Phalacrocorax carbo (great cormorant): 104048097
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Entry
104048097 CDS
T08596
Symbol
NUP214
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup214
KO
K14317
nuclear pore complex protein Nup214
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104048097 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104048097 (NUP214)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104048097 (NUP214)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Nup214_FG
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104048097
NCBI-ProteinID:
XP_009506803
LinkDB
All DBs
Position
Unknown
AA seq
2076 aa
AA seq
DB search
DFQFRALKKVRIFDAPDDLPKERSSLLAVSNKYGLVFAGGGTSLQIFHTRNLLMQNQMGE
DPNKIVENVQSTSVPLKFPVQHLALNCDNLTLSVCMMSSEIGSFIGFFDVRTFLNQAKQQ
KRAFAYHKLAKDSGSAAMVNDLKWNPASPAMVAICLSDGSISVLQVTDSVKVYATLPSSV
AVTSVCWSPKGKQLAVGRQNGTVVQYLPNLQEKKVIPCPPFYDSDNPVKVLDVLWIGTYV
FTIVYAAADGTLETPPEVVIAILPKKEEKRPEKFVNFMEPCYGSCSERQHHYFLNYVEEW
DLVLAASAASTEVSILARQGDQNWESWVLEDSSRAELPVTDKSDDTLPVGVAVDYTSNMP
IPISDEKTLAPAPVLILLSTDGVLCPFYMINQNPGVRSLIVTPEPLLLAGERVPKSAGSS
ATTPTTPPTSLKPDQVPGVAPTAPASSQPPAGGGAAAFSFMPSTVKMPGTTSSDPPPYPF
ATDASRQAPAPSLTGAAMFSFSSASPKASMTPTPSVGTTTATATSFLFGSMNFKPAADSS
PGPPLSSTPVAQKSSFAPSASSVKVNLNEKFTAVDTSSPTSSSGQCTSTMFSFSTTSKTA
SGGPLSQSTPLAASPTTPLKASTPVPAAVARPAQNMPSASLLQKTAKITPSAAKPSSTQG
KSALPSTALEKQAHQWKDSDPVIAGIREEIAHFQKEMEELKARTSKACFQVGTPEEMKML
RTESDDLHTFLLEIKETTESLHGDISILKTTLLEGFAGVEEAREQNERNHSSGYLHLLYK
KPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQKRKQKRLIVPERETLFNT
LANNREIINQQRKRLNQLVNSLQQLRLYNQTSQWSVPSDTSSFSNAQSFDSDLESLRNAL
MKTTLESHAKPLPKVPAKLSPVKQAQLRNFLAKRKTPPVRSTAPASLSRSAFLSTRYYED
LDEVSSTSSVSQSLENDDSQAVDQEEEAAPVQVPRHAPVVRTPSIQPGLMAQSPSFGKQH
LSLGTLMPTSSNRIIPQGADSTMLATKTVKHGAPAPTVTVPAPQAAAAAALRRQMANQSP
AVSTSLTESTLKNVPQVVNVRELKTGALTPAVSAVIGSSVPHSAAQAVHQVLATVATNQA
KQTPLTSSLKGQTPPSTVCAPCPMASTAGPTSSGNKISGQGTVKTVTAVTSSTVTSVQAT
TAQLNKAFSFSSVGSGFNFGVVTSAASSPTLPSLASSQAPGKESTQTDSFSLAGGSKFGV
VPESSFAFGSLKPASASGALVGNTSSADGTQSNKPAATTSSASSTAYGKLDIPPSKPGDL
LFQSNLAGETLGSFSGLRVGQVDDNAKTTAKAPSTSAAGAQSTKVSTIPSGFTFGAPLSL
GKAGEAASTAVTSAGTASPSISTSATGSLFGNVQLTNTGSSGVFNLGGSSGNKPTFSFGI
QQANSMSTSTSTPSTLSASTSLSFGSFLSSSQTAVPAATSSKGAGDAKLPSVSEKPSENE
SVSAGSSPPMTQSPQPQVQLSESIKEPASPQATTGDAVSAGSSTTLAAPPPDAVATPAST
SDLKAPVPPTISASAPPDQNVSATTSTANIASPAEATSALAATSDVTTCVQSPAVGASVF
