Phalacrocorax carbo (great cormorant): 104048966
Help
Entry
104048966 CDS
T08596
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04142
Lysosome
pcao04144
Endocytosis
pcao05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104048966 (CLTC)
04142 Lysosome
104048966 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104048966 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104048966 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcao04147
]
104048966 (CLTC)
Membrane trafficking [BR:
pcao04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104048966 (CLTC)
Exosome [BR:
pcao04147
]
Exosomal proteins
Proteins found in most exosomes
104048966 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
104048966
NCBI-ProteinID:
XP_009507851
LinkDB
All DBs
Position
Unknown
AA seq
1651 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC
QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAE
ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISDKHD
VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAQHEATAGIIGVNRKGQVLSVCVEE
ENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGI
LRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYT
PDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALK
NNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFT
DLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHE
QLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
LPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCE
EPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELI
NVCNENSLFKSLSRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQL
AKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVET
ELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTL
VHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQ
DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFY
LEFKPLLLNDLLMVLSPRLDHTRAVTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLF
IIEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKD
RLYKDAMQYASESKDTELAEELLQWFLQENKKECFGACLFTCYDLLRPDVVLETAWRHNI
MDFAMPYFIQVMKEYLTKVDAIKEKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAG
PSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgacaaattcatctgcataagagagaaagtgggggaacaggctcaagtggtg
atcatcgacatgaatgaccccagcaaccctattcgaagaccaatttcagctgacagtgct
atcatgaaccctgccagtaaagtcattgcattaaaagctgggaagacgcttcaaatattt
aacattgaaatgaagagcaaaatgaaggctcatacgatgacagacgatgtcaccttctgg
aagtggatctcgctgaatactgttgcccttgtaacggataatgcagtctatcattggagt
atggagggggagtcgcagcctgtgaaaatgtttgatcgccattctagtcttgctggctgc
cagatcatcaactaccgtactgatgctaagcagaaatggctcctgctaactggcatatct
gcacagcaaaatcgtgttgtgggagcaatgcagctatattctgtagatagaaaagtgtca
caaccaattgagggacatgcagctagctttgcgcagttcaagatggaaggaaatgctgaa
gaatccactcttttctgttttgcagtaagagggcaagctgggggtaagttgcatatcatt
gaagttggcacaccacctactgggaatcagccctttccaaagaaagcagtggatgtcttc
tttcctcctgaagcacaaaatgactttcctgttgccatgcagatcagtgacaagcacgat
gtggtgtttctcataacaaaatatggctatatccacttgtatgacctggaaactggcacc
tgtatctacatgaacagaatcagtggagaaaccatatttgtaactgcacagcatgaagca
acagctggaattattggagtgaatagaaagggacaagtgctctcagtgtgtgtggaagaa
gagaatattattccctatatcacaaatgtgctacagaatcctgacctagctttacgaatg
gctgtccgcaacaacctggcaggtgctgaggaactctttgccagaaaattcaatgcactg
ttcgcacaagggaactattcggaggcagcaaaagtggcagctaatgccccaaagggaatc
ctgcgtactccagacaccatacgccgcttccagagtgttccagctcagcctggacagact
tctcctttactccaatacttcggcattctgcttgaccaagggcagctgaataagtacgag
tcgctggaactctgcagaccagtgcttcagcagggacgcaaacagctcttggaaaaatgg
ctaaaggaagataagctggagtgctcagaggagctgggagaccttgtgaaatctgtagat
cctacgctagcccttagtgtctatctgagagccaacgttccaaacaaagtcatccagtgt
tttgctgaaacaggacaagtccagaagattgttttgtatgctaagaaggttgggtatact
