Phalacrocorax carbo (great cormorant): 104048255
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Entry
104048255 CDS
T08596
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104048255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104048255
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104048255
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
HECT type E3
104048255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
104048255
NCBI-ProteinID:
XP_009506997
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MLCWGYSAFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGITT
IEDAVMVPRLIKKLNQQTILQVSCGNWHCMALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGRNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINEKRYTCLINDETIDVWRQKLLEKNSS
NSVKVNKKQQELVNRLIKFLPLRACCKKGRLAACWNGSFLEKKIDEHFKTSPKIPGIDLN
STRVLFEKLMNSQHSILLDQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKY
YITLTLPLAMAILRLDTNPSKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPV
LFSSYITAALRLLEKLHKVNQKVRHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRP
SIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPF
LVLHVRRSNLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNP
IYGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVK
PCLEDLKELSPTEGRSLQQLLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKILV
QKDNREEFVEAYVNYVFNLSIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYN
WEELEESAVYKGDYTATHPTVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIV
IQSTASGEQYLPVAHTCYNLLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggatactcggcttttggacaacctgggataggtagcaacctccaggtc
attattcctgaaccacaggtgtatggattcattcatgacagaaatgtcaaggaggtggca
tgtggaggaaaccactctgtgttcctgttggaagatggggaagtgtatacttgtggcttg
aacactaaaggccaactggggcatgactgtgaaggaagcaagccagagcaaatcggagct
ctggctgggcagcacatcgtgcacgtggcctgtggagagtctcacagcgtggcactcagc
gaccagggccagctcttctcctggggtgccggcagcgatggacagttgggcattaccacg
atagaagacgcggtgatggtaccaaggttgataaagaagctgaaccaacagacaatactg
caggtttcctgtggaaattggcattgcatggctttggcagcagatggccagttcttcaca
tgggggcagaacagctatggtcagctgggcttgggtaaagaatgtccctcccaagccagt
ccacaacgtgtcaagtctcttgatgggatccctttggctcaggttgctgcaggcggagcc
cacagctttgccctctctctctcaggagctgtgtttggctgggggaggaacagctcagga
cagctgggactaagtgatgaacgagaccgagaatccccttgtcatgtgaagctgctgcgg
tctcagaaggttgtttacatcagctgtggtgaagaacacacagcagttctgacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgtggacaactgggacatgactccatgaat
gatgaagtgaacccccgaagagttcttgagctaatgggcagtgaagtatcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacggggcacacttgcaatgttaagtgtccctctcct
gtcaagggtcactgggcagctcacaatggtcaactctcagggaaacctgatgcctgcaaa
tatcacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgctccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaaagcgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaaagttaataaaaagcagcaagaacttgtgaacagactgattaaattcctt
cccctgcgtgcctgctgcaagaaaggcagactagctgcctgctggaacggaagcttcctg
gagaagaaaattgatgaacattttaaaaccagtccgaagatcccagggattgatctgaac
tccaccagagtgctgtttgagaagctgatgaactctcagcactccattcttctagaccag
atactgaagagctttgaaagttttttgattcctcagctgtctagctcaccaccagatgtc
gaggcaatgaggatctatctgattctccctgaattcccaccttttcaagactcaaagtat
tatatcacattaacacttcctctggcaatggctattctgcgcctagataccaaccccagc
aaagttcttgataactggtggtctcaagtgtgcccaagatacttcctcaggctagtggac
ctctataaaggtgcagttgtttacctcctcagtggaagaaagacactgttgatcccagtc
ctgttcagtagctacattacagctgctctcagacttctggagaaactccacaaggtaaat
cagaaggtgagacacatagaatatgataagttttatatccctgagatttccagcttggtg
gacattcaggaggattatctcatgtggttcttgcatcaggctggaatgaaagtaagacca
tctatcatgcaggatgctgtgacactctgttcttatcctttcatctttgatgctcaggct
aagaccaagatgttacagacagatgcagaactacagatgcaggttgcaataaatggtgca
aatttgcagaatgtcttcatgcttctcaccctggagcctttactggccagaagccctttc
ctggtacttcatgttcgcaggagtaacttagtcggcgatgctttaagggagttgagcatc
cattcagatattgatttgaaaaagcctcttaaagtcatctttgatggtgaggaagctgtt
gatgctggaggagtgacaaaggaatttttcctcctgttattaaaagaactcctcaacccc
atctatggcatgtttacttactacccagagtcaaacctgctgtggttttcagacacgtgt
tttgtagaacacaactggtttcacctgattggcatcatatgtggtcttgcaatatacaac
ttcacagtggtagaccttcactttcctttggctctgtacaaaaaactcttgaatgtgaag
ccctgcctagaggatttgaaggagctatcccctacagaaggaaggagtcttcagcaactt
ttagattaccctggggaagatgtagaggagacattctgcttgaattttacaatctgcagg
gaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaattctggtg
cagaaggacaacagggaagaatttgttgaagcctacgtaaattacgtcttcaacctctcc
atccatgagtggtacacagccttttccactggcttcctgaaagtgtgtggtgggaaagtc
ctggaactcttccagcccacagaactcagggccatgatagttggaaacagtaactacaac
tgggaggaactggaggagagcgctgtctataagggagactacactgcgacacacccaact
gtgagaatgttttgggaaacctttcatgcatttcccttggaaaagaagaagaaatttctc
ttgtttctgacaggcagtgaccgcattcccatctacggcatgtccagcctgcgcatcgtc
atccagtccactgccagcggggagcagtacctgcctgtggcacatacctgctacaatctc
ctggacctgcccaagtacagcagcaaggagatcctcagcgcccggttggtgcaagccatc
gatcactacgagggctttagcttagcttga
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integrated database retrieval system