APTSAGSSVFSQPPSSSSSSSAFSQPAGDTTATPSTPPVFGQLPAGTTASSPFGQLTTST
LSTATATTQAASSGFGTSAFGTTTTGGFGQPAFGQAPTFGQPASSSSGGFTFSQSGFGTM
PAFGXAASTAASSSGNVFGAPASTNSASSFSFGQPSASTGGGLFGQSSPPVFGQNTGFGQ
GGSVFGSAAAVTTTTSSAGFSFCQASGFGSSNTGSVFGQAANTGGTVFGQQPSSSSGGLF
GAGSGGRDGGFFSGLGGKPSQDAANKNPFSSSSGGFGSAASQNSSSLFGNSGAKTFGFGS
SSFGEQKPTGTFSSGGGSVASQGFGFSSPNKAGGFGAAPVFGSPPTFGGSPGFGGVPAFG
SAPTFSSPLGSTGGKVFGEGTAAASAGGFGFGGTSNNTASFGTLANQNTPTFGSLSQQGT
GFGTQSSGFSAFGTGGGGFGFGSSNTSSSGFSGWRS
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
gattttcagttcagagcactgaagaaagtccgcatctttgatgccccagatgatcttccc
aaagagcgctccagccttcttgcagtgtctaacaaatatgggctggtctttgctggtgga
ggaaccagcctgcagatctttcacactagaaatcttctcatgcaaaaccagatgggagaa
gatcccaataaaattgtggagaatgttcagagtacctcggttcccctgaagtttcctgtg
cagcacctggctctaaactgtgataatctcacgctgtccgtctgtatgatgtccagtgag
attggttccttcatcggcttttttgatgtccgcacgttcttaaatcaggcaaaacagcag
aaacgtgcatttgcttatcacaaactggccaaggactcgggaagcgcagcaatggtcaat
gacctgaagtggaaccccgctagtcccgccatggtggccatctgcctgtccgatggcagc
atctctgtcctgcaggtcacagactctgtgaaagtgtacgccacgctgccttcctctgtt
gctgttacatctgtttgttggagcccgaaggggaaacaactggctgtagggaggcaaaat
ggcaccgtggtgcaatatctgcctaatctgcaggagaagaaagtaatcccttgtcctccc
ttttatgactcggacaatcctgttaaagttttggatgtactgtggattggcacctatgtc
tttactattgtgtatgcagcggctgatgggacgctggaaacgcctccagaagtggtcata
gccatattgcctaaaaaggaagagaagcgaccagagaagtttgtgaatttcatggagcct
tgctatgggagctgctcagagagacagcatcattacttcctcaactatgttgaggaatgg
gatctagttctggcagcttcagcagcttccacagaagtcagcattcttgccaggcaaggg
gatcagaactgggaatcatgggttttggaggactccagcagagcagaacttcctgtgaca
gataagagcgatgatactctgcctgttggtgttgccgtagactacaccagtaacatgcct
atcccgatcagtgatgagaagacccttgctccagctccagttctgatcctgctctctaca
gatggtgtgctctgcccattttacatgatcaatcaaaacccgggggtcagatcacttatt
gtgaccccagagccgttgctgttagcaggggagagagttccgaaatcagcaggaagtagt
gccacaactccaaccactcctccaacttctttaaagcctgaccaggtaccaggtgttgct
cctactgcgcctgcctcaagtcagcctcctgcggggggtggagcagctgctttttccttt
atgccttcaactgtgaagatgcctggcactaccagcagtgatcctccaccttaccccttt
gccactgatgcctccagacaagccccagctcccagtctgactggagcagcaatgttctct
ttctcctctgcttctccaaaggcatccatgactcccactccttctgtaggcaccactaca
gctactgccacctcctttttgtttggatccatgaactttaaaccagctgcagacagctca
cctgggccaccactgtcgtctacacctgttgcacagaagtcgtcttttgccccttcagct
tcttcagttaaagtgaacctcaatgagaagttcactgctgtagacacctcttctcccact
