Phalacrocorax carbo (great cormorant): 104049196
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Entry
104049196 CDS
T08596
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104049196 (RBBP6)
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104049196 (RBBP6)
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
U-box type E3
104049196 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
DWNN
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104049196
NCBI-ProteinID:
XP_009508126
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
YTDDSALIPKNSSVIVRRIPIGGVKATSKTYVISRTEPVSGTSKAIDDSSASISLAQLTK
TANLAEANASEEDKIKAMMTQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPT
NGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKP
PFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTC
PTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQPPPPPPPPPLMRQ
TITRNLQPLLRPTISRQQDPLMIPLASLASRSAALSSLGPGQSSVAAGLPVNPSSVVVSD
LPPAVSLSLRGEKPDGPFRDADTVIPPAALVTAAELSKSSSLSITSLLEEKGYQVPVLRQ
PALPSLLGPQGQSIPTTGESGQSVTDTFLDSFSSNRGRPHSERAQRTQAPTLPASTPVFV
PVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYSVPPPGYPPAPANMSSAWVP
TAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQK
ERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRG
KGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTIPQGEGEREYFNR
YREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQPRPPVNREN
FSPDRFGPPGTRRENSPYARGRREDYPGGQSHRNRNIAGNYPEKPSGRESHGIKDPTKSK
EKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNAELLEGARKPREPAAAEDVKTDSLFML
PSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIDKTKRKVEVAVPPKKDNTVKP
AKASQEKADAEREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKALGTPRKVHPKVTKD
HPETRPAKEEKAKKDHPKETKSEKPSNKEDKSKKPAEKSKPSDAKPEKRKRKADEKVDKE
HEATSVKASKPETAESKTSPKGKTEPDGEKGERTPEKDKSAFLNNPAKKIKLNRETGKKI
VSGENVPPAKEPAEKPEPSSSKVKQEKAKGKVRRKVTAADGSGSTLVDYTSTSSTGGSPV
RKTEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDIKSTQVP
ANVGKPASVVKNVSAKPANPVKHSEKEMEPLEKTQKTTKEASYESSQHDAKSSKSSVSNE
KGKTKDRDHSSSDKDTSEKRKSSVQPEKDHSERATEQGNGKNVSQSSKDSRSSEKHDSSR
GSTAKDFTPNRDKKSDHDGTRDHSGSKRRDEKSELARRKDSPSRNRESTSVQKSKPREER
AEPSKKGAGDAKRSSYSPPRERKQTDHKAAHDSKRTLEEHKPPDKNAGKEKEKEKHVPEV
KSNKEKEPAGNKPPVKQESPDVKNEKENVAGQNDKSAVKPKPQVSSSSRLSSDLTRETDE
AAFVPDYNESDSESNVSAKDEDAAGKNAKEPKEKAVEKAKEETAAPAAAAQPEASRSQSQ
SSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHKKHKKHIGN
ETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5150 nt
NT seq
+upstream
nt +downstream
nt
aatacacggatgacagcgcgctgattcctaagaactcgtcggtgattgttagaagaatcc
ctattggaggagttaaagctaccagcaaaacatatgttataagtcgaactgagccagtga
