Phalacrocorax carbo (great cormorant): 104047610
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Entry
104047610 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcao00535
]
104047610
00536 Glycosaminoglycan binding proteins [BR:
pcao00536
]
104047610
04091 Lectins [BR:
pcao04091
]
104047610
Proteoglycans [BR:
pcao00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
104047610
Glycosaminoglycan binding proteins [BR:
pcao00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104047610
Lectins [BR:
pcao04091
]
C-Type lectins
Lecticans
104047610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
CTD
V-set
UL45
Motif
Other DBs
NCBI-GeneID:
104047610
NCBI-ProteinID:
XP_009506275
LinkDB
All DBs
Position
Unknown
AA seq
2090 aa
AA seq
DB search
MTTLLLVFVCLRVITTAISVELSDSSDGLEVKIPEQSPLRVVLGSSLNIPCYFNIPEEQD
TSALLTPRIKWSKLSNGTEVVLLVATGGKIRLNTEYREAISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRQDTIEVLVKGIVFHYRAISTRYTLNFEKAKQACIQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRERCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYATAPEKFTFQEAFEKCHSLGARLATTGELYLAWKDGMDMCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLYVNQTGYPHPDSRYDAICYSGDDVETLVPGQFID
ETGGELGSAFTVQTVTQTEVELPLPRNATEEEARGSIATLEPIEITPTVTELYEGFTVLP
ELFATGVTVETAAPEEKNVTGGDVTRVWAVPEGVTTIALGTAITTEMAEVSSVEEAMGVT
TTPGLESTSVFTVEDQLVRMTAAPDVGLLPKQPISPTGVVFHYRAATSRYAFSFVEAQHA
CLENNAVIATPEQLQAAYEAGFDQCDAGWLRDQTVRYPIVNPRSNCVGDKEGSPGVRSYG
MRPASETYDVYCYIDRLKGEVFFATQPEQFTFPEAQQYCKSQNATLASVGQLHAAWKQGL
DRCYAGWLADGRLRYPIVTPRPACGGDAPGVRTVYQHYNQTGFPDPLSRHHAFCFRALPP
VEEEGFTSFFEEDVLATQVIPGVEGVPSGEEATVETEFATQPENQTAWGTEVFPTDMTLL
SVSPSAFPPATVIPEETSTDASISKVSGYVTESGEHQVSGESSASGWISGVPDTSEELTS
GVFELSGEHSGVGESGLPSVDLHTSGFLPGESGLPSGDLSGVPSGIVDISGLTSAEEDIS
VSTSRIPEISGMPSGVESSGLPSGFSGEISGTELVTGVSSGEESGLTSGFPTVSLVDTTL
VEVVTTVPGWQEEGKGSISVSGEGDLSGFPSTEWDTSGRAQGLPSGPELQLSGEPSGVPE
LSGEPSGGPELSGLPSGLDVSGEPSGTHEVSGLVDLSGLTSGIDGSGETSGITFVDASLE
EVTTTPSITEAEAKEILEISGLPSGGEDSSGTVSGSLDVSGEPSGHVDFGGSVSGVLEMS
GHPSGAIDSSGEVSGVDVTSGLLSGEESGLASGFPTVSLVDTTLVEVVTQMSVAQEVGEG
PSEMIEISGFPSGDRGLSGEGSGAVGTSGFPSGTGDFSGQPSGIPYISGDISGATDLSGQ
SSAVTDISGEASGLPEVTLVTSDLVEVVTRPTVSQXXXXXXXXXXXXXSFEPSGAASSSG
ELSGESPALPESGIETSTAYEISGETSTFPETSVETSTIHEISGETSAFPEFTTETSTIQ
EISGETSAFPEIIRETSTSQEARGETSGSPELSIGTSTVQEVSGETSAFPESSTETSTIQ
EISGETSAFPEIRIETFTIHEISGDSSAFPEIRIETSTNQEARGETSGYPEISIETSTVH
