Phalacrocorax carbo (great cormorant): 104048056
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Entry
104048056 CDS
T08596
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104048056 (COL17A1)
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Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104048056
NCBI-ProteinID:
XP_009506759
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
DQGEKGSRGMTGEQGSRGMPGPPGEPGAKGPVGQAGRDGQPGKKGEPGFMGMQGARGPPG
PSGDAGQPGLTGPQGPPGLPGNPGRPGAKGEPGAPGKVISAEGSSTIALPGPPGPPGPAG
PAGPPGVPGPVGPAGLPGQQGPRGEKGSPGEAVIETIKTEVSSLTSQMLADLQGRAGPPG
PPGPPGESVQGPPGPRGPPGLPGPPGPPGRPGSSMSTSETFLTGPPGPPGPPGPKGDQGE
RGPRGFTGEPGEPGLSAFSSHGERITIQGPPGVPGPPGPPGPKGDAGVPGAPGIPGASRG
GSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYVTDYLKSDSIRHYLTGAQGPPGPPGPPGI
ITTADGMSLDYAELATRVMNYMTSSSDRYQSFASSVSTTSVLYQELLDMLQREEIRQYLT
GPQGPPGPPGPGGDGMSLSLDYDELTRRFISYLTNSGMSIGLPGPPGPPGTPGISYGDLT
AYLQNSEFSGLVGPPGPAGPPGPPGIPGSSGISLEDISAYLQSVGYSSLSGVQGPPGPPG
PPGPPGFSGTGLLSYGDITHSDEFRSELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDS
GLVAGSMSSSYHGLRTSEHLHGGSLGAEGSHGGSLGTGSSYGSSMSSMSSYRASAGSDGS
YDAAMGSDGSFDALLTEEGSHRRAASSSRSYSNSFTGSLDYNELARHVSESLQSQGILQD
LMSYTVQGPAGPPGPPGPPGISRVFAAYGNVTEDLMDFFRTYGTIQGPPGEKGERGYPGP
KGDPGPMGPPGRHGQRGPKGEKGEKGEQVYVGRRKRRSVGV
NT seq
2468 nt
NT seq
+upstream
nt +downstream
nt
gcgatcagggtgagaagggttctcgtggaatgacaggtgaacaaggctcaagaggaatgc
ctggtcctccaggagagccaggagctaaaggacctgtaggacaagctggccgtgatggac
agcctggtaaaaaaggtgaaccaggttttatgggaatgcaaggagcccgaggccctccag
gaccctctggagatgcaggacagccaggtctcacaggaccccaaggacctccaggacttc
caggcaacccagggcgaccgggggctaaaggagaacctggagctccaggaaaagtcataa
gtgctgagggttcatcaactattgctctgccaggcccaccaggtcccccaggcccagctg
gccctgctggacccccaggtgttccaggtcctgttggaccagctggtctccctgggcagc
aaggtccgcggggtgagaagggatcccctggtgaagctgtgatagaaactataaaaacag
aagtctcatcattgacatctcaaatgctggcagatttacaagggcgagcagggccaccag
gtccccctggaccaccaggtgaatctgtgcagggaccccctggacctcgtggccccccag
gattgccaggacctccaggcccaccagggagaccaggatcttccatgtccacctcagaaa
cattcctcacaggcccaccaggtccaccaggcccaccaggcccaaagggagaccaaggcg
aacgaggtccacgaggattcacgggagaaccaggagagcctggcctttcagcattctcct
cccatggtgaaagaatcaccatccagggacctccaggagttccaggcccaccaggcccac
ctggacccaaaggtgatgcaggtgtcccaggcgctcctggaatcccaggagcatctcgag
gtggatccagacaaattcagggacccccaggacctcctgggccacccggtcctcctggcc
caggtggaagttcatctcaagagattcagcagtatgtcactgactacctgaaaagtgaca
gcataaggcattatttgactggtgcccaaggccctccaggccctccaggcccacctggaa
tcatcaccactgcggatgggatgagcttggattatgcagagctggctacccgtgttatga
actatatgacaagctcttcagatcgctatcagtcatttgccagttcggtatcaactacat
ccgttttgtaccaagaacttctggatatgcttcagagggaagaaattcgtcagtatctga
ctggacctcagggcccaccaggacctcctggaccagggggagatggcatgtctctgtcac
tggattatgatgagctgaccagacggtttatcagctacttgacaaattctggaatgagca
ttgggctccctggaccacctgggcctccagggacacctggtatatcttacggtgacctga
cagcatacctgcaaaactctgaattcagtggtcttgttgggccccctggtcctgcagggc
ccccaggacctccagggatccccggatcatctggcatctctctggaggacatctctgctt
acctacaaagtgtgggatactcctccctctctggagtccaaggtccacccggccctcctg
gccctccaggaccacctggcttctcaggaactggcctcctgtcctatggtgacattaccc
acagtgacgagttcaggagcgagctgatccagtacctgaagagtgatgaagttcgaagct
acatctcagggccgcctgggccccctgggccacggggaccaccaggacccaaaggagaca
gtggcttggtggctgggtctatgtcgtcatcataccatgggttacggacttccgaacact
tgcacggaggatctcttggtgctgagggatcccatgggggatcactgggcacaggcagct
catacggcagctccatgagcagcatgtcatcttaccgtgcctcagctggcagcgatggct
cttatgatgctgccatgggcagtgatgggtctttcgatgcattgctaacagaggagggat
cacacaggagagcagccagttcaagcagatcctacagcaactccttcactggttccctgg
attacaatgagctggcacgccacgtgtcagagagcctacagagccaaggtattctccagg
acctgatgtcttacactgtacagggacccgcaggtcccccaggccctcctggtccccctg
gcatcagcagggtgtttgcagcctatggcaatgtcaccgaggacctcatggacttcttta
gaacatatggtaccatccaggggccacccggtgaaaagggggagaggggttatcctggac
ccaaaggcgaccctggaccgatgggcccaccaggacgccatgggcagaggggaccaaagg
gagagaaaggagagaaaggtgaacaagtgtatgttggcagaagaaaacgaagaagtgttg
gggtttaa
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