gtggaacatcaaaagcaattgatgactcttctgcatctatttctctggcccagcttacta
agactgccaatctggctgaagccaatgcttccgaagaagataaaataaaagctatgatga
cacagtctggccatgaatatgatccgatcaattacatgaagaaacccttgggtccacctc
caccatcatatacttgctttcgttgcgggaaacctggccactatataaagaactgcccaa
cgaacggggacaaaaattttgagtctgttcccagaattaaaaagagcacaggcattccaa
ggagtttcatgatggaggtgaaagatcccaacacgaagggtgctatgctgacaaacactg
gaaaatacgcgataccaactattgatgcggaagcttatgcgataggaaagaaggaaaagc
ctcccttcttaccagaggagccgtcctcctcctcagaagaagatgatcctattccagatg
agttgttatgtctcatctgtaaagatattatgaccgatgcagttgttattccctgctgtg
ggaacagttattgtgacgaatgtattagaacagcgttactggaatctgaggaacatacat
gcccaacgtgtcaccaaacagatgtttctcctgacgctttgattgccaacaagttcctac
gccaggctgttaacaacttcaaaaatgaaactggctacacgaaaaggctccgtaagcaga
ttcaacagcaacagcagcagcaaccgccacctccgccacctccaccacccctaatgagac
aaacgataacacgtaacctgcagcctctactccggccaacaatttccagacagcaggatc
cactaatgataccattagcttctctggcttctcgttctgctgctttgtcatcgctgggcc
ctggtcagtcatctgtggcagctgggttgccagtaaatccgtcttctgtcgtcgtctctg
atctccctccagcagtgtccctgtctctccgtggtgaaaagccagatggaccttttcgtg
atgccgatacggtcatacctcctgctgctctggtgactgccgccgaactttctaaatctt
cctctctgtcaatcaccagtttgttggaagagaagggctatcaggttccggtactgagac
aaccagcgttaccaagtcttctgggcccccaaggacaatcaattcccacaactggtgaat
cggggcagagtgtaacagacacgtttttggattcctttagttcaaatcgaggacgcccgc
acagtgaacgtgcccagaggactcaggccccgacactaccagcatcaacaccagtctttg
tgcctgtgcctccacctcccttgtatcctccaccaccccacgcactccctcttccaccgg
gggtgccaccaccacagtttcctcctcagtttccgcctggtcagcctccatctgctgggt
acagtgtcccccctccaggatatcccccagctcctgcaaacatgtcatcagcctgggtac
caacagctgtaccagcggctcattcaaataccatcccaacgacacaggcacctcctttat
ctagggaggagttttacagagagcagcggagacttaaagaggaggaaaagaaaaagtcca
aacttgatgagtttacaaatgattttgctaaggaattgatggaatataaaaagattcaaa
aggagcgtaggcgttcgttttccaggtccaagtctccctatagtgcttcatcttactcta
gaagttcgtatacctactccaagtcaagatcaggttcttcccgctctcgctcctactctc
gatcatttagccgttcccattctcgttcctactcacgatcgccaccgtatccaaggagag
gcaaagggaagagtcgtaactatcgctctaggtccaggtcacacggttatcaccgttcaa
ggtcaaggtcacccccatacagaagataccattctcggtcaaggtctccagtatttagag
gccagtctcccactaaacggactatacctcaaggggaaggagaaagggaatattttaaca
gatacagagaagttccaccctatgatatgaaagcttactatggcaggtctgttgacttta
gagatccatttgaaaaggaaagatacagagaatgggaaaggaactacagagaatggtatg
aaaagttttacaagggctatgctgttggcgctcagcctcgacctccagtaaacagagaga
acttttctccagataggtttggtccacctgggaccaggcgagagaactcgccgtacgctc
ggggacgtagggaggattatcctggtgggcagagccacagaaatcgtaatattgctggaa
attaccctgaaaaaccttctggaagagagagccatggcatcaaagatcctacaaaatcaa
aagagaaggaggtggaaaacccactgggagatggcaaaggaaataaacataaaaaacacc
ggaagagaagaaaaggggatgagaatgaaggatttcccaatgctgagttgttggaaggcg