EISGETSAFPEISIETSTVHEISGIETSAFPEIRIETSTNQEARGETSGYPEISIETSTV
HGTSGETSAFPEIRIETSTNQEARGETSGYPEISIETSTVHGTSGETSAFPEISIETSTV
HELNGETSAFPEIRIETSTSQEARGEISAFPEISIETSTVREVSGETSAFPEISIETPTR
QEARGETSVYPEISIETSTVQEVSGETSAFPEIKIETSTNQETWGETSAFPEISIETSTV
PKTIGEASALPAGNIETAATSLASGELSGAHEKEIPDTTSGAVTHSITGISGETSVPDVV
ISTSTPDVEPTQGPMNPEEAQLETVSSPPAVSGQETETAVVLDNPHLLATATAVLPQASQ
EAIDTLGPTTEDLENCEEGWIKFQGHCYRHFEERETWMNAETRCRQHQAHLSSIITPEEQ
EFVNSHAQDYQWIGLSDRAVENDFRWSDGHSLQFENWRPNQPDNFFAAGEDCVVMIWHEQ
GEWNDVPCNYHLPFTCKKGTVACGDPPVVDNARTFGRKKDRYEINSMVRYQCNQGYIQRH
VPTIRCQPNGQWEEPRISCINPSNYQRRLYKRSARSQLRPNGKDMHRPTH
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactattagtgtttgtgtgtttgcgagtcatcaccacagccatctctgtg
gaactctcagacagtagtgatggcctggaagtgaagatacctgagcagtctcccctgcgt
gttgtcctgggaagctccctgaacatcccctgttacttcaacatcccagaggaacaggac
accagtgctctgctgaccccacggatcaaatggagcaaactctcaaacgggactgaagtt
gtcttgctagtggccactggtgggaaaatccgtctcaacactgagtacagggaggcaatc
tctttgcccaattaccctgccatccccaccgatgccaccttggaaatcaaggcgctgaga
tccaaccacactgggatttaccgctgtgaagtgatgtacggtattgaggacagacaagac
acaatagaggtcctagtgaaaggcatcgtattccactacagagcaatctccacaaggtac
accttgaactttgaaaaagcaaagcaggcctgtatccagaacagtgctgtcattgctact
cctgagcagctgcaggctgcctatgaggatgggtacgagcagtgtgatgctggttggctg
gctgatcagactgtcaggtaccccattcactggccccgggagcgctgctatggtgacaag
gatgaatttccaggagtgaggacctatggtgtccgagagccagatgaaacctatgatgtt
tactgttatgcagagcaaatgcaaggtaaagtcttctatgccaccgcccctgaaaagttc
accttccaagaagcttttgaaaaatgccacagtttgggagcccgtttggccaccacagga
gagctgtacttagcctggaaggacggcatggacatgtgcagtgcaggctggctggccgat
cgcagtgtccgctaccccatttccagagcacggcccaactgcggaggaaacctggtgggc
gtgcggacagtgtacctgtatgtcaaccaaacagggtatcctcaccctgactctcgctac
gatgccatctgctatagtggggatgacgttgagactctagtcccagggcagttcatcgat
gagacggggggcgagctgggcagcgccttcactgtccagactgtcacccagactgaagtg
gagctacctctgccacgcaatgccacagaggaggaggcccgcggcagcattgccaccctg
gagcccattgagatcacacccaccgtcactgagctctatgaaggcttcaccgtcctgccc
gaactcttcgccactggtgtcacagtagagacagctgccccagaggagaagaacgtgacc
gggggggatgtcacaagggtgtgggctgtacctgaaggagtcaccaccatagccttaggc
actgccatcaccactgaaatggcagaggtgagctcagtggaagaggccatgggggtgact
accacaccaggactagagtctacttcagtgttcacagtggaagatcagctcgtgcgaatg
acagcagcccccgatgttggtctcctccccaagcagcccatctcccccacaggtgtggtg
tttcactaccgtgccgccaccagcagatatgccttctcctttgtcgaagcccagcatgcc
tgcctggagaacaatgcagttatcgccactcccgaacagctccaggctgcctacgaggct
ggctttgaccagtgtgatgcaggctggctgcgggaccagacagtcaggtatcccattgtg
