Phalacrocorax carbo (great cormorant): 104048164
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Entry
104048164 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104048164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcao02000
]
104048164
Transporters [BR:
pcao02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104048164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_22
AAA_23
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
104048164
NCBI-ProteinID:
XP_009506875
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
YIREGFLAVQHAVDRAIMQYHANTSSSSLLENITVVVQRFPYPAYVNDLFLLAIQNQLPL
LLMLSFTYTSLNIVRAVVHEKEKKLKEYMHMMGLSNWLHWSAWFLMFFLFLLVSVFFVTV
LFCVKVSEQGAVLTNSDPTLVFTFLAIFSISSISFNFMVSTFFSRANVAAGPGGFLYFFS
YIPYFFISPRYDLMSHSQKLASCLISNVAMAMGAQLIGMFEGKGTGIQWRDLMKPISVDD
NFTLAQVLGMLLLDSVLYGVVAWYVEAVFPGEYGVPQPWYFFLTPSYWCGRPRTVVGKEK
EEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVFKVGNKKKEAVKDLTVNMYEGQITVL
LGHNGAGKTTTLSMLTGLHSPTDGQAYINGYEISQDMVLIRRSLGLCPQHDVLFDNMTVE
EHLRFYAGLKGYPPSKCPEEINHILRILNLEDKRHSLTKALSGGMKRKLSIGIALIGDSK
VVMLDEPTSGMDPASRRATWDLLQQQRSNRTILLTTHFMDEADLLGDRIAIMAKGELQCC
GSSLFLKRKYGAGYHMVMVKEPYCNLGEISRLICQYVPNATLESNAGAELSFILPKESTH
RFEALFTELEQKREELGIASYGASVTTMEEVFLRVGKLVDSSMDIQAIQLPALQYQHERR
SNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKLNTGFYLCCQQFYAMFMKRAMYSWRN
WKMVAAQFLVPLIFTAFALIVAKTFPGPRDSSLLRLTLEPYGQTIVPFFISATSGLSQRL
AEQYVELLDAQRQSPLEVLGEGSRSTRGADDTQWGTQEPRSSLGARNRTVVTALFNNQAY
HSPATALMLADNAVFRVLAGPNASITVTNYPQPRNITEKAKDQLMEGQTGFAIAINLLYG
MASLASTFALLLVSERAIKAKHVQFVSGVYVVNFWLSALLWDIINFLIPCALMLVIFQAF
NVQAFTQDSHLVDVMLIFLLYGWAIIPLMYLLSFFFRSXAPAYPRLTIFNILSGTATFLA
VTIMSIPELGLVDLSKTLDKVFLVLPNYCLGQCISDFYQNYEFIQFCTSSVEAIFICKAF
SESLLDFVPFHSTPGIGRYLTSLTIQGFSFLFLLFLIETNLLWRLRTLVCGICRRRKWVA
LLNRVSVLPEDRDVADERKKVLESPPELLSSLSSPLVIKELTKVYDSRESLLAVDRISLA
VSKGECFGLLGFNGAGKTTTFKMLTGDESITSGDAFVDGHSILANIKKVQQRIGYCPQFD
ALLDHMTGRETLSMYARLRGIPERYISSCVENMLRGLLLEPHADKLVRTYSGGNKRKLSA
GIALIGGPPVIFLDEPSTGMDPVARRLLWDAVTRTRECGKSIIFTSHSMEECEALCTRLA
IMVNGQFKCLGSPQHLKSKFGSGYTLLAKTRSEEEGELQAFKAFVEKTFPGSVLKHEHQG
MVHYHLTNKNLSWAQ
NT seq
4367 nt
NT seq
+upstream
nt +downstream
nt
gctatatccgagaaggtttcctggcggtgcagcacgcggtggacagagccatcatgcagt
accatgccaacaccagctcctccagcctgctggagaacatcacggtggtggtgcagcgct
tcccctacccggcgtatgtcaatgacctctttctcctcgccattcagaaccagctgcccc
tgctgctcatgctcagcttcacctacacctcgctcaacatcgtccgcgccgtcgtgcatg
agaaggagaagaagctgaaggagtacatgcacatgatgggcctcagcaactggctgcact
ggagcgcctggttcctcatgttcttccttttcctcctggtgtccgtgtttttcgtcactg
tgctcttctgtgtcaaggtgagcgaacagggagcggtgctcaccaacagtgaccccacgc
tggtgttcaccttcctcgccatcttctccatctcctccatctccttcaacttcatggtga
gcaccttcttctcgagagcaaatgttgcggctggcccgggcggcttcctctactttttct
cctacatcccttacttcttcatctcgccccgctatgacctgatgtcccacagccagaagc
tggcgtcctgcctcatctctaatgtggccatggccatgggggcacagcttataggcatgt
ttgaaggaaaagggactggcattcagtggagggacctcatgaagcccatcagtgtggatg
acaactttaccttagcccaagtcctcgggatgctgctcctggactcagtgctctatggtg
tggtggcctggtacgtggaggctgtcttcccaggggagtacggcgtgcctcagccatggt
acttcttcttgacgccctcatactggtgcgggcgccccaggactgtcgtgggaaaagaga
aggaggaggaggaggaccctgagaaagcgctgaagagccagtacattgaggaggaacctg
ccgacctcgtgtcgggaatcaaaataaagcacctttccaaggtgttcaaagtgggaaaca
agaagaaagaggcagtcaaggacttaacggtgaacatgtacgaagggcagatcaccgtcc
tgttgggacacaatggtgctgggaagaccaccactctgtccatgctcacaggtctgcact