cgagaaaaccaagagagccagctgcggcagaagacgttaaaacagactctctgttcatgc
tcccaagcagagatgatgccacccctgtgagagatgagcctatggaagcagattctattg
ctttcaaaccggtgtctgagaaggagaaaaaagagaaggataagccaaaagcaaaaattg
acaagacgaagcggaaagtagaagtggctgttcctccgaagaaagacaatacagtaaaac
cagctaaagcctcccaggagaaggcggatgccgagcgtgaaaaatcgcctcgaacagaac
ctcctgtgaaaaaagtgaaggaggagttgccaaagacagacagtgttaaaacatcttcct
ctcagaaggatgagaaggctcttggtaccccacggaaagttcacccaaaagtgacaaaag
atcacccagaaaccagaccagccaaggaggaaaaggcaaagaaagaccatccaaaagaaa
ccaagtcagagaagccctccaacaaagaggacaagtcaaaaaaacctgctgaaaaaagca
aaccttctgatgcaaaacccgaaaaaagaaaaagaaaagcagatgaaaaagtcgataaag
aacatgaagccacttctgtaaaggcctctaaaccagaaaccgctgaatcgaaaacatcgc
cgaaggggaagacggagcccgatggtgaaaaaggagagcgaactccagaaaaggataaat
ctgcttttcttaacaaccctgcgaaaaagattaaacttaatcgagaaactggcaaaaaga
ttgtgagtggagagaacgtgccacctgcaaaagaacctgctgagaaacctgagcccagca
gcagcaaagttaaacaagaaaaagcaaagggaaaagtgagaagaaaagtaacagcagctg
atggatctggttcaactcttgtagattataccagcactagttctactggaggaagccccg
ttagaaagactgaagagaagccagatacaaaacgaactgtcattaagaccatggaggagt
ataataatgatataacagcccctgctgaagacgtcattattatgatccaggtccctcagt
caaagtgggataaagatgactttgagtccgaagaggaagacattaaatctacccaggtgc
ctgcaaacgtaggaaaacctgctagtgttgtaaagaacgtgagtgcaaagccagcgaacc
ccgtaaaacacagtgagaaggagatggaacctttggagaaaacgcagaaaacgacaaaag
aggcgagttatgaaagctcccagcatgatgcaaaaagttcaaaaagttccgtgtcgaatg
agaaaggaaaaaccaaagaccgggatcattcttcgtcagacaaggacacttctgagaaga
gaaagagcagtgttcagccagaaaaagaccactcggaacgtgcgaccgagcaaggaaatg
gaaaaaatgtttctcaatcttccaaagacagcaggtcttcagagaaacacgattctagcc
gtggatccactgctaaagactttaccccgaaccgagacaaaaaatctgaccacgatggca
ccagagatcattctggttccaagcggagagatgaaaagagtgaattagcaaggagaaaag
actccccttctcgaaacagagaatctacatcggtacagaagagtaagccaagagaagaac
gagcagagccgtccaaaaagggcgctggagatgccaagaggagcagctacagccctccgc
gtgagcggaagcagactgaccacaaagctgctcacgattccaagcgtacgttggaggagc
acaaacctccggataaaaacgcaggaaaagagaaagagaaggagaagcacgtgccagaag
taaagagcaataaagagaaagagccagctggtaataaaccacctgtgaaacaagaatccc
cagatgtaaaaaacgagaaagagaatgtggctggacaaaacgataaaagcgctgtcaagc
ccaagcctcaggtaagcagctcctcacggctctcttctgatctgactcgagagactgacg
aggcagcgtttgtaccagactacaacgaaagtgacagtgagagtaatgtatctgcaaaag
acgaggacgcggcaggaaaaaacgcgaaagaaccgaaagaaaaggctgttgagaaggcga
aagaggagacagcagcgcccgctgcggctgcccagcccgaagccagccgaagtcaaagcc
agagcagccccagcgttagccgcagccggagtcagagcccttccgagagtcagactcgaa
gccacagcagcagtgccagctcaggagagagccaagacagcaagaaaaagaagaagaaaa
aggagaagaagaagcacaagaagcataagaaacacaagaagcataagaaacacattggaa
acgaaacggaattggaaaagagccaaaaacacaaacacaagaagaaaaagtcgaagaaga
gcaaagataaagagaaagatgaccaaaaagtgaaatctgtcactacatag
DBGET
integrated database retrieval system
