Phalacrocorax carbo (great cormorant): 104049928
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Entry
104049928 CDS
T08596
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104049928 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104049928 (ATRX)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104049928 (ATRX)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104049928 (ATRX)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104049928 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADD_ATRX
SNF2-rel_dom
DUF6395
Motif
Other DBs
NCBI-GeneID:
104049928
NCBI-ProteinID:
XP_009508999
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MDLSLGQNWSRVEGKSREPKSSPVSMENNREEGSSSSERTKSLGSSRSKRKPTVVTKYVG
SDDEQVLDETVNEDISNENSENDVDMKSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNAV
KMKPEAPKKRGEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDIS
RDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHP
EPLLDLVTACDSVFENLEQLLQQNKKKIRVESEKSKIYDHTVKFSPKRNNSNCNGEGKNL
NDSYSGSLTYSYKALVVPKDLLKKTRKLVETTTNLNSSFVSFLKNAAENVEITPSVQLCQ
LKAFKSVLSDMKKAHLALEEGLNLEIQALNVKIKDKNTKEKKPGVRLEKDEVNKDGKERV
ALKENDTVKTQKKVVSERPDGEPMDQSVPATEQAGNKRTSGEEKRSGRNEEPQYEPNSTE
ALDMDIVSIPSSVPEDIFETLESAMEIQITSDEQDSGNTGTDHETPNSNTKSNTPMKDTK
GGTKLKSSAKGTKELIVKLTPVSLSESAVKAEDQDSSLEKDRKDVDAIPRAENCDSVKQN
HNAGSEPSTENETVSLVEESDLRRSPRVKTTPLRRQTDINPLTSNSEEDSNDTCSEKRKR
KSSKQPRRKNDKRNSSDSTADGPSPNKLSKSKTPYTLDQSSDSDEMPAVLKEVAMMSHSS
SDIDSNSEAPTNDQKTLDFLQTQPVKDENGKRKRKSSSSGSDLDAKRGKSVKNSAAAKKK
RQNYSDSSNYDSELEKEIKILSKIESAKKAKKKYSRKDDSYDSSEEEQRKKVSSKRKINL
KKQRDKSSEDDDAEKSSPEKEIDHSSKDKNGKGAAAKERLNRDLKEKTVKEKHDESSDVE
KSSLEKEASCPKGEKLAEAASKDLRKKKAQEDSSSESTEKSAKKEHNFDSSNDRFKSKKG
SESKAKKSEKLKKKSYKEEQGDSSSDVEKPTPEKGSSNSSENDKTKNEAMFKEKKRRNLR
ERVSKRVQNDLSSDAEKSPLKEESSSEDDVQSKKQTETKEKKKISHKKKISKKEQNDSLS
SSDEESYEDSKKKIKRGSMKESKKSNLKKKVAKKKVVVTSSSSSDKEENDEQNSTGDGSS
DEQKIMPVTENLVLSAGTGFCQSSGDEGETKTRAVPMEEEEDDDDDDPENRIAKKMLLEE
IKANLSSDEDASSDDESDEGKKKTGKQNENTGDDEENEKEDNSESDSEEEEEGEEEESKK
PRYRHRLLRHKLTVSDGESGEEKKSKPKEKKEGKRRNRRKVSSDDSNDSEFHESAVSEEV
SESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENNNKSNSEDEDNDDSK
SPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKC
PITTKLVLDEDEETKEPLVQVHRNIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCI
LAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQECLEDDEKL
EVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDP
NT seq
4861 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcacttggacaaaattggtcgagagtagaaggtaaaagtagagaacctaaa
