Phalacrocorax carbo (great cormorant): 104049025
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Entry
104049025 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: protein RIC1 homolog
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104049025
Membrane trafficking [BR:
pcao04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
104049025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104049025
NCBI-ProteinID:
XP_009507925
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
QLHGVWAQDIIDGTCVAVNNKYRLMAFGCANGSVQVYTIDTTTGAMQFSHKLELTPKQYP
DIWNKTGPVKLIRWSPDSCVVMVTWECGGLSLWSVFGAQLICTLGGDFAYQSDGTKKDPL
KISSMTWGSEGYHLWVIDGNSSSNMKLERDGNNEARQFGILQFHFIKSALTVNPCMSNQE
QVLLQGEDRLYLNCGDATQAQSSRNPSSHSEHXAKEAQDGSLDSQGLSTLLGHRHWHVVQ
IHSTYLESNWPIRFSAIDKVGQNVAVVGKYGFAHYSLLTKKWKLFGNITQEQNMMVTGGL
AWWNDFIVLACYNLNDHQEELRIYLRTSNLDNAFAHITKVQADTLLLSVFRDIVILFRAD
CSICLYSIERRPEGLNPTASIQVLQEVSMSRYIPHPFLVVSVTLTSVRTETGITLKMPQQ
ACEAESIMLNLAGQLIMLQRDRSGPQIRDKDNNPNQRKHLPFCAPVVLAQSVENVWTTCR
INKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLFED
ALVLGAVNDTVLYDCLYTQTSAREHLEVLFPFSIVERTSQIYLHHILRQLLVRNLGEQAL
LLAHSCATLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCA
RKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNT
ALEQGKWDLCRHMIRFLKAIGSGETDTPPATPTTQEPSSSSGFEFFRHRSISLSQSAENL
HSKFNLTKTLSMPSGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEEIKLKDLGCFAAQL
GFELISWLCKERARAARVEDFVFALKKLHKDFLWPLPVMPASSINSPFKNGKYKTAVGEQ
LLKSQSADTFVNMEMDTRVSNTPRSRSWLGTISSSQREIDTVSSHGPHMQDAFLSPLLSK
GDECSIGSATDLTETSSMVDGDWTMVDENFSSQSLTQSELEHISLELASKGPHKSQVQLR
YLLHIFMEAGCLDWCVIIGLILRESSVINQVFSIMQSSDVDGEICQNIKAGLYAVDKWAS
TDCPGYKPFLNIIKPQIQKLSEIAEEQVQPEAFQPVNPSKVTEQVNPRTEESRTSSSHST
NPQSDAGNSNVSRHEEDESKTEVEDSFQEGSYDCIVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
cagctccatggtgtttgggcacaagacatcattgatggaacttgtgtggcagtaaataac
aaatacaggctaatggcatttggatgtgccaacggctctgtgcaggtttatacgatagat
accactactggtgccatgcagttttctcataaattggagctgacaccaaaacaatatcct
gatatttggaataaaacaggacctgttaaactaatcagatggtcacctgatagctgtgtt
gtaatggtgacctgggaatgtggaggcctatccttatggagtgtttttggtgctcagctt
atctgtactttaggaggtgattttgcgtatcagtctgatggtaccaaaaaggaccctcta
aaaatcagttctatgacctggggatcagaaggttatcatctgtgggttattgatgggaat
tcttcttcaaacatgaagctggaaagagatggaaataatgaagctcgccaatttggtatt
ctgcagtttcatttcatcaagagtgcactcactgttaatccttgtatgagtaaccaggaa
caagtcctccttcaaggagaagatcgcttgtatttgaactgcggagatgcaacacaggct
cagagttccagaaatccctcatcacactctgaacatnaagcaaaagaggcccaagatggc
agtttagattctcagggtttaagcactttactaggacacagacattggcatgttgtgcag
attcatagtacatatctggagagcaactggcctataaggttttcagctattgacaaggtt
ggacagaatgtagctgttgttggcaagtatggttttgcacattattctttactcaccaaa
aaatggaagctgtttggaaacattacccaggagcaaaatatgatggtaacaggtggctta
