Phalacrocorax carbo (great cormorant): 104049830
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Entry
104049830 CDS
T08596
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104049830 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104049830 (GSPT1)
03012 Translation factors [BR:
pcao03012
]
104049830 (GSPT1)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104049830 (GSPT1)
Translation factors [BR:
pcao03012
]
Eukaryotic type
Release factors
104049830 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
104049830
NCBI-ProteinID:
XP_009508884
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MEISESVVENGETEMSPEESWDHKEETSEAELGGGPTGDAGPSEESAQEMMEEEEEIPKP
KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET
WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK
LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRSVDG
PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGE
NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI
EEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
DEGKTIAIGKVLKLVPEKD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttcagaatctgttgtggaaaatggagagacagaaatgtccccagaagagtca
tgggaccacaaagaagaaacaagtgaagcagaactaggaggtggtcccacaggggatgca
ggaccttctgaagaaagtgctcaggaaatgatggaagaggaggaggaaataccaaaaccg
aaatctgttgtagcaccaccaggtgctcctaaaaaagagcatgtaaatgtagtattcatt
gggcatgtagatgctggcaagtcaacaattggaggacagataatgtatttgacaggaatg
gttgacaaaagaacacttgaaaaatatgaaagagaagctaaagaaaaaaacagagaaaca
tggtacctttcatgggccttagacacaaaccaagaagaacgagacaaaggtaaaacagta
gaagtgggtcgtgcctattttgaaactgagaagaaacacttcactattctggatgctcct
ggacataagagctttgttccaaatatgattggtggggcttctcaagctgatcttgctgtg
ctggttatttctgcaagaaaaggagaatttgaaactggatttgagaaaggtggacaaaca
agagaacatgccatgttagcaaaaacagcaggtgtaaaacatttaatagtccttattaat
aaaatggatgatccaactgtaaactggagtaatgaaagatatgaggaatgtaaagagaaa
ctggtgccatttttgaagaaagttggcttcaatcccaaaaaggatattcatttcatgccc
tgctcaggactgactggagcaaaccttaaagaacagtcagaattctgtccttggtatatt
gggctaccatttattccatacctggataatttgccaaacttcaaccgttcagttgatgga
ccaatcaggctgccaattgtggataaatataaggatatgggcactgtggtccttgggaag
ctggagtcaggctctatttgcaaaggacaacagcttgtgatgatgccaaacaagcacaac
gtggaagttcttggaatcctttctgatgatgtagaaactgattcagtagccccaggtgaa
aatctaaagatcagactgaagggaattgaagaggaagagatccttccaggatttattctc
tgtgatcccaacaacctgtgtcattctggacgcacatttgatgcccagatagtgataatt
gagcacaaatccattatctgcccaggttataatgctgtgctgcacatccacacctgtatc
gaagaagtcgagataacagccttaatctgcttggtagacaaaaaaacaggagaaaaaagt
aagacacggccccgttttgtgaaacaagatcaagtatgcattgcccgtttaaggacagca
ggaactatctgccttgagacattcaaagatttccctcaaatgggtcgctttaccttaaga
gacgagggtaagaccattgcaattggaaaagttctgaaactggttccagagaaggactaa
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