Phalacrocorax carbo (great cormorant): 104048052
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Entry
104048052 CDS
T08596
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1
KO
K06491
neural cell adhesion molecule
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pcao04514
Cell adhesion molecule (CAM) interaction
pcao04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
104048052 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104048052 (NCAM1)
04517 IgSF CAM signaling
104048052 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104048052 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104048052 (NCAM1)
04090 CD molecules [BR:
pcao04090
]
104048052 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
pcao00536
]
104048052 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pcao00537
]
104048052 (NCAM1)
04091 Lectins [BR:
pcao04091
]
104048052 (NCAM1)
Membrane trafficking [BR:
pcao04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
104048052 (NCAM1)
Cell adhesion molecules [BR:
pcao04515
]
Immunoglobulin superfamily
NCAM1/2
104048052 (NCAM1)
CD molecules [BR:
pcao04090
]
Proteins
104048052 (NCAM1)
Glycosaminoglycan binding proteins [BR:
pcao00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
104048052 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pcao00537
]
Others
104048052 (NCAM1)
Lectins [BR:
pcao04091
]
I-type lectins (Siglecs)
104048052 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
FN3_DSCAM-DSCAML_C
C1-set
Ig_C17orf99
V-set_CD47
C2-set_3
Ig_PDGFR_d4
Pur_ac_phosph_N
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
104048052
NCBI-ProteinID:
XP_009506754
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
RINVLVLQSRNLVWTIFCMFISLPASLQVDIVPSQGEISVGESKFFLCQVAGEAKYKDIS
WFSPNGEKLTPNQQRISVVRNDDFSSTLTIYNANIDDAGIYKCVVSSVEEGDSEATVNVK
IFQKLMFKNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY
LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPSVRARQSTMNATANLSQSVTL
ACDADGFPEPTMTWTKDGDPIEQADDEEKYSFNYDGSELIIKKVDKSDEAEYICIAENKA
GEHDATIHLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEK
TLDGRIVVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQGPVA
VYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSEND
FGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFDEPEATGGVPILKY
KAEWRALGEGEWHSRLYDAKEANVEGVITITGLKPETTYSVRLSAVNGKGVGEISLPSDF
KTQPVREPSAPKLEGQMGEDGNSIKVNVIKQDDGGSPIRHYLIKYKAKHSSEWKPEIRLP
SGXXXXXXXXXXXXXXYVIAENQQGKSKPAHYAFRTSAQPTVIPASTSPTSGLGTAAIVG
ILIVIFVLLLVAVDVTCYFLNKCGLLMCIAVNLCGKSGPGAKGKDMEEGKAAFSKDESKE
PIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHPADTAATVEDMLPSVTTGTTNSDTIT
ETFATAQNSPTSETTTLTSSIALPATAIPDSNSMSPGQATPAKGAATSVSSPPPSSTPKV
APLVDLSDTPSSTPATNNLSSSVLSNQGAVLSPSTVANVAETSKAVAGNKPAAPSPANLT
SPPAPSEPKQEVSSTKSPEKEAVQPSTVKSPTETTKNPSNLKSEAASGSTTNPSQNEDFK
MDEGTFKTPDIDLAKDVFAALGTTTPARVTSGQARELASSTADSSVPAAPAKTEKIPVED
KPEVQATETKTPPAEVKMVPNEATQTNENESKA
NT seq
3343 nt
NT seq
+upstream
nt +downstream
nt
aaggataaatgttttagtattgcaaagcagaaatctggtctggaccatcttctgcatgtt
tatttctttgccagcctctcttcaagtggacattgttccaagccagggagagatcagtgt
tggagaatctaaattcttcctatgtcaagtggcaggggaggccaaatacaaagacatttc
ctggttttcccctaatggtgagaagctgacgccgaaccaacagcgcatctcagtggtgcg
