Phalacrocorax carbo (great cormorant): 104048448
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Entry
104048448 CDS
T08596
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104048448 (SCAF4)
03041 Spliceosome [BR:
pcao03041
]
104048448 (SCAF4)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104048448 (SCAF4)
Spliceosome [BR:
pcao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104048448 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104048448
NCBI-ProteinID:
XP_009507217
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSATAPMTENATNNEGSPPPPAKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKSTAAQPPEQKAAFAPPEQKT
SFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPALTPLSFSAQAGWCSIPGGFPGEG
IQQPVFPQLANMDPFQQRMMGMQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMTQPVIPP
TAPVQQTFQSPFPVQSESHMQKPHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRR
RSRSGSRSRRSRHRRSRSRSRDRRRHTHPNRIEVNYTAFYFLNSCKAVCSTTLWVGQLDK
RTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKI
AWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKA
ENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPP
AFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPHTPAV
NIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYATVPPPVAPTNVPAPV
TQAIPLLGTQGVAPPPPAPVVGFPPPGHFVRPGGMPGSGGPGGPEDNRDGRQFRNDRQTF
TPNRDQERFGRRSFGNRVENDRERYGNRNDDRDHERLGNRDRRDWGRRSPERDRHRDLED
RNRRSSGHRDRERDSRDRESRRDKEENRGKEKPELTDRSDGDKNHESHSGKMEDADIVSE
LAAGESEPAGVKPVEELPSEATSSVEQAEKDMGSVAEAPR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaaacctcctatttcccgagcaaaaatgattctcatcacaaaagctgccatt
aaagctattaagctctacaagcatgttgtccagattgtagagaagtttatcaaaaagtgc
aaaccggaatataaagtccctggactgtacgttatcgactctattgttcgtcagtctcgt
caccagtttggaacggacaaagatgtttttgggccaagattctctaaaaatattactgcc
acattccagtatttgtatctttgtccatctgaagataagagtaaaatagtccgtgtcctg
aacctttggcagaaaaatggagtatttaaaattgaaataattcaacctcttctggatatg
gcagcaggaactagtgccactgcaccaatgacagaaaatgctactaataatgaaggttcg
ccaccccctccagcaaaggttccttcggagcccccgcaagttactgctaactcagtacct
actgtgccacagttgcccagttctgatgcctttgcagctgtagctcagttgtttcaaaca
acgcaaggacaacagcttcagcaaattcttcagacttttcaacagcctcaaaaaccccag
tcacccgtcatagataacactgtgatggctcaggttcaagctattactgctcagttgaaa
agtacagcagcacaaccaccagaacaaaaagctgctttcgcaccgcctgagcaaaaaacg
tcatttgacaaaaagctgctagatcggtttgactatgatgatgagccagaagcagtggaa
gattcaaagaaagaagattcagctccttctccttcagtttctcagccagctttgacccct
ctctcattcagtgcacaggctggatggtgctcaatacctggtggatttccaggagaaggt
atacaacagccagtatttcctcaacttgcaaatatggatccctttcagcagcgaatgatg
ggaatgcagcaggatccaatgcgtcaccaggttccgcttcctcctaatgggcaaatgcca
ggttttggtctcctgcctaccccacagtttccacccatgactcaacctgtgattccacca
acagcacctgtgcagcaaacttttcagtctccttttccagtacagagtgaatcacacatg
caaaaaccacatcagcaggatatggaagtggaacagccacctattcaagagggaaaacgg
catgtttctgacaacagaaagtcaagatctagatctgcgtcaaggtcaccgaaaaggaga
cgttcaagatctggctcccgatcgcgaaggtcacgtcatcgtcgatctcgatctcggtcc
agggatagacgccgacacactcatccaaacagaatagaagttaactatactgcgttttat
tttttgaacagttgtaaagctgtttgtagtactacgctttgggtaggacagcttgacaaa
aggacaactcaacaggatgttggaagtcttttggaggagtttggcccaattgaatcaata
aatatgataccgcctagaggatgtgcctatattgtaatggttcacagacaagatgcttat
cgtgccctacaaaaactgagccgaggaaacttcaaagtcaaccagaaatctataaagatt
gcatgggctttgaataaaggaataaagccagattacaagcagtattgggatgtagaatta
ggtgttacttacataccatgggacaaagtgaaacctgaagatcttgaaagtttctgtgaa
ggaggaatgttggacaacgaaactcttagcccagagtggaaggggattcctaagaaggca
gaaaatgaagtagctcaaaatggaggtgcagaagctacacataatgaaccagtgtcacct
atacctaaagctttacctgttccaattcctgttcccatgcctgcaccaataacagtacct
cctccacaggttccaccacatccgtcaggtcctcctgtggttggagcactccaaccacct
gctttcacagcacctttaggaatcccacctcctggatttgctcccggagtgccaccaccg
ccaccacctccatttttacgacctggtttcaacccgatgcatttaccgccaggttttctt
cctcctggaccgccaccgcctataactcctccagtttctgttcctcacactccagcagta
aacatcccaaattctacagcaactggtgtgaatgaagacactacaaaagattcatctgta
ggaaatcccatcccaacagtggtttctggatccagagggaatgctgaaactaccgatagt
tccaaaatatatgcgactgttccacctcctgtagcacctactaatgtacctgctcctgtc
acccaggctattccacttcttggcactcaaggagttgcaccgcccccaccagcccccgtt
gttggcttcccgccgccgggtcacttcgtgagacctggggggatgccgggaagcgggggc
ccaggcggacccgaggacaacagagacgggaggcagtttaggaacgacaggcagacattc
acgcctaacagagaccaggagaggtttggaaggaggtcttttggaaatcgggtagaaaac
gatcgtgagcgctatggtaaccgcaacgatgacagagatcacgagcgactcggtaatcgt
gacaggcgagactggggacgaagaagccccgagcgcgacagacacagagacttggaggac
agaaacaggcggtccagcggccatcgagacagagagagagattcgcgagacagggagtct
cgcagagacaaggaagaaaatcgagggaaggagaaaccggagctgacagacaggtccgat
ggcgacaaaaaccacgagtctcacagcggcaaaatggaagatgcagacattgtttccgaa
cttgctgcgggagagtctgaacctgcgggtgtaaaacctgttgaagagttaccatccgag
gctacctcatctgtggaacaagcggaaaaggatatgggctcagtggcggaggctccgcgc
tag
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integrated database retrieval system