agtagtccagtttcaatggagaacaacagagaggagggcagtagttcttcagaaagaacc
aaatccttaggatcatcacgttcaaaaaggaaacccacagttgtaacaaaatatgttgga
tcagatgatgaacaggtcttagatgaaaccgtaaatgaagatatttcaaatgaaaactca
gaaaacgacgttgatatgaaaagcttgcctaaaggtacagtggttgtacagcctgagcca
gtgctgaatgaagacaaagatgattttaaagggcctgaatttagaagcagaaatgccgtt
aaaatgaaacctgaagctcccaaaaagcgtggagaggaaggactacatggaattgtaagc
tgtacagcttgtgggcaacaggtgaaccattttcaaaaggattcaatctatagacatcct
acactgaaagttcttatttgtaagacttgctacaagtattacatgagcgatgacattagc
cgtgattcagatggaatggatgaacagtgtagatggtgtgctgaaggtggaaatttgatt
tgctgtgacttttgccataacgccttctgtaaaaagtgcattttgcgcaacctgggtcga
aaggagctatcgaccatactggacgaaaataaccagtggcactgctatatttgccatcca
gagcctttgttggacttggtcactgcatgtgacagtgtctttgaaaatctagaacagtta
ctgcaacaaaacaaaaaaaagatcagagttgaaagtgaaaaaagtaaaatatatgaccat
acagtcaagttttctccaaagagaaataattcaaactgtaatggtgaaggaaaaaaccta
aatgattcatattcaggttcactaacgtattcttataaagcactagtggtgccaaaagac
ttgcttaagaaaacaagaaagttggttgaaactacaacaaatctgaattctagctttgta
agctttttgaaaaacgctgcagaaaatgtagaaataaccccatctgtgcaactttgtcag
ctaaaagcttttaaatctgtgttgagtgacatgaaaaaagctcatctggcactagaagaa
ggtctgaacctggagattcaagctttgaatgttaaaatcaaagataaaaataccaaagag
aaaaaacctggtgttagattagaaaaagatgaggtgaacaaagatggaaaggaacgtgtg
gcattaaaagagaatgacactgtaaagacacagaaaaaagttgtatcagaacggcctgac
ggtgagcccatggatcaaagtgttccggcaacggaacaagcaggtaacaaacgtacttct
ggtgaagagaaaaggtctggcagaaatgaagagcctcagtatgaacctaatagtacagag
gctttagacatggatatagtgtccatcccctcatctgttcctgaagatatttttgagact
ctagaatctgctatggagattcagattacttcagatgagcaagacagtggaaatacagga
acagatcatgagactccaaattcaaataccaaatcaaacactcctatgaaagataccaaa
ggtggtactaagttaaagtcatcggctaaaggaacaaaagaattgattgtaaaattgact
cccgtttccctttcagagtctgcagttaaagctgaagatcaagacagcagtctggaaaag
gacaggaaggatgttgatgcaatacctagagcagaaaactgtgattctgtaaaacagaac
cataatgctggcagtgaaccttccacggagaacgaaactgtctcacttgtagaggagtct
gatctgaggagatcaccgcgtgtgaagaccacacctctgaggcgccagacagacatcaat
cctttaacgtcaaattcagaagaagacagcaatgacacgtgtagtgaaaaacggaagaga
aaatcatcaaaacaaccaaggaggaaaaatgataaaagaaattcttctgacagtactgct
gatggtcctagccctaataaactttctaaatcaaaaacgccatacacgttagatcaaagc
tcagattctgacgagatgccagctgttcttaaagaagtagctatgatgagtcacagttct
tcagatattgatagcaatagtgaagcaccaacaaatgatcagaagactttagattttcta
cagactcagccagtaaaggatgaaaatggaaaacgaaaaagaaaaagttccagttctggt
tcagatttggacgctaaaagaggcaaatcagttaaaaattctgctgctgctaaaaagaaa
cgacaaaactattcagattcttcaaactatgattctgagttggaaaaagaaataaaaatt
ttgagtaaaattgagtctgcaaagaaagctaagaaaaaatactcacgaaaggatgatagt
