Phalacrocorax carbo (great cormorant): 104049180
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Entry
104049180 CDS
T08596
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03440
Homologous recombination
pcao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104049180 (TOP3A)
03460 Fanconi anemia pathway
104049180 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcao03032
]
104049180 (TOP3A)
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104049180 (TOP3A)
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104049180 (TOP3A)
DNA replication proteins [BR:
pcao03032
]
Eukaryotic type
DNA Topoisomerases
104049180 (TOP3A)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104049180 (TOP3A)
FA (Fanconi anemia) pathway
104049180 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
zf-CCHC
zf-CCHC_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
104049180
NCBI-ProteinID:
XP_009508111
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MNFRARLSTICGVRMLPQPWRLFSRAAEDMALQRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWHGCNPLALFDAEI
EKYCPENYMDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRTACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLV
LYQMCMEDPVATVVEVGSKPKSKWRPLALDTVELEKLASRKLKINAKETMRLAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRNGTKSDQAHPPIH
PTKYAANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIAYERFVAQGLMILARNYL
EVYPYERWSDKVIPLYEKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATH
AEHIETIKMRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSVVLQQQVQKYKQVFTEAVARANKLDQALAQYFGEATEIAEQEEVYPAMPVSVRKC
PQCNNDMVLKTRKNGGFYLSCTGYPACKTAVWFPDFVLDVARDESICAVCKPHPVHRLKF
KFKRGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRPSQSTSSAGQQAHHLQVNNSFNR
AGGENRHVRGTTNLAPGHLLSLSSTRTARPAPSAAPDDGNNAVVCNCGNEALLLTVRKEG
PNQGRQFYKCSAGTCNFFLWADQSEDRSSRAPQGSVLAQPFAGRGPAGFQHPGGGRGPEL
FGSNSSDSGGGTVCKCNQPAVTRTVQKDGPNKGRQFHTCPKPREQQCGFFQWADENAAPG
PSGDVSLNHFGSSGYSRGLGSKAKRPSSLSSGATAKKARTCSLCHQPGHTRRNCPQNH
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcgagcaaggctctccactatctgcggggtcaggatgctgccgcagccctgg
cgtctcttctcccgggctgcggaggatatggcattgcagaggatccggaaggtcctgtgc
gtggctgaaaagaacgatgctgcccgagggattgcagatctgctgtccaacagcagaatg
cgacggcgagaagggttttccaagttcaacaagatctacgaatacgactaccagatgttt
ggccagaatgttactatggtgatgacgtcagtgtcaggacacttactggctcacgatttt
aagctgccatttcgcaaatggcatggctgcaaccctctagctctttttgatgctgaaatc
gagaagtattgccctgaaaattacatggatatcaagagaacccttgaacgagaagtccag
cagtgccaagcgctggtgatctggactgactgcgatcgagaaggggagaacatcggcttt
gagataattcacgtttgcaaagctgtaaagccaaacctccaggttttccgagcccgtttt
tcagagattacacttcacgctgtcagaacagcctgcgagaacctcacccaaccggatcaa
aaaacgagcgatgccgttgacgtcaggcaggagctggacctcaggataggtgctgctttc
accagattccagacgctgaggctgcggaagatcttccctgatattttagcagatcagctg
atcagctatggtagctgccagttcccgacgctggggtttgtagttgaacgctttaaagcc
atccaggcctttgttcctgaagccttctataaaataaaagtgacacatgatcatgaagat
ggcagtgtggtcttcaactggaagaggaaccggctctttaatcacacagcctgcctcgtc
ctttaccagatgtgtatggaggatccagtagcaactgttgttgaggttgggagcaagcca
aagagcaaatggaggcccctggccctggacactgtggaacttgagaagttggcttcccgc
aaactgaaaataaacgcaaaggaaaccatgagactagcagaaaaactctatactcaaggg
ttcattagctacccccgaactgaaaccaacattttccccaaggagctgaacctctctgcc
ttagtacaacagcagacacaggacccaaactggggagcatttgcacagaggattttggat
cagggtgggccaacccctcggaatgggaccaaatcagaccaggctcaccctcccattcac
cccacaaagtacgctgctaacctgcagggcaacgagcagagattatatgaattcattgtg
cgccattttttggcctgctgctctcaagatgccaagggacaggaaacaactgtggagatc
gacattgcttatgagcggttcgttgctcaaggactaatgatcctggcccgaaattatctg
gaagtctatccttatgagaggtggagtgataaggttatcccactgtatgagaaagggtct
cgctttcagcccactacagtggagatggtggatggggaaaccagccctccattgctcctc
acagaagcggatctcattgctctcatggagaaacatggcattgggactgacgccactcac
gctgagcacattgagacgattaagatgcggatgtacgtgggccttacagcagatcagcgg
ttcctcccaggccacctgggcatggggctggttgaaggctatgattccatgggctatgag
atgtccaagcctgaccttcgagctgagctggaggctgatctgaaactgatctgtgagggg
aagaaggacaaatctgttgtgttgcagcagcaggtccaaaagtacaagcaagtcttcacc
gaagctgtggccagagccaacaagttggaccaggccctggctcagtattttggagaagcc
acagaaattgcagagcaagaggaggtctacccagcaatgcctgtttctgttcgaaagtgt
ccacagtgcaacaacgacatggtcctgaagaccaggaagaacggcgggttctatctcagc
tgcacaggctatccagcttgtaaaactgcagtctggtttcctgattttgtgctggacgtg
gccagggacgagagcatctgtgctgtgtgtaaaccacatccagttcacagactgaagttt
aaattcaagagaggcagtgttccacctgtgatgcccctggagtttgttggctgcattgga
ggctgtgatgagatgctaaaagagctcttggacctgaagtatttacacaggccgtcccaa
tccacatcgtcggctggccagcaagctcatcacttgcaggtcaacaactcctttaacaga
gctggtggtgaaaacaggcatgtgagggggactacaaacctggcaccaggacatctactc
tccttgagctcaacgagaacagccaggcctgctccttcagctgccccagatgatgggaac
aatgcagtggtgtgcaactgtgggaacgaagccctgctgttaactgtgcgcaaagaaggg
cccaatcaaggcaggcagttttacaaatgcagtgccggtacctgcaacttttttctctgg
gctgatcagtcagaggacagaagcagcagggctccgcagggctctgtgctggcccagccc
tttgcaggaaggggcccggcaggatttcagcacccaggaggagggagaggcccagagctc
tttggaagcaacagctccgattcaggaggtggcacagtctgtaagtgcaaccagccagcc
gtcacgcgcaccgtccaaaaggacgggcccaacaaagggcgccagttccacacctgccct
aaaccccgagagcagcagtgcggcttcttccagtgggcagatgaaaacgcggcaccaggg
ccttctggagatgtctctttgaaccactttggcagcagcggatactcaagagggttggga
agtaaagccaagagaccaagcagtctctcctcaggagccactgccaagaaagcacggacc
tgtagcctttgccaccagcctggccacactaggagaaactgccctcagaaccactga
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integrated database retrieval system
