Phalacrocorax carbo (great cormorant): 104048531
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Entry
104048531 CDS
T08596
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104048531 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104048531 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcao04812
]
104048531 (VIM)
04147 Exosome [BR:
pcao04147
]
104048531 (VIM)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104048531 (VIM)
Cytoskeleton proteins [BR:
pcao04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
104048531 (VIM)
Exosome [BR:
pcao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104048531 (VIM)
Exosomal proteins of other cancer cells
104048531 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF1664
TolA_bind_tri
Phage_GP20
DUF7491
DUF4200
DUF4515
DUF1759
BLOC1_2
LAMB4
2_5_RNA_ligase2
RBD-FIP
TPR_MLP1_2
T2SSF
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
104048531
NCBI-ProteinID:
XP_009507316
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
GPPLPPHRCLAPSRLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIVFL
KKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSK
FADLSEAANRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEENFAVE
AANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRINMP
IPTFASLNLRETNIESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gggcccccgctccctcctcaccgatgtctcgccccttccaggttgcaagaggagatgctt
cagcgggaggaggccgagaacaccctgcagtccttcagacaggatgttgacaatgcctct
ctggcacgtcttgatctggagcgcaaagttgagtccctgcaagaggagattgtcttcttg
aagaagcttcatgatgaggaaatccgagaattgcaggcccaactccaggaacagcacatc
caaattgatatggatgtttctaagcctgatcttactgctgccctgcgtgatgttcgccaa
cagtatgaaagcgttgctgctaagaatcttcaggaagctgaagagtggtacaagtccaaa
tttgcagatctctctgaagctgctaataggaacaacgatgccctgcgccaggccaaacaa
gaagctaatgaataccgcagacagattcagtctctcacctgcgaagttgatgcccttaag
ggaagcaatgaatccctggagcgccagatgcgtgaaatggaggagaactttgctgttgaa
gctgctaactaccaagacactattggccgtctgcaggatgagattcaaaacatgaaggaa
gaaatggctcgccatctccgcgagtaccaggacctgctgaatgtaaagatggctcttgat
attgagattgccacctacagaaaactgctggagggtgaagagagcaggattaacatgccc
attccaacctttgcttctttgaatctgagagaaaccaacattgagtctcagccaatggtt
gacactcactcaaagaggacacttctaattaagactgttgaaactagagatggacaggtt
attaatgaaacttcccagcatcatgatgacttggagtaa
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