactgaaaaacgacaaaagtggacaaga
agagaagaagctgacttttatcgtgtggtgtctacttttggaattatttttgatcctgta
aaacatcaatttgactggaatcaattcagagcatttgccaggcttgataaaaagtccgac
gaaagcttggaaaagtattttaatggctttgtgaatatgtgtagacgagtgtgccgaatg
ccagtcaaaccggatgacgaaccgcctgatctttccactatgattgagccgatcacagaa
gagcgtgcttctagaactttatatcgcatagaactgttgaggaaaatccgtgaacaggtt
ctccatcacccgcagttgggggagaggctaaaactttgccaaccaagcttggacctgcca
gagtggtgggagtgtggtaaacatgacaaagacttactggttggtgctgctaaacatggc
gtcagtaggacagattatcacattctgaatgatcctgaactctcttttcttgaggctcac
aaaaacttcgctcaaaacagagggacgggtaatgcaaatactgtctcttctgcaaaccct
ctgggtgctggctgcagtcaaacaccacctattgttgcatccacaccagtacaagaagaa
aaaattacagaacaaacagagtctaaagttgaagggtctgaaaatccagcagccaaagag
aagcctgatatcaaagaggagacagatactgcagataaggacactaaaccggactgtgat
gctgaggctgagcctggctctgttaaatgtgaattgaaagacatagaaatgagtacagat
gtagacccaaaatctatttctgagaaaggttcagaagaagatgaagaggagaaactggat
gatgatgataaatcagaagaatcctcccaacctgaagttaatgcctggagggcaggagca
gcttctcagggtaagaattttgatgaagaaagcaatgcctctatgagtaccgcaagggat
gaaacacgtgatggattctacatggaagatggggatccctctgtggtacagctgcttcat
gagagaacatttgccttctctttctggcctaaggacagagtaatgatcaaccgattagac
aacatctgtgaagcagtgctgaaagggaagtggccggtaaataggcgccagatgtttgat
ttccaggggctcatacctgggtatactccaacagctgtggacagccctctgcaaaaaagg
agctttgcagagctctccatggttggtcaagccagcgtcagtggcagtgaagacatcact
gcttctcctcagctatcaaaggaagatgcactcaacttatcggtcccacgtcagaggagg
aggaggagaagaaagattgaaattgaggctgagagagctgccaagaggagaaatcttatg
gaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatggacaagaaaaggtt
gtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaatttttcatctgtt
acttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgcctttaaaactcaa
atggagctgctgcaagcaggtctttcacgcacccccacaaggcatctactaaatggctct
ttaatagatggagaaccgcccatgaagaggaggagaggaaggaggaaaaatgtagaagga
cttgatctgttatttatgagcaacaaacggacatcgttgactgtagaggatgcagaagtg
accaaagcttttgaagaagatatggaagccctaccagcaaggaacattccatctcctggt
caactggacccagacactcgcatccctgtaatcaatctagaggatgggaccaggctggtg
ggagaggatgctcctaaaaacaaggatttagttgaatggcttaaattgcatcctacttac
actgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttttccccatttcag
aagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggatataaacaccttg
acaggagaagaaagggtacctgttgtaaataagcgaaatggaaagaagatgggtggagct
atggcccctccaatgaaggacttgccaagatggctggaagaaaatcctgaatttgctgtt
gctccagattggactgacattgttaaacagtctggttttgttccagagtccatgtttgac
cgtcttctcactggacctgttgtgagggaggaaggagcaagcagaagaggaagaaggcca
aaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatcaacttcgggaatc
aacccactactaatgaacagtctgtttgctggaatggacctcacaagcctccagaaccta
cagaacctgcagtctctccagctcgcaggcctcatgggcttcccgccagggctggcaaca
gcagctgctgctgctgggggggatgctaaaaatccagctgccatgttgcctctgatgttg
ccagggatggcaggattgcccaatatgtttggactaagcggattgttgaataacccgata
acggctactactggaaatgccactactgcttccggtcaaggagagactgaggatggtgct
tcaaaagctgaagagaagaaaaatgagaatgaagaggagaacaaagactctgagaaaagc
acagacactgtttctgctactgactctgcgaatggatctgtcagtgctgctactgcggcg
actaccgccactgccaccactaccaccaccaccaacactggattgcccacaaaccctctg
gccttcaatcctttcctgctgtctaccatggctcctggcctcttctatccatctgtgttt
ctacctccaggactgggaggattgactctgcccggtttcccagcactagcaggacttcag
aacgcagtgggctccaatgaagagaaggctactgacaaaactgaaggaactgcctttaaa
gatgaagaaaatctcgaaggcagtgatgcagaggagagcctcgataaaactgcagattcc
tccgttttagaagatgaaatagcacagggtgaagaactagactcacttgatgggggggaa
gaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
