Phalacrocorax carbo (great cormorant): 104048086 Help Entry 104048086         CDS       T08596                                  Name (RefSeq) ATP-dependent RNA helicase DDX3X   KO K11594   ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04622   RIG-I-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:pcao00001]  09150 Organismal Systems   09151 Immune system    04622 RIG-I-like receptor signaling pathway     104048086  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pcao03019]     104048086    03041 Spliceosome [BR:pcao03041]     104048086    03036 Chromosome and associated proteins [BR:pcao03036]     104048086 Enzymes [BR:pcao01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      104048086 Messenger RNA biogenesis [BR:pcao03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      104048086    mRNA cycle factors     Common to processing body (P body) and stress granule      104048086 Spliceosome [BR:pcao03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA helicase-like proteins     104048086 Chromosome and associated proteins [BR:pcao03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     104048086 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII Utp25_C Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  104048086 NCBI-ProteinID:  XP_009506791 LinkDB All DBs Position Unknown AA seq 635 aa AA seqDB search FSGLDLNSSDSQSEGSSSSKGRYIPPHLRNREASKQGFDSGGWSSSRDKDAYSSFGARSD RGSKPSFFDRGNGSRGGRYDERGRGSDYDRSGFGRFDRGGNSRWCDKSDEDDWSKPLPPS ERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRP TPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRR KQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVAT PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA TFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSL TLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAAR GLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEA KQEVPSWLENMAYEQHHKGGGSRGRSKSRFSGGFGARDYRTSSGSGSSSFSSSRSTSSRS GGSGSRGFGGGYGGFYNSDGYGGNYNSQGVDWWGN NT seq 1908 nt NT seq  +upstreamnt  +downstreamnt ttttctggtctagacttgaattcctcggactctcagagtgaaggaagctcttcaagcaaa ggccgatacattcctcctcatctgcggaacagggaagcttcaaaacagggttttgatagt ggtggctggagttctagcagagacaaggatgcgtacagcagctttggtgcacggtctgac cgcggatcaaaaccaagcttctttgaccgtggaaatggatcaagaggaggaaggtatgat gagcgtggaagaggtagcgactatgataggagcggctttggtagatttgaccgtggtggg aatagccgctggtgtgacaaatcagatgaagatgactggtcaaagcctcttcccccaagt gaacgcctggaacaagagctcttttcagggagcaatactggcattaactttgagaaatat gatgacattcctgttgaagcaacaggcagtaactgtcctccacatattgaaagtttcagt gatgttgacatgggagaaattattatggggaacattgagctcacacgctacacccgtcct actccagtccagaaacatgcaatacctattattaaagaaaagagagacttgatggcctgt gctcagacagggtctgggaagacagctgcatttcttctaccaatattgagccagatttat gcagatggccctggtgatgcattgagagccatgaaggagaatggaaggtatgggcgccgt aagcaatacccaatctcactggtcttggctcccacgagagaactagctgtgcagatctat gaggaagccagaaagtttgcataccgttccagagttcggccctgtgttgtatatggtggt gcagacattggtcagcagatacgtgacttggaacgtggatgtcacttgcttgtagcaact ccaggacgactggttgatatgatggagaggggaaagattggactggatttttgcaagtac ctggtgcttgatgaagctgacagaatgcttgatatgggatttgaacctcaaattcgtcga attgttgagcaagatactatgccaccaaagggtgttcgtcataccatgatgttcagtgct actttccccaaggaaatccagatgcttgctcgtgactttcttgatgaatatatctttctg gctgttggcagagtaggttctacatctgagaatatcacacagaaagtggtatgggtggaa gagtcagacaaacgatcatttctgcttgacctgctaaatgccacaggcaaggattccttg accctggtgtttgtggaaactaaaaaaggtgcagatgctcttgaggacttcttgtaccat gaaggatatgcctgtacaagtatacatggagatcgctctcaaagagacagagaggaagcg ctgcaccagttccgttcgggcaagagcccaattcttgttgccacagcagtagcagcaaga ggactggatatctcaaatgtaaagcatgtcataaactttgacttgccaagtgacattgag gagtatgtacatcgtattggtcgtacgggtcgagtaggaaaccttggtcttgccacctca ttcttcaatgagaggaacataaacatcaccaaggacttgcttgatcttcttgttgaggcg aagcaagaagtgccatcttggctggaaaacatggcttatgaacagcatcacaaaggaggt ggcagccgtgggcgatccaagagtaggttcagtggaggatttggtgccagagactatcga acaagtagcggttctggcagcagtagctttagtagcagtcgatcaaccagcagccgcagt ggaggaagtggcagtagaggatttggaggtggttatggaggcttctacaacagtgatgga tatggaggaaactataactcccagggggttgactggtggggcaactga

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