Phalacrocorax carbo (great cormorant): 104049491
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Entry
104049491 CDS
T08596
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104049491 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104049491 (DHX36)
03012 Translation factors [BR:
pcao03012
]
104049491 (DHX36)
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104049491 (DHX36)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104049491 (DHX36)
Translation factors [BR:
pcao03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104049491 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
104049491
NCBI-ProteinID:
XP_009508485
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MDERREEQIVQLLNTVQTKNEKEQEAMSWWSGDEEGPTPEQPAKVKPEAEKAPVRQRPVL
EKTFLDRDVEYLFEKNEQDTDLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVN
LINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSMCRIVCTQPRRISAISVAERVAA
ERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHE
RNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLL
EDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPEKEEKEEIYRERWPDYLRQLRGRYSAST
IDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR
FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD
TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE
LCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPV
EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLT
VVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVNSRDPKD
PKSNINSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEE
TEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQS
PARIAHLVKSSILQEKIENPHPVDWNAIKSRDTAVLTAIIDLITTQENESARNYAPRFQS
ERYS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcagggaagagcaaattgtacagctgttgaatactgtccaaactaaaaat
gaaaaggagcaagaagccatgtcctggtggtctggggatgaagaaggacctactccagaa
cagcctgcaaaagtgaaaccagaagctgaaaaagctcctgtaagacagagaccagtctta
gaaaaaacatttcttgatcgggatgtggaatatctctttgaaaaaaatgagcaggatact
gatttagatgagcaacttaaagaagacttaagaaagaagaaatctgatcctagatatatt
gaaatgcagagattccgagagaaactcccttcatatgggatgagacaggaacttgtaaac
cttataaacaataatcgagtaactgtgataagtggtgaaactggttgtggaaagacaacc
caagttacgcagttcatcttggatgattacatagagcgagggaaagggtctatgtgcagg
attgtttgtactcagcctaggaggatcagtgccatctcggtggctgagagagttgctgct
gaaagggcagaagcatgcggtaatggcaagagtacaggctaccaaattcgtctacagagt
cggttaccaaggaaacaagggtcaattttatactgtaccacaggaattgtcctacagtgg
ctccagtcagataagcacttgtccagtattagtcatgtagtccttgatgaaattcatgaa
agaaatcttcagtcagatgttttaatgagcattattaaagatcttttgaatattcgtttg
gatctgaaagtaatactaatgagtgctactttaaatgcagagaagttttcggagtatttt
gataattgcccaatgattcacatacctgggttcactttccctgtggtggaatatcttctt
gaagatgtaattgagaagttgaggtatactccagagaacacagatcgtcggccacggtgg
aagaaaggctttatgcaaggacatgtaagcagaccagaaaaagaagaaaaagaggaaatc
tacagggagcgatggccagactacttaaggcagctgcggggcaggtattcagcaagtact
atagatgccttggaaatgatggatgatgacaaggtcgaccttgaccttatagcagcactt
atcagacacatcgttttggaagaagaggatggtgcaattctagtgtttcttccaggctgg
gacaacattagcactttgcatgatctcttgatgtcacaagtcatgtttaagtcagatagg
tttattatcatacctttacattcattgatgcctactgttaaccagactcaggtttttaag
aagaccccgccaggagtaaggaagattgtgattgctaccaacattgctgagactagcatt
acaatagatgacgtcgtgtttgttatagatggtggaaaaataaaggaaactcattttgac
acacagaacaacattagcacaatggcggcagagtgggttagtaaagctaatgccaagcag
aggaaaggtcgagcaggaagagttcagccaggccactgttatcatctatataatggacta
cgtgctagccttctagatgattatcagttaccagagatcttgaggacacctttggaagaa
ctctgtttacaaatcaagattctaaagcttggtggaattgcttattttctgagtaaacta
atggacccaccatctcgtgatgctgtaatgttggccataaatcatctaatggagctgaac
gctttggacagacaagaagaactgactccactaggtgtccatttagctcgattaccagtt
gaaccacatattggaaaaatgatcctctttggagctttattctgctgcttggatccagta
cttacaattgcagctagcctcagcttcaaggacccttttgtcattcccctgggcaaagag
aaagttgcagatgcaagaagaaaggaactgtcaaagaacactaaaagtgatcatctaacc
gtggtgaatgctttcacgggctgggaagagactcggcgtcgtggtttcagaactgagaaa
gactattgctgggaatatttcctgtcttcaaatacactccagatgctgcataacatgaag
ggacagtttgctgagcatctccttgcagctggatttgtgaatagcagagaccccaaggat
cccaaatctaatatcaactcagataatgaaaagctgctcaaagcggtcatctgtgctggt
ttatatccaaaagttgcaaagatccggccaagcttcagcaaaaagagaaaaatggtaaaa
gtttgcaccaagacagatggaacagttaatattcatcctaaatcggttaatgtggaagaa
acagagttccattataactggctggtgtaccatttgaagatgagaactagcagtatctac
ttgtatgattgtacagaggtctctccatactgtctcttgttctttggaggagatatatcc
attcagaaggataaggatcaggataccatcgctgtggatgaatggattgttttccagtct
ccagcgagaatagctcacttagttaagagctcgattctacaagaaaaaatagaaaatcca
catcccgtggactggaatgctattaaatccagggatacagcagtactgacagctattata
gacttaatcacaacacaggagaatgaaagtgccagaaactatgctccacgattccagagt
gaacgctatagttga
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