agcagcagtggtcaatgcacttccacaatgttttcattctcaaccacttcaaaaactgct
tctggaggtcctctgagccagtccacacccctcgcagcctcccctaccacaccactgaag
gcttcgacccctgtgcctgccgcagtggcacgtcctgctcaaaacatgccttcagcttct
ttactacagaagacagccaaaatcaccccatctgcagcaaagccaagctctactcagggc
aaatcagcactccctagcacagctttagagaaacaggcccaccagtggaaggattcagat
cctgtcatagcaggaatcagagaggagatagcacattttcaaaaggagatggaggaactg
aaggcccggacttccaaagcctgtttccaagttggtactccagaggaaatgaagatgtta
cgaactgagtcagatgatcttcataccttcctcttggaaattaaagagacaacagagtca
cttcatggagatattagtattctgaagacaaccttgctggagggatttgcaggggtagaa
gaggctagagaacagaatgaacggaatcatagctcggggtatttacacttgctgtataag
aaacctttggatcccaagagtgaagcacagcttcaggaaatccgacgcttgcaccagtac
gtgaagtttgctgttcaggatgtgaatgatgttttggatttggagtgggatcggcacctg
gaacagaagagaaagcagaagcgcctgatagttcctgagcgagagactttgtttaacacc
ctggctaataaccgggaaataatcaatcagcagaggaagagactaaatcagctcgtgaac
agcctgcagcagctccgactgtataatcagacatctcagtggagtgttcccagtgataca
tcctcttttagcaatgctcaaagttttgacagtgaccttgaaagcctgcgcaatgccttg
atgaaaactactttggaatcacatgccaaacctctgcctaaagtacctgctaaattatcc
cccgtgaagcaggcacagttgaggaatttcctggcgaagaggaaaactccaccagttaga
tctacagctccagcaagtttgtcccgatctgccttcttgtccacaagatattatgaagat
ttggatgaagtcagttcaacatcctcagtttcccagtcgctagagaatgatgattcacag
gcagtggaccaagaagaagaggctgctccagtccaagtccctcgtcatgctcctgtagtc
cgtactccctctatccagcctggtttgatggctcagtctccgtcctttgggaaacagcac
ctctccctgggtactttgatgcctacgtcttcaaacagaatcataccacaaggggcagac
agtacaatgcttgccacaaagaccgtgaaacatggggcccctgctcccactgtcactgtc
ccagcaccacaagcagctgctgctgcagctctgcggaggcagatggctaaccagtcccca
gctgtaagcacctccttgactgaatcaactctgaagaacgttcctcaggtggtaaatgtg
cgagaactcaagactggtgcattgactccggctgtctctgctgtaataggatcctctgta
cctcactctgcagcccaggcagtccaccaagttttggcaactgttgctacaaatcaagct
aaacagacgcctctaacaagctcacttaagggacagactccaccttccactgtgtgtgca
ccctgtcctatggcatctacagctggtccaacatcgtctggcaacaaaatctcaggacaa
gggacagtaaaaacagttacagctgtgacatcatctacagtgacatcagtacaagcaaca
actgcacagcttaacaaagcattctcgttttcttctgtggggtctggatttaattttggt
gttgtcacatcagctgcttcatcaccaacactgcccagcctcgcttcctcgcaagcccct
ggtaaagagtccacccagactgattcattttcgcttgctgggggttccaaatttggagta
gtccctgagagctcctttgcttttgggtccctcaagccagcaagtgcttcaggagcctta
gtaggaaatacctcctcagcagatggcacccagtcaaacaaacctgctgcaacaacatct
tctgcttcctccacagcctatggcaagttggatatccctccatctaaaccgggagatctc
ttgtttcagagcaatctagctggggaaactcttgggagcttctcaggactacgggttggc
