Phalacrocorax carbo (great cormorant): 104049639
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Entry
104049639 CDS
T08596
Symbol
AFF1
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 1
KO
K15184
AF4/FMR2 family member 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104049639 (AFF1)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
104049639 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
104049639
NCBI-ProteinID:
XP_009508657
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MEQQTFPSDVQSIEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPAKESQHVGCVAQNQK
QYDAPSKALPSSLPRTSTLQDDLQLSDSEESGDDQVVEKPPSSLAPPSALQSQPKSVASA
HSSSPESGSTSDSDSSSDSETESNSTDSEANNLPRASAPEPDPPTSNKWQLDNWLTKVNP
PAVPTESLSEIAHGDGCEEGKEPEQGVSSNSSHQHVEPREPHHESSSQAGGAPEDAHLPT
KHNCQKSPLCAEESLPRQTADIKRPSKAPVHEVSKGCLKVESDTGPFEVRDQSSRDKPKV
KTKGKPKSSDRKDLKPXXXXXXXXXXHKSSHQANTKPFLDLKRMREVLFGSTHRHLALSA
LPEGQDKTPTRTSGHRPAIVAREDFHKEKLPVPIREKKLLSPAKDSPTPPSLVVKIDLNL
LSRVPQPPGKGSHQKRPEAKELPSARKQDLEKKTTDTPDKSLQKRKRQVEKEIDRKKMKP
EKEKKSLQSSANEDSSKLKASKASFETQKKDLLLPPPPPPMSLAQPASKPTKMAQKRPRS
ETCELPAMDNTASNKSNHKDPLFSKHKKVERNHAELLKGIKGSAGDVTNPFPVPSLSNGT
SKPRRPQLNFEKQHPTEYYIEEAKRLKHKADAMTDKTGKAFQYLDAALSFIEYGIALESD
APVPKSAYSIFSDTIDLIKFTMALKSFADSSASSHEKIFAVLCMRCQSILHMATFRYKKD
TAIKYSRILNDHFKSSSRVTKAPSPCVARSTGMPSPLSPMPSPASSVTSQLGSNASNFSG
NSIGSSVTVPYNIPSITSSYVNITSYILYAYDIWEQADALARKNKEFFAELSTATCALAL
NSSMTELVHYTRQGLQWLRLETNMP
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaaaccttccccagtgatgtccagtctattgaagaaattttgaaggaaatg
acccactcatggccacctcccctgacagctattcatacgcctagtacagcagaaccttcc
aaatttccgttcccagcaaaggaatcacagcatgttggatgtgtagcacagaatcagaaa
cagtatgatgcaccttcaaaagcgttgcctagttctctaccaagaacatcaacgctccag
gacgacctgcagctcagtgatagtgaagagagtggtgacgaccaagttgttgaaaagcca
ccttcttcacttgctcctccaagtgccctacagtcccagcccaagagtgtggcatcagca
cattccagcagcccggagtcagggagcaccagtgactcagacagctcttcagactcagag
acggagagcaactcgactgacagtgaagcaaacaaccttccgagagcatcagcacctgag
cctgacccaccaacttctaataagtggcagctcgacaactggctaaccaaggtgaatcca
ccagcagtaccaacagagagtctcagtgaaattgcccatggggatggatgtgaggagggc
aaggaacccgaacagggtgtcagcagcaattcctcccaccagcacgtcgagccgagggag
cctcatcacgagagctccagccaagcaggcggggctcctgaggatgctcatcttccgacc
aaacacaactgccagaagtctcctttgtgcgccgaggagtccttgcccaggcagactgcg
gatatcaaaaggcccagcaaggccccggtgcatgaggtgtccaagggatgcctgaaagtg
gagagtgacactggtccctttgaggtcagagaccagtcttccagagacaagccaaaggtc
aaaacgaaagggaagccaaaatccagtgacagaaaagacctgaagccgnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnncacaagagctcccaccaggccaacaccaaacccttcttggac
ctcaaacgcatgagagaggttttgtttggcagcacccacaggcatcttgctctcagtgcc
cttcctgaaggccaggacaaaacccccaccaggactagtggccacaggcctgccatcgtg
gccagagaggattttcacaaggagaaacttcctgtccctatcagggagaagaagttgctc
tcaccagcaaaagactctcccacccctccgtccctcgtggtgaaaatagatctcaatctt
ctgtcaagagtcccccagccccctgggaaaggcagtcaccagaagagaccagaggccaag
gagctccccagtgcaaggaagcaggacttggagaagaaaaccacagacactcctgacaag
tcccttcaaaagaggaagaggcaagtggagaaggagattgataggaagaaaatgaaacca
gaaaaagaaaaaaaatcattgcagtcttcagctaacgaagactccagtaaattgaaagca
tcaaaagcttcatttgaaacccagaagaaagatctcctgctacccccgccaccaccaccc
atgtctcttgcacagcctgcatcaaagccaaccaagatggcccaaaagagacccagaagt
gagacctgtgagctgccggccatggataacactgccagtaacaagagcaaccacaaggat
cctttgttctccaagcacaagaaagtggagagaaatcacgctgaactgttgaagggcatc
aaaggatctgcaggggatgtcacaaatcctttcccagtgccttctttgtcaaatggtacc
tccaagccaaggagacctcaactcaactttgaaaaacagcatccaacggaatactacata
gaagaggccaagaggctaaagcacaaagctgatgcaatgaccgacaagactggaaaggcc
tttcagtacctagatgctgccctttccttcattgaatatgggattgccttggaatcggat
gcaccagtaccaaaatcagcttacagcatattcagcgacaccatagatctcatcaaattc
accatggcactgaaatcctttgcggactcctcagcatcttcacatgaaaaaatctttgct
gtgttatgcatgcgctgccagtccattctgcacatggcaacatttcgttacaaaaaagat
actgcaataaagtattccaggatcctcaatgaccacttcaagagctcttccagagtaaca
aaagcaccttctccatgtgttgcaagaagcacaggcatgccttctcctctttctccaatg
ccctctcctgccagttctgtgacttctcagctgggatcaaatgctagcaacttcagtggc
aacagcattggttcttcagtcactgtcccttataacatcccaagcatcacctcttcctat
gtcaacatcacttcctatatcctctatgcatatgatatttgggaacaggctgatgcactg
gccaggaagaataaggagttttttgctgaactcagcacagcgacatgcgctctggcactg
aacagtagcatgactgaactggtacactacactaggcagggtttacagtggctgagactg
gaaacaaatatgccttaa
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