Phalacrocorax carbo (great cormorant): 104049109
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Entry
104049109 CDS
T08596
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104049109 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104049109 (PAN3)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104049109 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
104049109 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
104049109
NCBI-ProteinID:
XP_009508022
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MMQRMTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFIS
DLEDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTE
NNLQTPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVG
GTTYFYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYC
LRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMM
SRHFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACR
VMDPTKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACN
SLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANGQL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaggatgacaaatagcagcagctcccctagccttctcaatgacagtgccaag
cagtatgcaggccatgatccgctaacttcaccaaattcatccttgtttaatgactttgct
gccctcagtgtgtctcaaaggaggaagctggcaaaaccagcgtttccttcgtttatctct
gacttggaggacagatataatacagtcttgcccaggaagtatcgactggggatgctggat
gagaggatagttccggtgggatcaaaagcaagaaaatcaaagaaccctattggctgtctg
gctgacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatccttctgcaagtgaatttattcctaaaggaggatcaacc
tccaggctgagtaatgtatcccagtcaagtatgtctgccttctctcaagccttgttttct
cacccctccatgggaagtcctgctactgctgggctagcaccaggaatgtcactgtcagca
ggatcttctcctcttcattcccccaaaataactcctcatacatctcctgctcctcgaaga
agaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcttctgtt
gctaatgctgtctctcagcctccatctactggccaggtgatccagaaggaaacagtgggt
ggaacaacatacttctacactgatacaactccagcacctctcacaggaatggtatttcca
aactaccacatttaccatccagctgcacctcatgttgcttacatgcagccaaaagcaaat
gcaccttccttcttcatggcagatgagctcaggcaggaactgatcaacagacacttaata
actatggcccagattgatcaggctgatattcctgcagttcctgcagaagtggacagctac
cacagcctcttccctttggaaccattgccaccgcccaatcggatacagaaaacaagcaac
tttgggtatattacatcgtgctataaagctgtaaatagtaaagatgacctgccatattgc
cttcggaggatacatggttttcgtcttgttaacacaaagtgcatggtattggttgacatg
tggaaaaaaattcagcactcgaatatagtaaccttgcgtgaagtgtttaccactaaagca
tttggagaacattctcttgtgtttgcatatgattttcatgctggaggagagactatgatg
agcagacacttcaatgatcctagtgctgatgcctattttacaaaacgaaaatggggtcag
catgatggacctttaccacggcagcatgctggattgcttccagagtctttgatatgggca
tatattgtgcagctcagctctgcgttacggaccattcatacggcaggactggcgtgccga
gttatggatccaacaaagattctagtaacgggcaaaacaaggttacgagttaattgtgtt
ggaatctttgatgttctgacatttgacaacagtcaaaataatccgctggcattaatggct
cagtttcagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgcaat
tctttatcaggaattcagagagagaatttgcagaaagcaatggaactggtgacaatcaac
tattcctctgatctgaagaatctgattttgtatttgctgaccgaccaaaacaggcttcgc
agtgtaaatgatatcatgcctatgattggtgcgcgattctatactcagttggatgctgct
caaatgcgaaatgatgttatagaggaagaccttgcaaaggaggtgcaaaatggaaggttg
tttaggcttctagcaaaattgggaacaatcaatgagagaccagagtttcagaaggaccca
acgtggtcagaaactggagacaggtatttactaaagctctttcgagatcaccttttccat
caggtgacagaagcgggtactccttggattgacctcagtcacattatctcatgtcttaac
aagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgta
cttgtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactgatt
gcagccgcaaatggtcagttgtag
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integrated database retrieval system
