Phalacrocorax carbo (great cormorant): 104048476
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Entry
104048476 CDS
T08596
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104048476 (BTAF1)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104048476 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_2
TPR_Trm732_C
Vac14_Fab1_bd
ARM_ECM29
Cnd1
Rac1
Motif
Other DBs
NCBI-GeneID:
104048476
NCBI-ProteinID:
XP_009507248
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
LDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRIAAGQA
VEAIVKNVPEWNPTPRSKQEPGSESPMEDSPSTDRLRFDRFDICRLLKHGASLLGSAGAE
FEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSSVSLAN
KQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDGEPEEK
RRKVANVVINQPATDSKTLVENSPEEANEWPLESFCEEVCNDLFNPSWEVRHGAGTGLRE
ILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAPVRETC
AQTLGVVLKHMNETGVHKTVDVLLKLLAQEQWEVRHGGLLGIKYALAVRQDMINTLLPKV
LPAIIEGLQDLDDDVRAVAAASLVPVVESLVQLQSQKVPFILNTLWDALLELDDLTASTN
SIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLSTQDQS
SSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPWMGAWL
CLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQGQTQNKEVIQEYIAGTDSIAEDPATRD
YVVMRARMMAAKLLGALCCCICDPGVNTVTQEIKPAESLAQLLLFHLNSKSALQRISVAL
VICEWAALQKECRTVAICVQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLADAHID
IGNRVNCSVFTIDQANELVTSVFNEVTSSFTLNPKTLQQLDSKRQQVQMTVTETNQEWQV
LHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIKKEENTLVQNYVASCIAKLLQQCTAR
SPCPNSKIVKNLCNSLCVDPHLTPLAACPAQPQSSHENSKGPNSDKDGMHHTVTKHRGII
TLYRHQKAAFAITSRRGPTPKAPKAPIADLPTGSSGSIPTELDEAQKPYVVQRRGAEFAL
STIAKHFGAEMATGLPHLWDAMVGSLMSNIHINNFDRKSLLEKGDAPAQELVNSLQVFET
TAASMDTQLHPL
NT seq
3277 nt
NT seq
+upstream
nt +downstream
nt
gcttgatcgtctctttattttactggacaccggtacaactccagtaacaagaaaagcagc
tgctcagcaacttggggaagtagtgaaactgcatcctcatgaactgaataatctcttatc
taaagtgttagtgtatttaagaagtacaaattgggatactcgtattgcagctggccaggc
tgttgaagcaatagtgaaaaatgtacctgagtggaatccaactccaagatcaaaacaaga
accaggctcagaaagtcctatggaagattcaccttcaacagatcggttacgttttgacag
atttgatatatgtcggttgttaaaacatggtgcatctcttcttggatctgctggtgcaga
atttgaagtccaagatgataaatcaggtgaaattgatcctaaagaaaggatagcacgaca
gaggaagctgttacaaaagaaacttggcttagatatgggtgctgcaattgggatgaatac
tgaagatctgttcaatgatgaagatctggactattcaccttcctcagtttcactagcaaa
caaacaacctactcttcaggctgctgagttaattgactcagaatttcgagctggtatgag
cagtagacaaaagaataaagcgaaaagaatggctaagctgtttgcaaagcaacgatccag
agatgcagtggaagctaatgagaagagcaatgatagtactgatggggaaccagaagaaaa
gagaagaaaagttgcaaatgttgtcatcaaccagcctgccacagactcaaaaacattagt
agaaaattctccagaagaggcaaatgaatggcctctggaaagcttttgtgaagaggtgtg
caatgatctctttaacccttcttgggaggttcgacatggtgcaggtactggactgagaga
gatacttaaagctcatggtaaaagtggtggtaaaatgggagatagctctttagaagagat
gattcagcagcatcaggagtggctagaagacttggttattagacttctttgtgtgtttgc
attagacagatttggggactttgtttcagatgaagtggtagcaccagtgcgtgagacttg
tgctcagactttgggagtagtattgaaacatatgaatgagactggagttcataaaactgt
ggatgttctcctgaagctgctcgcacaggaacagtgggaagtgagacatggtggtctcct
aggaataaaatacgctttggcagtacgtcaggacatgatcaacactttattgcctaaagt
gttgcctgcaataattgaaggtctgcaagatctggatgatgatgtccgagctgttgctgc
agcatctttagtaccagtagtggaaagcctggtccaacttcagtctcagaaggtgccttt
tattctgaataccttgtgggatgcacttctggaattggatgacttgacagcttccacaaa
cagtatcatgatccttctttcttcccttctgacttatcctcaggtccgcaaatgcagtat
tcagcaatcactcacagttttggtcccacgcgtgtggccattcttgcatcatactatatc
atctgtgcgaaaagcagcactggaaacattattcacactgctgtctacccaagaccagag
ctcttcaacatggctgactcccattctgcaagacatgttaaggcacatatttcaattttg
tatcttagaaagcaaccaagaaattctggatcttattcacaaggtatggctggaactgtt
gaacaaggcatctgtacagtatgtggttgcagctgcttgtccgtggatgggagcctggct
ctgcttaatgatgcagccatctcatttgcccattgacttaaacatgttgctagaagtaaa
aaccagatcaaaagaaaaggcaggtgctaaacttcgtcaaggtcaaacccagaataagga
agtgattcaggaatacattgctgggacagacagcattgcagaagatccggcaacaaggga
ttatgttgtcatgcgagctcggatgatggcagcaaagttgctgggagcactttgctgctg
catttgtgacccaggtgtaaatactgttactcaagaaataaagccagctgaatcattagc
tcagctactgctcttccacttgaattctaaatctgccttgcagaggattagtgttgcatt
agtaatatgtgagtgggcagccttgcaaaaggagtgtagaactgtggccatttgtgtgca
acctcgtttacttggggtcctttctgaacatctctattacgatgaaattgctgttccttt
tacgcgaatgcagaatgaatgtaaacaactcatctccttgttagctgatgcacacattga
catcggaaacagagtaaactgcagtgtatttacaatagatcaagctaatgagctggttac
ttctgttttcaatgaagtgacatcatcctttactttgaatccgaaaactctacaacagtt
ggacagtaaacgacagcaagtccaaatgactgttacagaaacaaaccaagaatggcaagt
gttgcatctgcgagtccatacatttgctgcatgtgcagttgtgaacttgcagcaacttcc
agaaaagctaaatcccgttataaagcccttgatggaagctatcaaaaaagaggagaatac
acttgtacaaaactatgtggcttcatgtatagcaaagttacttcagcagtgtacagcgag
gtctccttgtcccaactcaaagattgtaaagaatctctgcaactccctctgtgtggatcc
gcatcttaccccactagcagcatgtcctgcacagcctcagagtagccatgaaaactcaaa
agggcccaactctgataaggatgggatgcatcatacagttactaagcacaggggaataat
tacactgtacagacatcagaaagctgcttttgccatcacaagtcggcgaggtcctactcc
aaaagctccaaaagcaccaattgcagatctccccactggcagtagtggaagcattcctac
agaacttgatgaggctcagaaaccttatgtcgtacagagaagaggagctgaatttgcctt
atctactatagctaaacattttggtgctgaaatggcaacgggattgccacatctctggga
tgctatggttggttcattaatgagcaacattcacataaataactttgaccgaaagtcctt
actggaaaaaggggatgctcctgcccaggagctggtaaattccttacaggtttttgaaac
aacagcagcttcaatggatactcagctacatcctctg
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integrated database retrieval system