aatccccgaagtaactgcgtaggagataaagagggctcaccaggtgtgcggtcgtacggc
atgcgcccggcctcagagacctacgatgtgtactgctacattgataggctcaagggtgag
gtgttctttgcaacccagccagagcagttcaccttcccagaagctcagcagtactgcaag
agccaaaatgccacactggcttctgttggccaactccacgctgcctggaaacagggcctg
gacagatgctatgctggctggttagcagacggcaggctccgctatcccatcgtgaccccc
cgtcccgcctgcggaggggacgcacctggtgtgagaaccgtctaccagcactacaaccag
acgggttttcctgacccactgtcccggcatcacgccttctgcttcagagctctgccacct
gtggaggaggaggggttcacctcattctttgaagaagatgtgctggcaacccaagtgatt
cctggagtggaaggggtaccctctggggaggaggcaaccgtggagacggagtttgccact
caacctgagaatcagacagcctgggggacagaggtctttccaacagatatgacgctgctt
tcagtgagtccatctgcttttcctccagctactgtaataccagaggaaacaagtactgat
gcttccatcagcaaagtgtcagggtacgtgactgaatctggagaacatcaagtcagtggt
gaatcttcagcatccggatggatatctggagtcccggatacaagtgaagaactgacttct
ggagtttttgaacttagtggagaacactcaggggttggagaaagtggattaccatcagta
gacctgcataccagtggctttctacctggagaaagtgggctaccctcaggggacctgagt
ggggtgccttctggcattgttgacatcagtggcttaacttctgcagaggaagatatatcg
gtgtctacttcaaggataccagaaattagtggaatgccatctggagtggaaagcagtggg
ctgccttctggatttagtggagaaatctctggcactgagctagtcactggtgtgtcatct
ggagaggaaagtggactcacctctggttttcctacggtctctcttgtggataccacattg
gtggaagttgtcacaaccgtgccaggatggcaggaggaaggaaaaggatcaatcagtgtc
agcggtgaaggagatctttcagggttcccatctaccgagtgggacaccagtggcagagcc
caagggttaccctcaggacctgagctccaactcagtggggagccctctggggtgcccgag
ctcagtggggagccctctggagggcctgagctcagcgggttgccctcaggactggatgtc
agtggagaaccatcaggaacacatgaggtcagtggcctggtggacctaagtggccttact
tctggtatcgatggaagtggtgagacctcaggcattacctttgtagatgccagtttggag
gaagtgactacaaccccctcaattacagaagcagaagcaaaagagattttggaaatcagt
ggattgccttcaggaggtgaagactcatcaggcacagtgtctggaagtttagatgtcagt
ggtgagccttctgggcatgtagactttggtgggagtgtttctggagtgctcgagatgagt
ggacacccaagtggagcgattgacagcagtggagaagtctctggagtcgatgtcaccagt
ggtctactgtctggagaggaaagtggacttgcctctggctttcccacagtctctcttgtg
gataccactttggtagaagttgtaacacagatgtcggttgcacaagaggtgggagaaggg
ccatctgagatgatagaaatcagtggatttccttctggagacagaggactatctggagaa
ggatctggagctgtggggactagtgggtttccttcagggacaggagacttcagtggtcag
ccatccgggatcccatacatcagtggagacatctctggagccacagatctaagtggacaa
tcttcagcagtgactgatatcagtggggaggcctcaggtcttccagaagtcactttagtt
acttctgatttagtagaagttgtgacaagaccaacagtatcgcaggnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnagttttgagccaagtggtgcggcctcttcatctggt
gaactaagtggggaaagtcctgcattgccagaaagtggtatagaaacatcaacagcttat