gcctggtggaatgacttcattgttcttgcatgctataatttaaatgatcatcaggaagag
ctgagaatctacctgcgaacgtctaatcttgacaatgcatttgcacacatcaccaaagtg
caagcagacacactactactgagtgtcttccgggacattgtaatattgttcagagcagat
tgttccatttgcctttacagtattgagagaaggcctgaaggtcttaaccctactgccagt
atccaagttcttcaagaagtgtccatgtctcggtacattcctcatccttttcttgtagtg
tctgttacgttgacatcagtgaggacagagactggcatcaccttgaagatgcctcagcag
gcttgtgaggctgaaagtattatgttaaacttagcaggacagctcatcatgttgcagagg
gatcgatctggaccccagatacgagataaggataataatcctaatcaaagaaagcatctg
cctttttgtgctccagttgtcctagcccagtctgttgaaaatgtatggactacttgcagg
atcaacaagcagaaacgccacttattggaggctctgtggctcagctgtggtggggcagga
atgaaagtctggcttcccctgtttcccagggatcatcgaaaaccgcattcctttctgtca
agacggatcatgctgcctttccacatcaacatatacccattggctgttttgtttgaagat
gccttggttcttggtgctgttaatgacactgtgctctatgactgtttatacactcaaacc
agtgctagagaacacttagaggttctctttcctttctccattgttgagagaacctctcag
atctacctccatcacattttacgccagctcttggttaggaacctcggtgaacaagccttg
cttttggcccactcctgtgccacattaccatactttcctcatgtactagaactgatgctt
catgaagtgctggaagaagaagctacctcgcgggaacccattcccgaccctctgcttccc
actgtggcaaagttcattacagaattccccctcttcctgcagacagttgttcattgtgct
aggaagacagaatatgccctgtggaattacctttttgctgctgttggaaacccgaaggac
ttatttgaagagtgcttaatggcccaggacttggacacagctgcctcttatcttattatc
ctacagaatatggaggttccagcagtaagcagacaacatgctactctcctatttaatact
gccttagagcaggggaagtgggatctttgtcgtcatatgattagatttcttaaagccatt
ggctctggagaaacagacacacctccagctacaccaacaactcaggaacctagttcaagt
agtggcttcgagttcttcagacatcgcagcattagtttatcccaatcagcagagaatctc
catagcaaatttaacttgacaaaaacactgagtatgccctctggcccatctggaaaaagg
tggagtaaagacagtgactgtgctgagaacatgtacattgacatgatgctctggcggcat
gctcggcgtctgctagaagaaattaagctgaaagaccttggttgctttgctgcacagcta
ggctttgaactgattagctggctgtgcaaggagcgagccagagctgcccgtgtggaggat
tttgtgttcgctttgaaaaagctacacaaggatttcctctggccattaccagtcatgccg
gcttcatccattaattcacctttcaagaatggaaagtacaagacagctgtgggggagcaa
ctgctaaaatctcagtctgcagacacctttgtaaacatggaaatggacacacgggtttca
aacacacctcggagtcgcagctggcttggcaccatcagctcctctcagagagagattgac
acagtttcatcccatgggccacacatgcaagatgcattcctttctcctttgctaagtaaa
ggtgacgaatgcagcattggttcagcaacggacctgactgaaacaagttctatggtggat
ggtgactggaccatggtggatgaaaacttctccagtcaaagtttaactcagtcagagctt
gaacatatctctctagaactggctagtaaagggccacacaagtcacaggtccagctgcgg
tacttgctacatatcttcatggaagcgggatgtctggattggtgtgttatcataggactt
atcctcagagaatcttcagtaatcaaccaggttttcagtataatgcaatcctctgatgtt
gatggagaaatctgtcagaatatcaaggctggcctatatgctgttgacaaatgggcttct
acagattgccctgggtacaagccatttctcaacatcatcaaaccacagatccagaaacta
agtgaaatagcagaagagcaagtacagcctgaagcttttcagccagtgaatccttctaag
gttactgaacaagtgaaccccagaactgaggaaagcaggacttcatctagccacagcact
aatcctcagagtgatgctggcaacagcaatgtgagcaggcatgaagaggacgagtctaag
acagaggttgaggattcattccaagaaggcagttatgactgtattgtgtcttaa
DBGET
integrated database retrieval system