cgccaacggacgggcaggcatacatcaatggctacgagatctcccaggacatggtcctga
tccgccgcagcctgggcctatgtccccagcatgacgtcctctttgacaacatgacagtgg
aagagcacctccgcttctatgcagggctgaaggggtacccaccctccaagtgccccgagg
agatcaaccacatcctgaggatcctcaacctggaggacaagcgccactctctcaccaagg
cgctctctggtggcatgaagcgcaagctgtccattggcatcgccctcattggggactcca
aggtggtgatgctggatgagccgacgtcagggatggacccagcctctcgcagggccacat
gggacctcctgcagcagcagaggagcaaccgtaccatcctgctgaccacccacttcatgg
atgaggctgacctgctgggggaccgcatagctatcatggccaagggcgagctgcagtgct
gtggctcctcactcttcctcaagcgtaaatacggggcaggatatcacatggtgatggtga
aggagccctactgtaacctgggggagatctcccgcctcatctgtcagtacgtgcccaatg
ccaccctggaaagcaatgccggggcagagctgtctttcatcctgcccaaggagagcacac
acaggtttgaggccctgttcacagagctggagcagaagcgggaggagctgggcatcgcca
gctacggcgcctcggtcaccactatggaggaagtcttcctgagggttgggaagcttgtgg
actccagcatggatatccaggccatccagctgcctgctctccagtaccagcatgagagac
gctccaatgactgggccatggatgactccagcagtctgagtggcatgacagatatgacgg
acgacagcggggcactcattacagaggactgctccagcatcaagctcaacactgggttct
acctgtgctgtcagcagttctacgccatgttcatgaaacgagccatgtacagctggcgca
actggaagatggtggcagcgcagttccttgtgcctctcatcttcactgcctttgccctca
tcgtggccaagaccttcccgggacccagggactcctccctgctgaggctgacactggagc
cctatggccagaccatcgtgcctttcttcatctcggccacctcgggtctgtcgcagaggt
tggcagagcagtacgtggagctgctggatgcccagcgtcagtcaccgctggaggtgctgg
gtgagggttcacggagcacccgtggagcagatgatacccagtggggcacgcaggagccac
ggtcttctcttggagccaggaaccgcacggtggtcactgcgctcttcaacaaccaggcat
atcactcccctgccacggcccttatgctggctgacaacgctgtcttcagggtactggcag
gccccaacgcctccatcacagtcaccaactaccctcagccccgcaacatcaccgagaagg
ccaaagatcagctcatggaaggccagactgggttcgccattgccatcaacttgctgtatg
gcatggcctcactcgccagcaccttcgctctgctgctggtcagtgagcgggccatcaaag
ccaagcatgtccagtttgtcagtggcgtctatgtggtcaacttctggctttctgccctgc
tctgggacatcatcaacttcctcatcccttgtgctctgatgctggtgatattccaagcct
tcaatgtgcaagccttcacccaagacagccacctcgttgatgtgatgctgatcttcctcc
tctatggctgggccatcatccccctcatgtacctcctcagcttcttcttcaggtccnnag
ccccagcctacccccgtctcaccatcttcaacatcctctcaggcacggccaccttccttg
cggtcaccatcatgagcatcccagagcttggcttggtagacctctccaaaaccctggata
aagtctttctcgtcttacccaattactgcttgggccaatgcatcagtgacttctaccaga
attatgagttcattcagttttgtacctcctcggttgaagccatcttcatctgcaaagcgt
tcagtgagtctcttcttgattttgttccattccattccacgcctggaatcggacgatacc
tgacctccttgaccatccagggtttctccttcctcttccttcttttcctcattgagacaa
acctcctctggagactgagaactttggtctgtggcatctgcaggcggcggaaatgggtgg
cactgctgaacagggtatctgtgctgccagaggaccgggacgtggcagatgagaggaaga
aggttttggagtcaccaccagaactgctgtcatctctcagcagccctttggtcatcaagg
agctcaccaaggtctatgacagccgggagtccctgctggcagtggacaggatatccttag
cagtcagcaaaggggaatgctttggccttcttggcttcaatggagcaggcaaaaccacca
ccttcaagatgctgactggtgacgagagcatcacgtcgggggatgcctttgtggatggcc
acagcattctggccaacattaagaaggtccagcagcggatcggctactgcccacagttcg
atgccctcctggaccacatgacaggccgcgagaccctgagcatgtatgcccggctgcggg
gcatccccgagcgctacatcagcagctgtgtggagaacatgctgagagggctgctcctgg
agccccacgctgacaagctcgtgagaacttacagcggtggtaacaagcggaagctgagtg
ctggtattgccctcatcggtggtccccccgtgatcttcctggatgagccttccactggca
tggaccccgtggcccgacgtttgctctgggacgcagtgacacggacgcgggagtgtggaa
aatccatcatcttcacctcccacagcatggaggagtgcgaggccctgtgcacgcggctgg
ccatcatggtgaatgggcagttcaaatgcctgggcagcccccagcacctgaaaagcaagt
ttggcagcggctacacattgctggccaaaacgcggagtgaggaggagggtgagctgcagg
ccttcaaggccttcgtggaaaagactttcccaggcagtgtcctgaaacacgagcaccagg
gcatggtgcattatcacttgaccaacaagaacctcagttgggcacag
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