caggtagatgataatgccaagaccaccgctaaagcaccatctaccagtgctgcaggagca
cagtcaactaaagtatctacaataccttctgggtttacttttggtgctcccctgtcatta
ggaaaagcaggagaagctgcttcaacagcagtcacatcggctggcacggcatccccgtcc
atcagcactagtgccacaggcagtctctttggcaatgtccagctaaccaacaccgggtct
tctggggtatttaatcttggaggctctagtggcaacaaaccgaccttttcgtttggtatt
cagcaagcaaacagtatgagcacatccacctctaccccttctactctctctgcttcaacg
tccctctcatttggaagtttcttgagttcatcacaaactgctgtccctgctgcgacttct
agtaagggtgcaggggatgccaaattaccgtctgtgtcagaaaagccatctgaaaatgaa
tctgtatcagctgggtcttcacctccaatgacgcagtcaccacagccacaagtacagctt
tcagagtccattaaagaacctgcttcaccccaggccacaaccggggacgccgtctctgcg
ggctctagtaccacgttggcagcacctccccctgatgcagttgctactcctgcctccacg
agtgatttgaaggcaccggtgcctcccaccatctctgcgtctgccccgccagatcagaat
gtctcggcaacaacctccacagcaaacattgcctctcctgcagaagccacaagtgcgttg
gctgctacctctgatgttactacatgtgttcagagtccagcagttggtgcctctgtgttt
gctcccacttctgcaggctcctcagtgttctctcagcctccgagttccagctcttccagc
tcagcatttagccagcctgctggtgacacaactgccaccccttccacaccgcctgttttt
ggacaactaccagcaggtaccacagcatcctctccatttgggcaactcaccaccagtacc
ttgtccactgctactgctaccacacaggctgccagctcaggttttggtacttctgctttt
ggcaccaccactactggggggtttggtcagccagccttcggacaagcaccaacctttggg
caaccagcgagcagttcttcaggtggttttacctttagccagtctgggtttgggacgatg
ccggcctttggcnncgcggcttccacagcagcctcgagcagtggcaatgtttttggagcc
ccagctagcaccaacagcgccagctccttttcctttggacagccatctgccagcactgga
ggtgggttgttcggacaaagcagccctccagtgtttgggcagaacactggctttgggcaa
gggggatccgtctttggtagcgctgccgccgttactactacaacgtcatctgctgggttc
agcttctgccaagcttcaggttttggttctagtaacacaggttctgtgtttgggcaagca
gctaatactggaggcaccgtcttcggccagcagccatcatcttccagcggaggcttgttt
ggagctggaagtggtgggagagatggaggcttcttcagtggtttgggaggaaagccaagt
caggatgcagccaataagaatcccttcagttcctccagtggaggatttggatctgcagct
tcacagaattcttctagcttatttggaaacagcggagcaaagacttttggattcggcagc
tcatcgtttggagaacagaagcccacgggcactttcagctctggtggtggaagtgtggca
tctcaaggctttgggttctccagtccaaacaaagcaggtggcttcggtgctgctccagtg
tttggcagccctcccacttttgggggatcccctgggttcggaggggtgccagcattcggt
tcagccccaaccttttcaagccctctgggctcaacgggaggcaaagtgttcggcgagggt
acagctgcagccagcgctggaggatttgggtttggtggtaccagtaacaatacagcgtca
tttggcacactagcaaatcaaaataccccgacatttggatcgctgtcgcaacagggtacc
ggtttcggcacacaaagcagtggattctcagcttttgggacaggtggaggagggtttggt
tttggatcatctaacacatcttcctctggatttagtggatggagaagctaa
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integrated database retrieval system