gaaattagtggggaaacatccacatttccagaaactagtgtagaaacatccactattcat
gaaatcagtggagagacatctgcatttcctgaatttaccacagaaacatcaacaattcaa
gaaatcagtggggaaacatctgcatttcctgaaattatcagagaaacatccacaagtcaa
gaagccaggggtgaaacatctggctctcctgaacttagcataggaacatccacagttcaa
gaagtaagcggggaaacctctgcatttcctgaaagtagcacagaaacgtccacaatacaa
gaaattagtggggaaacatctgcatttcctgaaattagaatagaaacgttcacaatccac
gaaatcagtggtgatagttctgcatttcctgaaattagaatagaaacatccacaaatcaa
gaagccaggggtgaaacatctggctatcctgaaattagcatagaaacttcaacggtccac
gaaatcagtggggaaacctctgcctttcctgaaattagcatagaaacttcaacagtccac
gaaatcagtggtatagaaacatctgcatttcctgaaattagaatagaaacatccacaaat
caagaagccaggggtgaaacatctggctatcctgaaattagcatagaaacatcaacagtc
cacggaaccagtggggaaacatctgcatttcctgaaattagaatagaaacatccacaaat
caagaagccaggggtgaaacatctggctatcctgaaattagcatagaaacatcaacagtc
cacggaaccagtggggaaacatctgcatttcccgaaatcagcatagaaacttcaacagtc
cacgaactcaatggggaaacatctgcatttcctgaaattcgaatagaaacatccacaagt
caagaagcccgaggtgaaatctctgcctttcctgagattagcatagaaacttctacagtc
cgtgaagtcagtggggaaacatctgcattccctgagattagcatagaaacaccaacaagg
caagaagccaggggtgaaacatctgtctatcctgaaattagcatagaaacatccacagtt
caagaagtaagtggggaaacctctgcatttcctgaaattaaaatagaaacatccacaaat
caagaaacctggggtgaaacatctgcatttcctgagattagcatagaaacatccacagtc
cccaaaaccattggagaagcatccgctttgcctgctggtaacatcgaaacagctgccaca
tctttggccagtggtgagctctctggtgctcatgagaaggaaattcctgacacaacatct
ggagctgtgacacactcgatcacgggcatttcaggggaaacctctgtcccagacgttgta
attagtaccagtactccagatgttgaaccaacacagggacccatgaaccctgaagaggct
cagcttgaaacagtgtcttccccgcctgcagtgtcaggacaagagacagagacagctgtt
gttctagacaatccccatctgctggccaccgctactgctgtcctgcctcaagcgtcacaa
gaagcaatagacacattaggacccactacagaagacctggaaaactgtgaggaaggctgg
atcaagttccagggccactgctacaggcattttgaagagagggagacttggatgaatgca
gagaccagatgccgacaacatcaagcccacctgagcagtatcatcaccccagaagagcaa
gaatttgtgaacagccacgcacaggactaccagtggatcggcctcagcgacagagctgtg
gagaacgacttccgttggtccgacgggcactccctgcaatttgagaactggaggcccaac
caacccgataacttctttgcggcgggtgaggactgcgttgtgatgatctggcacgagcaa
ggcgaatggaacgacgttccctgcaactatcatctccccttcacctgcaagaaaggaaca
gtggcctgcggggacccccccgtggtagataacgccaggacctttggtaggaagaaggac
cgctatgaaataaactccatggtgcggtaccagtgcaaccaaggctacatccagcgccac
gtgcccacgattcggtgccagcccaacgggcagtgggaggagccgcggatatcttgcata
aacccctccaactaccagcgcaggctatataagaggagcgccaggagccagttgagaccc
aacggcaaagacatgcacagacccacccattag
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integrated database retrieval system
