Phalacrocorax carbo (great cormorant): 104048560
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Entry
104048560 CDS
T08596
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104048560 (ZC3H12B)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104048560 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104048560
NCBI-ProteinID:
XP_009507348
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQEAGECSAESEEWTSSESEPEQPYFRSSCSSTQWRE
KEVSTKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQ
IQAVLNKLGADALINDVLAELVRLGNKSESEGQSSTSSTASTLVPRGPCPKEIASPELSL
EDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSS
KGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLSVARKSEASSVPSLVSALSVPTLPPPKS
HAAGALNTRSASSPVPGSSQFMHQKSSLEHMSSVQYPPILVTNSHGTSVSYADQYPKYES
LGDHGYYSLLSDFSNLSISSIRNTDYYGADMDQGMYSRNPSPCPDNCLSHTSNDSYSSYN
DLYLGVADASPEDNVKIHRLPSQNRLQPFSHGYHEALNRVQSYGAEEPKQSLRKQSVSHL
GLHAQHPVVGARSSCPEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPP
LCREQHASWDPLPCASDSYAYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICG
EPREPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaacgtggaacaagaggctggagaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgaacctgagcaaccgtacttcagaagcagctgtagtagtactcagtggagagaa
aaggaggtttccactaaaccacatcggccactctgtcggtccccttgtttggatcgccca
agtttttcacagagcagtatcacacaagacttgaagctagacgaatgcaaaacaaatttg
gacaaggaataccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcag
atccaggctgtactgaataaattgggagcagatgcgctcatcaatgatgttctggcagag
cttgtgagacttggcaacaaaagtgaatcagagggacaaagcagtaccagcagtaccgct
agtactctggtgccaagagggccttgcccaaaggaaatagcaagccctgaattgtcactt
gaagatgaagttgtggataacagtgataacttgaggccaattgtcattgatggaagcaat
gtggctatgagccatgggaacaaagagggattttcctgtcggggaattcaactagctgtt
gattggtttctggaaaaaggacacaaagatatcaccgtgtttgtacctgcatggagaaaa
gaacagtctcgacctgatgcaccaatcacagatcaagaaatcttacgtaaattggagaag
gaaaaaattcttgttttcaccccatctcgaagagttcagggaagaagagtagtttgctat
gatgatcgattcatagtaaaacttgcttttgactcagatggcatcattgtatccaacgac
aactatcgggatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcggctg
ctaatgtattcttttgtgaatgacaaatttatgccccctgatgatcctttaggacgccat
ggcccaagccttgaaaatttcttaaggaaaaggccagttattcctgaacataagaaacaa
ccgtgtccttatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaa
cgggcaaaccagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatct
gctgtgaaaactatgagtgagggagccttggccaaatgtggcacagggccatccagctcc
aaaggagaaatcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagc
attagatcagtagctgtggagcctgaggaaaagttatcagtagcccggaagtctgaggcc
agctctgtcccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagc
catgcagctggtgcattaaatactcgttctgcaagcagcccggtgccaggttcctcacag
ttcatgcatcagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatacta
gtcaccaatagccatggcacctcagttagctatgctgaccagtatcccaaatatgaatca
ttgggggaccatggctattattccttactcagtgatttctccaacttgagcataagtagt
attcgtaacacagattattacggggctgatatggaccaggggatgtattctagaaaccca
agcccctgtcctgacaattgcttaagccatacaagtaatgattcttattcctcttacaat
gacttgtatctgggtgtagcagatgccagtccagaagacaatgtgaagatccacagacta
ccatcgcaaaatcgtcttcagcctttttcccatggttaccatgaagccttaaatagagtt
cagagttatggagctgaagagcctaagcaatcccttcgcaaacagtcagtttcccactta
ggcctacatgcccagcatccagttgttggagcacggtccagttgtccagagtaccctgtg
cctcaaaatgttcatccatcaactgcacaaccgagccgtgccttggtcatgacaagaatg
gacagtatttctgactcacggctttatgaaagtaaccctacaaggcagagaagacctccc
ctctgccgagagcagcatgctagctgggatccgttaccatgtgcatcagactcttacgct
taccactcgtacccactgagtaacaacctcatgcagccgtgttatgagcctgtaatggta
agaagcatgcctgagaagatggagcagctctggcggaatccctggattgggatatgtggc
gagccacgggaaccacatatcatcccagaacatcagtatcaaacgtacaagaacctctgc
aatattttccctccaagcattgtcctttctgtgatggaaaagaatccccacatgacagat
gcgcaacagctggcagctatgattgttgccaaattaagaacagggcgttaa
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