aaatgacgacttctcctccactctcaccatctacaacgccaacattgatgatgctggcat
ctataagtgtgttgtcagtagcgtggaggagggagactccgaggccaccgtcaatgtgaa
aattttccaaaagctgatgttcaagaatgctcccactcctcaggaattcaaggaagggga
tgatgctgtgattgtgtgtgatgtggtcagctcactgcctcctaccatcatctggaagca
caaaggcagggatgttatcctaaaaaaagatgttcgatttatagtcctgtccaacaacta
cctgcagatccggggaatcaagaaaacagatgaagggacataccgctgtgagggccggat
cttggctcgtggggagatcaacttcaaagatattcaggtcatcgtaaatgtacctccttc
tgtgcgcgccaggcagagcacgatgaacgccactgccaacctcagccagtctgtcacctt
agcatgtgatgctgatggctttcctgagccaaccatgacgtggaccaaggatggagaccc
catagaacaggccgatgatgaagagaaatacagttttaactacgatgggtctgagctcat
catcaagaaggtggataagagtgacgaagcagaatacatctgcatcgctgagaacaaggc
tggcgagcatgatgccactattcatctcaaagtttttgcaaaacccaaaatcacctatgt
ggagaataaaacggccatggagctggaggatcagattacactgacctgtgaggcatctgg
ggacccaatcccttccatcacctggagaacttccaccaggaacatcagcaatgaagagaa
gaccctggatgggcgcatcgtagtacgtagccatgcccgggtgtcgtccctgactctcaa
agaaattcagtacactgatgccggagaatatgtatgcacagccagcaacaccatcgggca
ggattcccaagccatgtaccttgaagtgcagtatgcccccaagcttcagggccctgtggc
tgtctatacgtgggaaggaaatcaagtgaacatcacctgtgaggtatttgcttaccctag
tgctgtcatctcctggttccgggatggacagctgcttcccagctcaaactacagcaacat
caagatctacaacactccatcagcaagctacctggaggtgacaccagactctgaaaatga
ctttgggaactataactgcactgctgtgaaccgcattggtcaggagtcctcagagttcat
tcttgtgcaggcagatactccgtcctctccttccattgacagagtggagccctattccag
tactgcccaggtggagttcgatgagcctgaagctaccggtggggtgcccatactcaagta
caaagcggagtggagggcactgggagaaggagaatggcattcaaggttgtatgatgcaaa
agaagcaaatgtggagggtgtgatcactatcactggcctgaaacctgaaacaacctactc
tgtgagactgtctgcggtcaatggcaagggtgtgggtgagattagcctgccatctgattt
caagacacaaccagttcgggaacccagcgcacccaaactggaaggtcagatgggagaaga
tggaaactccattaaagtgaatgttatcaagcaggatgatggtggctccccaattagaca
ttatctgatcaaatacaaagctaagcattcctcagaatggaaaccggagatcagacttcc
gtctggcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatgtgatagc
tgaaaaccagcaagggaagtccaagccagctcactatgctttccgaacttctgctcagcc
tacagtcatcccagccagcactagccctacatcaggccttgggactgctgccatcgtagg
cattctcattgttatctttgtgctgctcctggtggctgtggatgtcacctgctacttcct
gaacaagtgtggcctgctgatgtgtattgctgtcaatttatgcggcaaatctggtccggg
agccaagggcaaagacatggaagagggcaaagccgccttctcgaaagatgagtccaagga
gcctattgtggaggtgcggactgaagaggagcggacccccaaccacgatgggggaaaaca
cacagagcccaatgagaccaccccgctgacggagccagagcaccctgccgataccgcagc
tactgttgaggacatgctgccttctgtaactacgggcaccactaactctgacactatcac
tgaaacctttgccactgctcagaacagccccaccagcgagaccactacgctgacctccag
tattgccctgccagccacagccattcctgactcaaactccatgtcgcctggccaggctac
tccagccaaaggggcagccacctcagtctcttcaccaccaccctcctccacccccaaggt
ggcgccccttgttgatctcagcgataccccaagctctactccagctactaataatttgtc
ttcaagtgtcttgtccaaccaaggtgcagtgctcagccccagcactgtggctaacgtggc
cgaaacatccaaagcggtagctggtaacaagccagctgccccaagccctgcaaacctcac
tagccctccagctccatcagagcccaagcaggaggtctcaagcaccaagagccctgaaaa
ggaagctgtgcagcccagtacagtgaagagcccaacagagacaaccaagaacccaagtaa
tctgaagagcgaggctgcttcaggcagcaccacaaacccctcacagaatgaggactttaa
aatggacgaagggaccttcaagacaccagacattgatcttgcaaaggatgtttttgcagc
tcttggcactactactcctgccagggtgactagcgggcaagctcgtgagcttgcttcttc
cactgcagacagctctgtacctgctgcacctgcaaagaccgagaaaatcccagtagaaga
caaacctgaagtgcaagcaacggaaactaagacacctccagcagaagtcaagatggtccc
caatgaagccacacaaacaaatgaaaatgagagcaaagcatga
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