tatgattcctctgaagaagagcagaggaagaaagtaagtagtaagagaaagataaatttg
aagaaacaaagagataaatcttctgaagatgacgatgctgaaaagtcttccccagagaag
gagattgatcattcttctaaagataaaaatggtaagggggcagctgctaaggaaaggcta
aacagagacttaaaagaaaaaactgtgaaggaaaagcacgatgagtcttctgatgttgag
aagtcttcactggagaaagaggcgagttgtccgaaaggtgaaaagctagctgaagctgcg
agcaaggatttgagaaagaaaaaagcacaggaagattcttcttcagagagtacggagaaa
tctgcaaagaaagagcacaattttgattcttcgaacgacagattcaagagtaaaaaagga
tcagagagcaaagcaaagaaatctgaaaaactgaaaaagaaaagttacaaggaagaacaa
ggtgattcctcttctgatgttgagaagccaactccagagaaaggaagtagcaattcttct
gagaacgacaaaactaaaaatgaagcaatgtttaaagaaaagaaaaggaggaatttaaga
gagagagtatccaaaagggtacagaacgatttatcctctgatgctgagaaatctccccta
aaagaggagagttcttctgaagatgatgtgcagagtaaaaaacaaacggaaactaaagaa
aagaaaaaaataagtcacaaaaagaaaatttccaagaaagaacagaatgactcattgtcc
tcttctgatgaggagtcttatgaagacagtaagaaaaagataaaaagagggtcaatgaaa
gaaagtaaaaagagtaacttaaaaaagaaagtggcaaaaaagaaggtggttgtcacgtcc
tcttcctcatccgataaggaagaaaatgatgaacagaattcaacaggtgacggaagcagt
gatgagcagaaaattatgccagtgactgaaaacttagtgctatctgctggtacaggattt
tgtcagtcatcaggagatgagggagagactaaaacaagggctgttccaatggaggaggag
gaagatgatgatgatgacgatcctgagaatagaattgccaagaaaatgcttttagaagaa
atcaaagccaatctttcctctgatgaggatgcatcttcagatgatgaatcggatgaagga
aaaaagaaaactggaaagcaaaatgaaaacacaggagatgatgaagagaatgaaaaggaa
gataattctgaatcggattcagaagaagaagaagaaggggaagaagaagaatcaaagaag
cctagatacagacacagactgctgaggcacaagctgacagtgagtgacggagagtctggt
gaagaaaaaaagtcgaaaccaaaagaaaaaaaagaagggaagcgcagaaatagaaggaaa
gtgagcagcgatgattcaaatgactccgagtttcatgaatctgcagttagtgaagaagtc
agtgagtctgaagacgaccaacgtccaagaacaagatctgccaagaaagctgaggcagaa
gaaaaccagcgcagttacaaacagaaaaagaaacgaaggcgtataaaggttcaagaggat
tcttcaagtgaaaacaacaataagagtaattctgaggatgaggacaatgatgattcaaaa
tctcctggaaaaggcaggaagaaaataaggaaaattattaaagacgataagcttagaaca
gaaacacaaaatgcacttaaagaagaagaagaaagaagaaaacgtatagcagaaagagaa
cgggagagagagaaattgagagaggtgatagagatagaagatgcttcacctctgaaatgt
cccattacaactaagctggttttagatgaagatgaagaaaccaaagaaccattagtgcag
gttcacaggaatatagttaccagactgaaaccacaccaagtagatggtgttcagttcatg
tgggattgctgttgtgagtctgtcaaaaaaacaaagacatctcctggttctggatgcatt
cttgctcactgtatgggtctggggaaaacgttacaggtagtaagttttcttcacactgtc
ttgctgtgtgacaagctggattttcggacagctctggtagtgtgtccgctgaacactgcc
ttgaactggttgaatgaatttgaaaaatggcaagaatgtttagaagatgatgaaaaacta
gaggtctgtgaactagcaactgtgaaacgccctcaagagagaagctatatgctccagcgt
tggcaagacgaaggaggtgtgatgataataggctatgagatgtatcgtaatcttgcacaa
ggcaggaatgtgaagagtagaaaacttaaagaaatatttaataaagctttagttgatcca
g
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