ccagactggatttttttgctgaggaatgtaatgagaatcagccctgatcaaggacagcag
tttgcacaaatgcttgttcaagatgaagagcctcttgcagacataacacaaatcgtggat
gtctttatggaatataatttaattcagcaatgtacagccttcttgctggatgcactgaag
aataatcgtccctcagaaggtcccctgcaaacacgtttacttgagatgaacctcatgcat
gcacctcaggttgcagatgctatcctgggaaaccaaatgtttactcattatgaccgggct
cacatagctcagctgtgtgagaaagctggcttgctacagagagcgcttgaacacttcaca
gacttgtatgacatcaagcgtgcagtagttcacactcatctgctcaatcctgagtggtta
gtgaattattttggttccttatcagtagaagactccctggagtgcctgcgtgctatgttg
tctgctaacattcgtcagaacctgcagatctgtgtccaggtagcttcaaagtatcatgag
caactgtcaacacagtcacttattgagctgtttgagtctttcaagagctttgaaggtttg
ttttatttcctgggctctattgtaaacttcagccaggatccagatgtgcacttcaagtat
attcaagctgcatgcaagacaggacagattaaagaagtggaaagaatttgcagggaaagt
aactgctatgatccagaacgtgttaaaaacttcctcaaggaagctaaactcactgaccag
ttgccgctcatcattgtatgtgatcgctttgactttgtccacgacctggtgctgtacttg
tatagaaataatctccaaaaatatattgagatttatgtacagaaggtgaatccaagccgt
ctgcctgttgttattgggggactgcttgatgtggattgctctgaagatgtgataaagaat
cttatccttgttgtgagaggtcaattttcgactgatgagcttgttgcggaggttgaaaaa
agaaacaggctgaaactgcttctgccctggctggaggcaagaattcacgagggttgtgag
gagcctgcaactcacaatgcactggccaaaatatacattgatagcaacaacaacccagaa
agattcctgcgtgagaatccttattatgatagtcgtgttgttggcaagtactgtgaaaag
agggaccctcacctggcctgtgtggcttacgagcgtggacagtgtgatttggaacttatt
aatgtgtgcaatgagaactccctcttcaaaagtctttcccgctacttggttcgccgtaaa
gaccctgaactgtgggccagcgtgctactggaaagcaacccttacaggagaccgctaatt
gaccaggttgtacagactgcactgtcagagacacaggaccctgaggaagtctctgttact
gtgaaggctttcatgactgcagatcttcctaatgagcttattgaactgctggagaaaata
gttcttgataactctgtgttcagtgagcacaggaatctgcagaaccttctcattcttaca
gctattaaggctgatcgcacgcgtgtcatggaatacatcaatcgcctggataattatgat
gctccagacatagccaatatagctatcagcaatgagctttttgaggaggcatttgctatc
ttcaggaaatttgatgtcaacacgtcagctgtacaggtgttaatagagcacattggaaac
ctggatcgtgcatatgaatttgctgaacgctgcaatgagcccgctgtatggagtcagctg
gctaaagcacagcttcagaaagggatggtcaaggaagcaattgactcgtatattaaagca
gatgatccttcctcgtacatggaagttgttcaagctgccaatgccagcggaaactgggag
gaactggtgaagtatctccagatggcacgcaagaaggcccgggagtcatatgtggaaacg
gaattaatctttgctcttgctaaaacaaaccgcctagcagagctagaggagtttatcaat
ggacccaacaatgcacatatccagcaagttggcgatcgctgttacgatgaaaagatgtat
gaagcggctaagctgttgtataacaatgtgtccaactttggccgtttagcttcaacttta
gttcacctaggtgaataccaggcagctgtggatggtgctcggaaagcaaacagtactcgc
acatggaaagaggtctgctttgcttgtgttgatggaaaagagttccgcctggcccagatg
tgtgggctccatatcgtagtgcatgcagatgagttggaagagctaattaactattaccag
gatcgtggctactttgaagagctgataactatgttggaagcagcacttggacttgagcga
gcacacatggggatgtttacagagctggcaattctctactccaaattcaagccacagaag
atgagggagcacttagagctgttctggtccagagtcaacatccccaaggttctgagagct
gcagaacaagctcatctctgggctgaattggtgttcttgtatgataagtatgaggaatat
gataatgccataatcacaatgatgaatcacccaacagatgcttggaaagaaggccagttc
aaagatatcatcactaaggtggccaatgtggagctgtattacaaggcagttcagttctat
ttggaatttaaacctctgttgctcaatgatctgctgatggtattgtcccctcggcttgac
cacactcgtgctgtcaccttcttcacaaaggttaaacagctaccactggttaagccttac
ttgcgctctgttcaaaatcacaacaacaaatcagtgaatgagtccctgaacaacctcttc
attattgaagaagactaccaggctcttaggacttctatagacgcttatgacaactttgac
aacatttctctcgctcaacgtttggagaaacatgaactaatagaattccgaagaattgct
gcgtatctcttcaaaggaaacaatcgctggaaacagagtgtagaactctgtaagaaagac
agactgtataaggatgcaatgcagtatgcttcagaatccaaagatactgagttggcagaa
gagttgttgcagtggttcttgcaggagaacaagaaagaatgctttggtgcttgtctcttc
acctgctatgatctcctgaggccggatgttgtcttggaaacagcgtggaggcacaacatc
atggactttgccatgccatactttattcaggtcatgaaggagtacttgaccaaggttgat
gcaataaaggaaaaggtggataaactggatgcgtcagagtctttgagaaaggaagaggag
caagctacggaaacacaacctatcgtttatggtcagccacagctaatgttgacagcagga
cccagtgtcgcagttcctccacaagcacctttcggctatggctacactgcacctccgtac
gggcaaccacagcctggctttgggtacagcatgtaa
DBGET
integrated database retrieval system
