Phalacrocorax carbo (great cormorant): 104048123
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Entry
104048123 CDS
T08596
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03022
Basal transcription factors
pcao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104048123 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
104048123 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104048123 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104048123 (GTF2H1)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104048123 (GTF2H1)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104048123 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
104048123
NCBI-ProteinID:
XP_009506831
UniProt:
A0A093TFI5
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKTMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKTARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPMKKVKLQESIEY
EDLAKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYIPKLTQ
VLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcatctgaagaagtgttactgatcgtaaagaaggtacgtcagaagaagcag
gatggagcgctctaccttatggctgaaaggatagcatgggcacccgaaggcaaagaccga
ttcacagtcagccatatgtatgcagacataaaatgtcagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggaacgagatgcggtaaaggatcttcttcaacaactgttg
cccaagttcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatctctgcagcatttctggctgatgtacgtcctcaaacagatggctgc
aatggtctgaggtataatttgacttcagatatcattgaatccatatttcgaacataccct
gcagtgaaaatgaaatatgcagaaaatgttccacataacatgaccgaaagggaattctgg
acacgattttttcagtctcattatttccatcgggacaggctcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgaaaaagggttaaaaacaatggtgtctcaagga
gtaaaaaaccctctgatagatttgacagctttggaagataaaacattagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaaaacagctagagaaagtagcaat
gctgccattataaaacgctttaatcatcacagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcaaccaccaatgaaaaaggtgaaactgcaggagtccattgaatat
gaagatttagcaaagaataatagcattaaaactattgcactaaacttaaagaagtctgat
aggtattatcacggtccgactccaattcaatcacagcaatatgcaaccagtcaggatata
attaattcttttcatagtattaggcaagaaatggaagcatatatacccaaactaactcag
gttctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacgttcagtctgaa
ttaaaacacttgtacgtggcagtaggggaactgctacgacacttctggtcctgctttcct
gttaacacaccattcctagaagaaaaggttgtgaaaatgaggagtaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaac
ttggtaagtcatatagaagagatgctgcagacggcctacaataagttccatacatggcag
tcccggcgtatgctgaagaagacgtga
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